prot_H-paniculata_contig2457.6660.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2457.6660.1
Unique Nameprot_H-paniculata_contig2457.6660.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length226
Homology
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BLAST of mRNA_H-paniculata_contig2457.6660.1 vs. uniprot
Match: D8LFE7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE7_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 1.520e-19
Identity = 50/86 (58.14%), Postives = 62/86 (72.09%), Query Frame = 0 
Query:  140 RNMKASRAAMYAEEELVKRMKHLLENREESKAIKRTQGKHIRAKVLESMQQAKSFDDQLGAAGQWGMSKRTVELAKLGLEDCKSGQ 225
            R  +  R   YAEE L +RM HLL  R+ +KAIKR Q K I+AK+ E M +   F+++LG AGQWG SKR+VELAKLGLEDC+SGQ
Sbjct:  426 RRRQPRRQVDYAEEALTERMAHLLSQRDRTKAIKRAQQKAIKAKLAEMMYETHKFEEELGGAGQWGSSKRSVELAKLGLEDCRSGQ 511
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2457.6660.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFE7_ECTSI1.520e-1958.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2457contigH-paniculata_contig2457:283..3947 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2457.6660.1mRNA_H-paniculata_contig2457.6660.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2457 283..3948 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2457.6660.1 ID=prot_H-paniculata_contig2457.6660.1|Name=mRNA_H-paniculata_contig2457.6660.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=226bp
YSKYFSSQEGLRNAREILMLGFMSEQESAEVAERHTLDLTRRRRLRKMIK
HRKRNKERNRKQNARLIATGARLKLEGVVYVQGHRWAQSSDWNRKPGTHP
DQIATTGQSLVQANRVSSPAARDVGPLTNGVDAVDTRIARNMKASRAAMY
AEEELVKRMKHLLENREESKAIKRTQGKHIRAKVLESMQQAKSFDDQLGA
AGQWGMSKRTVELAKLGLEDCKSGQA
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