prot_H-paniculata_contig2463.6679.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2463.6679.1
Unique Nameprot_H-paniculata_contig2463.6679.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length67
Homology
BLAST of mRNA_H-paniculata_contig2463.6679.1 vs. uniprot
Match: A0A6H5KAI3_9PHAE (Chromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI3_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.430e-16
Identity = 36/63 (57.14%), Postives = 42/63 (66.67%), Query Frame = 0
Query:    4 FEVGDYVLTARVRKLGSTPKLVGTWTGPWRVMGGDSAHVKKVQGVVTGATKGVHAVRVRPYAD 66
            F VGDYV+ ARVR+ G TPKL  TWTGPWRV+     HV  VQ +V G  + VH  R+R YAD
Sbjct:   15 FTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYAD 77          
BLAST of mRNA_H-paniculata_contig2463.6679.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 2.320e-15
Identity = 36/63 (57.14%), Postives = 42/63 (66.67%), Query Frame = 0
Query:    4 FEVGDYVLTARVRKLGSTPKLVGTWTGPWRVMGGDSAHVKKVQGVVTGATKGVHAVRVRPYAD 66
            F VGDYV+ ARVR+ G TPKL  TWTGPWRV+     HV  VQ +V G  + VH  R+R YAD
Sbjct:  270 FTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYAD 332          
BLAST of mRNA_H-paniculata_contig2463.6679.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 2.650e-15
Identity = 36/63 (57.14%), Postives = 42/63 (66.67%), Query Frame = 0
Query:    4 FEVGDYVLTARVRKLGSTPKLVGTWTGPWRVMGGDSAHVKKVQGVVTGATKGVHAVRVRPYAD 66
            F VGDYV+ ARVR+ G TPKL  TWTGPWRV+     HV  VQ +V G  + VH  R+R YAD
Sbjct: 1493 FTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYAD 1555          
BLAST of mRNA_H-paniculata_contig2463.6679.1 vs. uniprot
Match: G4YEE3_PHYSP (Chromo domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YEE3_PHYSP)

HSP 1 Score: 53.5 bits (127), Expect = 8.360e-7
Identity = 27/64 (42.19%), Postives = 41/64 (64.06%), Query Frame = 0
Query:    3 NFEVGDYVLTARVRKLGSTPKLVGTWTGPWRVMGGDSAHVKKVQGVVTGATKGVHAVRVRPYAD 66
            NF +GDYVL  R+       KL   W GP+RV+G   A+  +++ +++GAT+ VHA R++ YAD
Sbjct:   27 NFHIGDYVLWPRIDSEVHVNKLAVKWIGPYRVIGAQ-ANSFEIEHLLSGATRRVHASRLKMYAD 89          
BLAST of mRNA_H-paniculata_contig2463.6679.1 vs. uniprot
Match: A0A6A3RMV0_9STRA (Chromo domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3RMV0_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 8.890e-7
Identity = 34/68 (50.00%), Postives = 44/68 (64.71%), Query Frame = 0
Query:    3 NFEVGDY-VLTARV-RKLG--STPKLVGTWTGPWRVMGGDSAHVKKVQGVVTGATKGVHAVRVRPYAD 66
            NF  GDY VL +RV  K G  S  KL+ TW GP+RV+  D  H   +Q ++TGA +GVHA R++ YAD
Sbjct:   27 NFTEGDYDVLRSRVDEKSGEKSGNKLIVTWVGPYRVLRAD-VHSFLIQHLITGAERGVHASRLKLYAD 93          
BLAST of mRNA_H-paniculata_contig2463.6679.1 vs. uniprot
Match: A0A6A3DG06_9STRA (Chromo domain-containing protein n=5 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3DG06_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 1.780e-6
Identity = 31/64 (48.44%), Postives = 41/64 (64.06%), Query Frame = 0
Query:    3 NFEVGDYVLTARVRKLGSTPKLVGTWTGPWRVMGGDSAHVKKVQGVVTGATKGVHAVRVRPYAD 66
            NF  GD VL +RV +  S  KL+ TW GP+RV+  D AH   +Q ++ GA  GVHA R++ YAD
Sbjct:  109 NFTEGDNVLRSRVDEK-SGNKLLVTWVGPYRVLRAD-AHSFLIQHLIMGAELGVHATRLKFYAD 170          
BLAST of mRNA_H-paniculata_contig2463.6679.1 vs. uniprot
Match: A0A6A3QFJ8_9STRA (Chromo domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3QFJ8_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 2.310e-6
Identity = 31/64 (48.44%), Postives = 41/64 (64.06%), Query Frame = 0
Query:    3 NFEVGDYVLTARVRKLGSTPKLVGTWTGPWRVMGGDSAHVKKVQGVVTGATKGVHAVRVRPYAD 66
            NF  GD VL +RV +  S  KL+ TW GP+RV+  D AH   +Q ++ GA  GVHA R++ YAD
Sbjct:  109 NFTEGDNVLRSRVDEK-SGNKLLVTWVGPYRVLRAD-AHSFLIQHLIMGAELGVHATRLKFYAD 170          
BLAST of mRNA_H-paniculata_contig2463.6679.1 vs. uniprot
Match: A0A329RHF8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RHF8_9STRA)

HSP 1 Score: 47.0 bits (110), Expect = 5.700e-5
Identity = 27/64 (42.19%), Postives = 41/64 (64.06%), Query Frame = 0
Query:    3 NFEVGDYVLTARVRKLGSTPKLVGTWTGPWRVMGGDSAHVKKVQGVVTGATKGVHAVRVRPYAD 66
            NF++GD+V+ +R+ +     K +G+   P++V   D AH  KVQ +VTG   GVHA R++ YAD
Sbjct:   10 NFDIGDFVMWSRIDQRLPNRKFLGS---PFKVTD-DLAHSFKVQHLVTGREYGVHASRLKCYAD 69          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2463.6679.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KAI3_9PHAE1.430e-1657.14Chromo domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JVS6_9PHAE2.320e-1557.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7F6_9PHAE2.650e-1557.14Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
G4YEE3_PHYSP8.360e-742.19Chromo domain-containing protein n=1 Tax=Phytophth... [more]
A0A6A3RMV0_9STRA8.890e-750.00Chromo domain-containing protein n=3 Tax=Phytophth... [more]
A0A6A3DG06_9STRA1.780e-648.44Chromo domain-containing protein n=5 Tax=Phytophth... [more]
A0A6A3QFJ8_9STRA2.310e-648.44Chromo domain-containing protein n=3 Tax=Phytophth... [more]
A0A329RHF8_9STRA5.700e-542.19Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2463contigH-paniculata_contig2463:9463..9663 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2463.6679.1mRNA_H-paniculata_contig2463.6679.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2463 9454..9879 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2463.6679.1 ID=prot_H-paniculata_contig2463.6679.1|Name=mRNA_H-paniculata_contig2463.6679.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=67bp
MANFEVGDYVLTARVRKLGSTPKLVGTWTGPWRVMGGDSAHVKKVQGVVT
GATKGVHAVRVRPYAD*
back to top