mRNA_H-paniculata_contig2459.6671.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2459.6671.1 vs. uniprot
Match: A0A6H5JRT4_9PHAE (Peptidase A1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRT4_9PHAE) HSP 1 Score: 479 bits (1233), Expect = 1.480e-145 Identity = 301/673 (44.73%), Postives = 400/673 (59.44%), Query Frame = 2
Query: 512 MQIQCSFQIYHVYSCLVFVFVRGV---EVNLFCPQLASYLAGSYMKTTN*NLHFSISLAVVLQERTFSLCFSLNGGTMVLGGYDERLNKPGVEMQFTPLTKDSGWFTVKVLKITLDDVSIAHDSSVYQKGKGTIVDSGTTDTYLPRSVATGFSKAWQASTGKPYKACASNDFCMKLTPSELNALPTLTIHLDNGVMINVLPEAYMDPLGKDNAYAPRIYMEESMGAVLGANVMRDHNVVFDYDNHRMGFAEGVCDYTVAPKRQEENPPQVSGVVEVVV---------DCVTAKEQATPCDVACPFGLAAARTIVGHEK---WVDVVVTPAQGTGKSCPDQLVEESRECSKDCP------KGAPNPMAEDEINVDNRGXXXXXXXXXXXXXXXXXXXXXXXXXXQQLGCLLEQEIWTPCSESCLQEKYMDEDCEKEPEARPCHVGDLCTTSKMGLILKMDMTLRLDMMEEGDELVQDIVGERGPVWIIWIGIAVSNTVASLLSEVPAGDIETSVAI-NPQAVEKGEDGRAKVA---CTAEVTIHLTPKVDNNLANRAMSVLNIPSLSEKLTAVHKEAAHPSSLGGSSGATYV--GFYTTFVSTERAAMFIASNMEPYLPPVNDRLQAS----AISRGPQFKFQATPEMLAVFAALAGVVLAVYA-IGARAKHLR 2434
+ +Q S +I H S F+ G + LF QLA + G M + L + ++ A ++ERTFSLCF NGGTMVLGGYD RLNKPG EM +TP TK SGWFTVKV IT++ VSIA D++++QKGKG IVDSGTTDTYLP+SVA GFS AW+ +TG PY C N FCM LT +EL ALPT+TIH+D G+ +NV P YMD LGKDNAYAPRIY+ ESMG VLGANVM DHNVVFD+DNH +GFAEGVCDY + +N GVV + DCVTAK++ C+ +CP GL I G+E W DV++T +G+GK+CPD + +E REC +DCP +G E D XXXXXXXX + C ++QE+WT CS CLQE+++D+ C KE EAR C++G++C TSK GL+L + + L++D+ + G + E +W+ W+G V++ VA L S + AG++E +V +P+A + G A A C A+V +HLTPKVDN A++ V N + S + AA L + ++ G T VS ++FIASN E Y P ++RLQ++ ++S G A P+ + LAGVV AV A + R KHLR
Sbjct: 222 LTLQQSEKINHDESAYAVEFMFGCIESQTGLFKTQLADGIMG--MSADSHTLVWQLAKAGKIKERTFSLCFGKNGGTMVLGGYDNRLNKPGHEMVYTPSTKSSGWFTVKVTDITVNQVSIAKDAAIFQKGKGIIVDSGTTDTYLPKSVAKGFSAAWERATGSPYANCKDNHFCMILTSAELEALPTITIHMDGGLEVNVRPSGYMDALGKDNAYAPRIYLTESMGGVLGANVMLDHNVVFDFDNHSVGFAEGVCDY------RADNQGSAPGVVGAQLAQEEVPADEDCVTAKKRVQKCNASCPKGLEEPEAIKGNEACCIWEDVIITRPKGSGKACPDAMEKEIRECVEDCPADPRVLEGGKKAAKE---GGDGEKXXXXXXXXGEPAVELVVRAGGVESSTHETYCSIDQELWTECSLDCLQERFLDDACGKEAEARGCNLGNVCPTSKTGLLLSVGVGLKIDVGDAG------VSEEHSKLWLAWLGTTVADAVAELTS-LAAGNVEATVTCTDPRAADIAAFGGAAAASFDCEAKVEMHLTPKVDNVAADKVTQVFNNGTGSSSSFSASLSAA----LQWTKRQRWLLSGVTVTAVSAGPVSVFIASNGEAYHPHESNRLQSAKPVGSVSGG------AGPQGGRLMLTLAGVVFAVLAALMLRVKHLR 866
BLAST of mRNA_H-paniculata_contig2459.6671.1 vs. uniprot
Match: A0A6H5LNK8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LNK8_9PHAE) HSP 1 Score: 324 bits (831), Expect = 7.420e-94 Identity = 168/317 (53.00%), Postives = 207/317 (65.30%), Query Frame = 2
Query: 590 NLFCPQLASYLAGSYMKTTN*NLHFSISLAVVLQERTFSLCFSLNGGTMVLGGYDERLNKPGVEMQFTPLTKDSGWFTVKVLKITLDDVSIAHDSSVYQKGKGTIVDSGTTDTYLPRSVATGFSKAWQASTGKPYKACASNDFCMKLTPSELNALPTLTIHLDNGVMINVLPEAYMDPLGKD-NAYAPRIYMEESMGAVLGANVMRDHNVVFDYDNHRMGFAEGVCDYTVAPKRQEENPPQVSG----VVEVVVDCVTAKEQATPCDVACPFGLAAARTIVGHEKWVDVVVTPAQGTGKSCPDQLVEESRECSKDCP 1525
LF QLA + G + + L ++ A + ER FSLCFS GGTMV+GGYD LNKPG EMQ+TP T ++ TVKV +TL+ VSI D+SV+QKG G V SGTTD YLPR+VA GFS AW+A+TG PY C SN+FCM T ++L LP LTIH+D GV +NV PEAYMD D NAYAPRIY+ ESMG LGA + RDHNVVFDYDNH +GFA+G CDY + + G E VDCVTA ++ CD CP G + T GHE WVD ++T QG+G++CP+++ EE R C KDCP
Sbjct: 233 GLFRTQLADGIMG--LNADSRTLITQLATAGKISERKFSLCFSETGGTMVIGGYDPLLNKPGSEMQYTPSTGETSAPTVKVTDVTLNGVSITTDASVFQKGTGIKVVSGTTDMYLPRAVAEGFSAAWEAATGSPYATCKSNEFCMTRTTADLETLPVLTIHMDGGVEVNVQPEAYMDASSDDENAYAPRIYLTESMGGELGAILFRDHNVVFDYDNHVVGFADGACDYHADSRGSDGGRAGAKGGPAVEAEANVDCVTAVKRVEECDAECPTGQSEPSTAEGHEIWVDEIITHPQGSGQACPEKMAEERRGCVKDCP 547
BLAST of mRNA_H-paniculata_contig2459.6671.1 vs. uniprot
Match: A0A7S3YC94_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YC94_HETAK) HSP 1 Score: 198 bits (503), Expect = 8.730e-51 Identity = 128/323 (39.63%), Postives = 175/323 (54.18%), Query Frame = 2
Query: 575 RGVEVNLFCPQLASYLAGSYMKTTN*NLHFSISLAV----VLQERTFSLCFSLNGGTMVLGGYDERLNKPGVEMQFTPLTKDSGWFTVKVLKITLDDVSIAHDSSVYQKGKGTIVDSGTTDTYLPRSVATGFSKAWQASTGKPYKACASNDFCMKLTPSELNALPTLTIHLDNGVMINVLPEAYMDPLGKDNAYAPRIYMEESMGAVLGANVMRDHNVVFDYDNHRMGFAEGVCDYTVAPKRQEENPPQVSGVVEVVVDC-VTAKEQATPCDVACPFGLAAARTIVGHEKWVDVVVTPAQGTG-KSCP-DQLVEESRECSKDC 1522
+ E LF QLA + G M HFS+ A+ + F++CF+ GG M LGG D RL+ MQF PLT+++GWFTV + +I + + +S Y GKGTIVDSGTTDTYL R VA F W A++G Y A L+ ++L ALP++T NGV + V PE+YM+ G N Y PRIY++ES G VLGAN M H+V FD +N R+GFAE CD V + ++ DC V+ E A CD C G A + G E W VV+ P +G G + CP ++ + +++ C+ DC
Sbjct: 184 QSSETGLFRTQLADGIMGMSMS------HFSLVDALHKAGAVGHNNFAMCFNEEGGVMSLGGVDTRLHDS--PMQFVPLTQNTGWFTVSLKEIRVGGEKLNVGASNYNGGKGTIVDSGTTDTYLNRHVANEFKAKWHAASGMTYSNAAKT-----LSEAQLAALPSVTYVFGNGVEVVVRPESYMEKTGT-NKYTPRIYLDESSGNVLGANFMDRHDVFFDEENGRVGFAESSCDMGVIGRATDQ-------------DCEVSEPELAQACDATCAPGQVGAAS--GVEVWESVVLRPQRGAGSRPCPAEEDLVKTKACALDC 477
BLAST of mRNA_H-paniculata_contig2459.6671.1 vs. uniprot
Match: A0A835ZHP7_9STRA (Aspartic peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHP7_9STRA) HSP 1 Score: 182 bits (463), Expect = 2.580e-45 Identity = 105/232 (45.26%), Postives = 135/232 (58.19%), Query Frame = 2
Query: 584 EVNLFCPQLASYLAGSYMKTTN*NLHFSISLAVVLQERTFSLCFSLNGGTMVLGGYDERLNKPGVEMQFTPLTKDSGWFTVKVLKITLDDVSIAHDSSVYQKGKGTIVDSGTTDTYLPRSVATGFSKAWQASTGKPYKACASNDFCMKLTPSELNALPTLTIHLDNGVMINVLPEAYMDPLGKDNA--YAPRIYMEESMGAVLGANVMRDHNVVFDYDNHRMGFAEGVCDYT 1273
+ LF QLA + G M + L + + +L + FSLCF GG MVLGG + L MQ+TP D GWFTV + I + SI D + Y +GKG IVDSGTTDTYLP + A GF WQA TG Y ++ MKL+ ++ ALPT T GV ++V PEAYMD + Y PR+Y++E GAVLGAN MRDH+VVFD+ N R+GFA CD++
Sbjct: 135 QTGLFNTQLADGIMG--MSVSEFTLVWQLHQKGLLAQEKFSLCFDYGGGVMVLGGVEPLLRT--APMQYTPNLHDEGWFTVDLQDILIGGESINVDPAQYNRGKGVIVDSGTTDTYLPSACADGFRAQWQALTGMAY-----DNKPMKLSKAQFAALPTFTFVFAGGVRVDVKPEAYMDVAADHDGAGYTPRMYLDERDGAVLGANFMRDHDVVFDHANKRVGFAPANCDWS 357
BLAST of mRNA_H-paniculata_contig2459.6671.1 vs. uniprot
Match: A0A6H5LN99_9PHAE (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN99_9PHAE) HSP 1 Score: 189 bits (481), Expect = 5.800e-45 Identity = 102/200 (51.00%), Postives = 128/200 (64.00%), Query Frame = 2
Query: 689 QERTFSLCFSLNGGTMVLGGYDERLNKPGVEMQFTPLTKDSGWFTVKVLKITLDDVSI--AHDSSVYQKGKGTIVDSGTTDTYLPRSVATGFSKAWQASTGKPYKACASNDFCMKLTPSELNALPTLTIHLDNGVMINVLPEAYMDP---LGKDNA--YAPRIYMEESMGAVLGANVMRDHNVVFDYDNHRMGFAEGVCD 1267
Q+R FS+CFS NGG +VLGGYD L PG Q+T G+F V+VL + L SI A ++ G GTIVDSGTTD YLP VA FS+AW+A+TG+PY C N FC+KLTP E LP ++ L +GV + V P Y++ GK + YAPRIY+ ES GAVLGANVM D NV+FD N R+GFA+ C+
Sbjct: 320 QDRKFSICFSENGGNLVLGGYDPELLVPGASHQYTTAQFARGFFAVEVLGVALGGRSIVTAETLELFSLGTGTIVDSGTTDMYLPVEVADAFSEAWEAATGEPYAMCPGNSFCLKLTPPEAAELPVVSFTLADGVEVRVSPLQYLEKKETAGKPHKTYYAPRIYLTESTGAVLGANVMLDRNVLFDLANERIGFADARCE 519
BLAST of mRNA_H-paniculata_contig2459.6671.1 vs. uniprot
Match: A0A4D9CR18_9STRA (Peptidase A1 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR18_9STRA) HSP 1 Score: 183 bits (464), Expect = 2.080e-43 Identity = 147/455 (32.31%), Postives = 209/455 (45.93%), Query Frame = 2
Query: 563 FVF-VRGVEVNLFCPQLASYLAG-SYMKTTN*NLHFSISLAVVLQERTFSLCFSLNGGTMVLGGYD-ERLNKPGVEMQFTPLTKDSGWFTVKVLKITLDDVSIAHDSSVYQKGKGTIVDSGTTDTYLPRSVATGFSKAWQASTGKPYKACASNDFCMKLTPSELNALPTLTIHLDNGVMINVLPEAYMDPLGKDNAYAPRIYMEESMGAVLGANVMRDHNVVFDYDNHRMGFAEGVCDYTVAPKRQEENP-PQVSGVVEVV-------VDCVTAK-EQATPCDVACPFGLAAARTIVGHEKWVDVVVTPAQGTGKSCPD-QLVEESRECSKDCPKG-APNPMAEDEINVDNRGXXXXXXXXXXXXXXXXXXXXXXXXXXQQLGCLLEQEIWTPCSESCLQ--------EKYMDEDCEKEPEARPCHVGDLCTTSKMGLILKMDMTLRLDMM-EEG 1858
FVF + E LF QL + + G S+ T + + A + FSLCF+ +GG+M +GGY+ E KP +Q+ PLTK +GW+TV + I + + SI D +V+ G+GTIVDSGTTDTYLPRSVA+ F + +Q G Y + + M+L+PSE+ ALP L LDNGV + + E Y++ + + A ++++ GAVLGAN MR +VVF+ D+ ++GFA C Y E +P P VS +DC A + C CP A + G +K + PA G GK+CP L E++ C C AP D V +W PC SC Q E+ C K RPC G C ++ G ++ + L D + EEG
Sbjct: 223 FVFGCQTYETGLFRTQLENGIMGLSFQDLT---IVPKLREAGKIDATVFSLCFTEDGGSMRIGGYETEHHTKP---LQWVPLTKPTGWYTVTLKDIKIGNTSIGVDPNVFNAGQGTIVDSGTTDTYLPRSVASAFQRVFQDVAGVAYSSRS-----MRLSPSEMEALPPLVFVLDNGVEVPMPRENYLECMENGASCAGSVFLDNGSGAVLGANFMRGQDVVFNLDDKQIGFAPASCAYVEG----ESSPAPVVSTAAASAGEDGKEDLDCEMAVGDPVGECSAVCPGDGKEAGVLEGEQKMEMKISRPASGNGKACPPLPLKEKTVPCQVTCNGTVAPAGKGSDAAPVTTCSNAV---------------------------------VWGPCDASCQQTGEAMERKEEQGVVSCHKTTRNRPCATGLACPAAQEGSVMDVVFVLEGDGLGEEG 629
BLAST of mRNA_H-paniculata_contig2459.6671.1 vs. uniprot
Match: A0A835ZJF3_9STRA (Aspartic peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJF3_9STRA) HSP 1 Score: 182 bits (462), Expect = 2.950e-43 Identity = 140/452 (30.97%), Postives = 187/452 (41.37%), Query Frame = 2
Query: 584 EVNLFCPQLASYLAGSYMKTTN*NLHFSISLAVVLQERTFSLCFSLNGGTMVLGGYDERLNKPGVEMQFTPLTKDSGWFTVKVLKITLDDVSIAHDSSVYQKGKGTIVDSGTTDTYLPRSVATGFSKAWQASTGKPYKACASNDFCMKLTPSELNALPTLTIHLDNGVMINVLPEAYM----------------DPLGKDNAYAPRIYMEESMGAVLGANVMRDHNVVFDYDNHRMGFAEGVCDYTV-------APKRQEENPPQ------VSGVVEVVVDCVTAKEQAT--PCDVACPF-GLAAARTIVGHEKWVDVVVTPAQGTGKSCPDQLVEESRECSKDCPKGAPNPMAEDEINVDNRGXXXXXXXXXXXXXXXXXXXXXXXXXXQQLGCLLEQEIWTPCSESCLQEKYMDEDCEKE--PEARPCHVGDLCTTSKMGLILKMDMTLR 1837
+ LF QLA + G M + L +++ A + SLCF GG MVLGG D L+ MQFTP K +GWFTV ++ + + SI ++VY +GKG IVDSGTTDTYLP + A F AW+A+TG+ Y A +L +EL ALP LT G ++VLPEAYM + +GK +Y R+Y++E+ GAVLGAN MRDH+V FD N R+GFA C++T A PP C A PCD C + A T G E W C E +R+C+ C G G W C E C Q + + + + R CH G C ++MGL++ LR
Sbjct: 131 QTGLFNTQLADGIMG--MSASESTLVWTLHRAHRVPALALSLCFGTGGGAMVLGGSDPLLHT--APMQFTPSLKRTGWFTVDLIDVQIGGASIGAPAAVYARGKGAIVDSGTTDTYLPEACAARFRAAWRAATGRDYSESAPQ----RLARAELAALPALTFVFRGGARVDVLPEAYMVARAALTLTRLAASAQEKVGK--SYVARVYLDEANGAVLGANFMRDHDVFFDQANSRVGFAPANCNWTALEAAKAAAVAAATSEPPADXXXXXXXXXXXXAAACALAPNMQLLQPCDALCTDEDIKAGATAEGVETWGQTFANGGAARRPGCAAPRTE-ARQCAVRCGGGGG-------------------------------------------GVQCAATAWRACDERCEQARVWRREADGACLQQRRECHTGAHCAAARMGLLVTARALLR 528
BLAST of mRNA_H-paniculata_contig2459.6671.1 vs. uniprot
Match: A0A8J2SW55_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SW55_9STRA) HSP 1 Score: 168 bits (426), Expect = 4.300e-41 Identity = 100/237 (42.19%), Postives = 132/237 (55.70%), Query Frame = 2
Query: 563 FVF-VRGVEVNLFCPQLASYLAGSYMKTTN*NLHFSISLAVVLQERTFSLCFSLNGGTMVLGGYDERLNKPGVEMQFTPLTKDSGWFTVKVLKITLDDVSIAHDSSVYQKGKGTIVDSGTTDTYLPRSVATGFSKAWQASTGKPYKACASNDFCMKLTPSELNALPTLTIHLDNGVMINVLPEAYMDPLGKDNAYAPRIYMEESMGAVLGANVMRDHNVVFDYDNHRMGFAEGVCDY 1270
FVF + E LF Q A + G M L ++ A L +F++CF GGTM LGG D R++K MQF PL K+SGWFTV++ + L+ SI S + GKGTIVDSGTTDTYLPR A F +AW A+ G K S + T ++ PT+T GV ++V +AYM+ G + PR+Y+ E+ G VLGAN M DH+ FD + R+GFA CDY
Sbjct: 211 FVFGCQTYETGLFRTQKADGIMGMSMHAQT--LVPTMRSANKLGHNSFAMCFMQGGGTMALGGVDTRIHKE--PMQFVPLAKNSGWFTVQLKDVLLNGKSIGVPESTWNTGKGTIVDSGTTDTYLPRRAAEQFKRAWHAAMGPSPKYANSK---LAYTAAQAAKFPTITYVFAGGVKVDVEGKAYMEKAGAGR-WVPRVYLTEASGTVLGANFMEDHDCFFDAERRRVGFARADCDY 439
BLAST of mRNA_H-paniculata_contig2459.6671.1 vs. uniprot
Match: A0A7S2WCI1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCI1_9STRA) HSP 1 Score: 168 bits (426), Expect = 2.990e-40 Identity = 94/233 (40.34%), Postives = 131/233 (56.22%), Query Frame = 2
Query: 584 EVNLFCPQLASYLAGSYMKTTN*NLHFSISLAVVLQERTFSLCFSLNGGTMVLGGYDERLNKPGVEMQFTPLTKDSGWFTVKVLKITLDDVSIAHDSSVYQKGKGTIVDSGTTDTYLPRSVATGFSKAWQASTGKPYKACASNDFCMKLTPSELNALPTLTIHLDNG----VMINVLPEAYMDPLGKDNAYAPRIYMEESMGAVLGANVMRDHNVVFDYDNHRMGFAEGVCDY 1270
E LF Q A + G T L + A +++ +TF+LCF GG M +GG D +++ M+F PL K SGWFTVK+ + + DVS++ + Y GKG IVDSGTTDTYLP+ A F KAW++ +G+ Y + M L +PT+T V +++ P AYM+ G D Y PR+Y+ E G VLGAN M+DHNV+FD ++ R+GFA C Y
Sbjct: 209 ETGLFRTQRADGIMGLSSSPTT--LIPQVKNANLIEAKTFALCFMKGGGMMTIGGADSAIHQE--PMKFVPLAKSSGWFTVKLKGLRVGDVSLSVSGNSYNSGKGVIVDSGTTDTYLPKKAAGAFKKAWRSLSGREY-----GNGKMTLDAENFARIPTITFVFQGAHGEDVEVHMRPNAYMEQQGSDK-YVPRVYLTEGSGMVLGANFMQDHNVLFDAEHKRVGFARSDCSY 431
BLAST of mRNA_H-paniculata_contig2459.6671.1 vs. uniprot
Match: A0A7R9U4S4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4S4_9STRA) HSP 1 Score: 162 bits (409), Expect = 5.860e-39 Identity = 102/237 (43.04%), Postives = 142/237 (59.92%), Query Frame = 2
Query: 584 EVNLFCPQLASYLAGSYMKTTN*NLHFSISLAVVLQERTFSLCFSLNGGTMVLGGYDERLNKPGVEMQFTP-LTKDSGWFTVKVLKITLDDVSIAHDSSVYQKG--KGTIVDSGTTDTYLPRSVATGFSKAWQASTGKPYKACASNDFCMKLTPSELNALPTLTIHL--DNG---VMINVLPEAYMDPLGKDNAYAPRIYMEESMGAVLGANVMRDHNVVFDYDNHRMGFAEGVCDY 1270
E LF QLA + G M + NL + + L R+FSLCF L GG M LGG D +L+ +M++ + K GW+TV+VL I + D +A SVY G KG IVDSGTTDTYLPR+ AT F +AWQ +TG + A ++L+ SE+ ALP + +HL D G V++++ P YM+ + D +Y RIY++E G VLGAN MR H+V FD + +R+GFA C++
Sbjct: 171 ETGLFITQLADGIMG--MMISESNLASQLQIQGKLSSRSFSLCFVLGGGVMTLGGVDTQLHIE--DMRYVKNVQKGRGWYTVEVLDIFIGDERVAVAKSVYDNGSGKGMIVDSGTTDTYLPRACATKFKEAWQRATGMRFTNNA-----LQLSRSEMLALPKIHVHLSGDGGNPPVVVDMSPIDYME-VQNDFSYIARIYLDEPQGGVLGANFMRSHDVHFDPEANRIGFAPSDCNF 397 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2459.6671.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2459.6671.1 >prot_H-paniculata_contig2459.6671.1 ID=prot_H-paniculata_contig2459.6671.1|Name=mRNA_H-paniculata_contig2459.6671.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=649bp MVLGGYDERLNKPGVEMQFTPLTKDSGWFTVKVLKITLDDVSIAHDSSVYback to top mRNA from alignment at H-paniculata_contig2459:49..11544+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2459.6671.1 ID=mRNA_H-paniculata_contig2459.6671.1|Name=mRNA_H-paniculata_contig2459.6671.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11496bp|location=Sequence derived from alignment at H-paniculata_contig2459:49..11544+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2459:49..11544+ >mRNA_H-paniculata_contig2459.6671.1 ID=mRNA_H-paniculata_contig2459.6671.1|Name=mRNA_H-paniculata_contig2459.6671.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3894bp|location=Sequence derived from alignment at H-paniculata_contig2459:49..11544+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |