prot_H-paniculata_contig2467.6688.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2467.6688.1
Unique Nameprot_H-paniculata_contig2467.6688.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length405
Homology
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BLAST of mRNA_H-paniculata_contig2467.6688.1 vs. uniprot
Match: D7G695_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G695_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 5.900e-31
Identity = 78/176 (44.32%), Postives = 119/176 (67.61%), Query Frame = 0 
Query:   11 STRSRAVVDASDRAVTRERRNGG-DWKDGPSRLGRSDDDKVVTAAEKKKKLMYPIPSNISGVSAIPKIDARLDIREIEALSDMQPIERRD-PPGAIRSCLAPPMPKNSRHDRKVRRLKEWLKDSSTIQPELDAQKDAVARALEEDGTVEAEFEEWERWFMAIRSHLISARQPT-TW 183
            S+R+R   +  DRAVTR+RRN G DW++      + + +K V  A+K+KKL+  IP+ I GVSA+ + DAR DIREIEAL DMQ ++  +  PGA+++   PPMPK ++ + K  R+  W KD S ++ ++  Q++A+ +A EED  +EAE + WERW++ +R+HL + R+PT TW
Sbjct:   38 SSRARGRHNDGDRAVTRDRRNAGSDWRESLRNSRQEEMEKAV--ADKRKKLVRAIPTTIPGVSAVVRGDARSDIREIEALVDMQVLQPEEVAPGAVQATPRPPMPKANQLEPKRARMARWKKDPSEMEKDMAKQREALKKAEEEDEQLEAERDAWERWYLVLRAHLTAGRRPTATW 211
[Close]
BLAST of mRNA_H-paniculata_contig2467.6688.1 vs. uniprot
Match: A0A6H5KJ15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ15_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 5.270e-29
Identity = 81/200 (40.50%), Postives = 121/200 (60.50%), Query Frame = 0 
Query:    1 MADNRPVTRGSTRSRAVVDASDRAVTRERR---------------NGGDWKDGPSRLGRSDDDKVVTAAEKKKKLMYPIPSNISGVSAIPKIDARLDIREIEALSDMQPIERRD-PPGAIRSCLAPPMPKNSRHDRKVRRLKEWLKDSSTIQPELDAQKDAVARALEEDGTVEAEFEEWERWFMAIRSHLISARQPT-TW 183
            M D+ PV    TR R   +  DRAVTR+RR                G DW++      + + +K +  A+K+KKL+  IP+NI GVSA+ + DAR DIREIEAL DMQ ++  +  PGA+++   PPMPK ++ + K  R+  W KD S I+ ++  Q++A+ +A +ED  +EAE   WERW++ +R+HL + R+PT TW
Sbjct:    1 MVDSPPV----TRKRGRHNDGDRAVTRDRRLVSIVRTIIIGVLWNAGSDWRESLRNARQEEMEKAI--ADKRKKLVRAIPTNIPGVSAVVRGDARSDIREIEALVDMQVLQPEEVAPGAVQATPRPPMPKANQLEPKRARMARWKKDPSEIEKDMAKQREALKKAEKEDEQLEAERHAWERWYLVLRAHLTAGRRPTATW 194
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2467.6688.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G695_ECTSI5.900e-3144.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJ15_9PHAE5.270e-2940.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2467contigH-paniculata_contig2467:5251..16565 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2467.6688.1mRNA_H-paniculata_contig2467.6688.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2467 5019..16565 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2467.6688.1 ID=prot_H-paniculata_contig2467.6688.1|Name=mRNA_H-paniculata_contig2467.6688.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=405bp
MADNRPVTRGSTRSRAVVDASDRAVTRERRNGGDWKDGPSRLGRSDDDKV
VTAAEKKKKLMYPIPSNISGVSAIPKIDARLDIREIEALSDMQPIERRDP
PGAIRSCLAPPMPKNSRHDRKVRRLKEWLKDSSTIQPELDAQKDAVARAL
EEDGTVEAEFEEWERWFMAIRSHLISARQPTTWPSSSRANGGDPIAWLCS
NSSSSSSSSESDNDSDNDVKSSKTSSSVSNGRPAAAAAGVDDIPSSNNNN
NNNNNSSNHSKTRNNKGTSSTANKSNTTTGKAKALSSSSPVSRAAGAGAG
AGAGSPASSAITGRDSNSSAEDSTKADDEKEEEEGDESDEGDVPANSSAT
LTEEPFPDQDAAADSKDRNPSKTSADAKPPPPVAAAMATAATKGKVANGD
KNGSA
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