prot_H-paniculata_contig2461.6676.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2461.6676.1
Unique Nameprot_H-paniculata_contig2461.6676.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length840
Homology
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BLAST of mRNA_H-paniculata_contig2461.6676.1 vs. uniprot
Match: A0A6H5KW23_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW23_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 2.510e-14
Identity = 72/101 (71.29%), Postives = 87/101 (86.14%), Query Frame = 0 
Query:  196 VPADMIDLRNHFQATPLHRAAAKGHAEVISILLRNGADVNARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAQGSITPLMAARKPEVRERIKEALSK 296
            +P++++D+RNHF ATPLHRAAAKGHAEV+++L++NGA V   XXXXXXXXXXXXXXXXXXXXXXXXXXX     KAQ  +TPL+AARKPEVRE +K+AL K
Sbjct:  336 LPSEVVDIRNHFHATPLHRAAAKGHAEVVTMLVQNGASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPAIKAQQGVTPLIAARKPEVRELLKKALEK 436
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BLAST of mRNA_H-paniculata_contig2461.6676.1 vs. uniprot
Match: D8LSH4_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH4_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 7.030e-10
Identity = 65/90 (72.22%), Postives = 78/90 (86.67%), Query Frame = 0 
Query:  196 VPADMIDLRNHFQATPLHRAAAKGHAEVISILLRNGADVNARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAQGSITPLMAARKPE 285
            +P++++D+RNHF ATPLHRAAAKGHAEV+++L++NGA V   XXXXXXXXXXXXXXXXXXXXXXXXXXX     KAQ  +TPL+AARKPE
Sbjct:  353 LPSEVVDIRNHFHATPLHRAAAKGHAEVVTMLVQNGASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPAIKAQQGVTPLIAARKPE 442
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2461.6676.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KW23_9PHAE2.510e-1471.29Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LSH4_ECTSI7.030e-1072.22Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 223..237
score: 40.18
coord: 90..105
score: 40.39
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 56..85
e-value: 0.018
score: 24.2
coord: 240..269
e-value: 1.3E-4
score: 31.3
coord: 122..151
e-value: 43.0
score: 13.0
coord: 89..118
e-value: 3.8E-4
score: 29.8
coord: 207..236
e-value: 2.7E-5
score: 33.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 89..121
score: 12.129
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 56..88
score: 10.018
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 240..272
score: 11.22
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 207..239
score: 14.666
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 190..301
e-value: 5.8E-27
score: 96.2
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 43..163
e-value: 1.5E-26
score: 95.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 51..288
NoneNo IPR availablePFAMPF13857Ank_5coord: 52..97
e-value: 1.7E-8
score: 34.5
NoneNo IPR availablePANTHERPTHR24180:SF1526S PROTEASOME REGULATORY SUBUNIT P28-RELATEDcoord: 119..285
coord: 52..138
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 119..285
coord: 52..138
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 53..840
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 36..48
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..52
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 49..52
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 204..270
e-value: 2.9E-12
score: 47.0
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 56..281
score: 42.839

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2461contigH-paniculata_contig2461:1200..8143 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2461.6676.1mRNA_H-paniculata_contig2461.6676.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2461 104..8143 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2461.6676.1 ID=prot_H-paniculata_contig2461.6676.1|Name=mRNA_H-paniculata_contig2461.6676.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=840bp
MMTSQLSNVDSIMTSPPILTPSMFDLRRCLCRPLSLSLSLSLWLALMLTQ
QAQDYDGNTSLIWAAKGGHRSCVAVILDYGASTTTPDENGNTALHFACQT
GHASVASDLLDRGALPTAQDYWEFTPFHRACSQGHGNVLKELLKTRTFRD
NGNGDGEGDGRCSGSMSTDSGGWGASVAGWGYGELSAEPVVAHSLVPADM
IDLRNHFQATPLHRAAAKGHAEVISILLRNGADVNARDGFFYTPLHLACI
NGALACVEVLLENGADPSTKAQGSITPLMAARKPEVRERIKEALSKWDPA
KSGVGGPLLARHGSTSDVSDDAGMYVSVDLTLSVDGSSSGDEMETAPQEG
GVDHKGRDNGKSRTLGGMGLLSSNTTAVTGSVASFSCSNSFKPPLVSRRL
SETINSVIQVDSASAAAPTAAGGPKGGPVTVKNLASGLPRGRSWSSSVCD
DSQSFVAGMDIEDPGWNRPIIPDPRVVAAAAGTAAGAGATGTRARNYEPQ
QEWGRPRRVSTGSVLNKLFSSALSKKHGLATSDGHVSLETGGGSRDAGDG
KGSDGDGDPVLAPAKAATAVGGAAAASQSKRQEHTGGEKSTLTKGKGSAS
IMLGTPSATRNDGDADNTDDFDTWRTSAAAAVVIPPPPPTDLFQPPPESM
LHTAPRQKSPSSTLGVILAQPPYSMLPDDAAAADDKSSTTTTTTTASAET
PPTAEAPAFTAPASHGVGDGVLSMSQTLQQTAQLTEVVQHKGKGCITPAA
VAAAGGARKTTDDCDEGRRMYSGRQAPGKRRAKSLPPFWPDDERRARRRR
GGEPRPPRKKIEHRPSMLGPTAVIENLSLDDADVDEGAAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom