mRNA_H-paniculata_contig2455.6655.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2455.6655.1
Unique NamemRNA_H-paniculata_contig2455.6655.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2455.6655.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 3.880e-43
Identity = 83/204 (40.69%), Postives = 115/204 (56.37%), Query Frame = 3
Query:  807 GMAGAVNDKSIVCFDKTVQAVREGEPYRSMAYKLRDKDGVEQVEKSLCLIVDGEYYRWRNLACRAEEVAAREEIAWIKRLESVRKDVGCFFGILKGRFRILNLPIVFRESAQVDNVVWTCCILHNMLHSFDGLKLHEPNMDCAGPDGLLDAWLHEDRTMNFGTNGRNSNGPPERVEVENGFFAMRRRPGTHYTYRVENNEVAWL 1418
            G  G+ NDKSI+ +D  V  +RE   Y    + + + DG     K   L+VD  Y++W  L   ++    + ++A+ KRLESVRKDV CFFGI+KG FRIL L I + +   +DNV +TCCILHNMLHS+D     E   + AG  GL +AW H           + S+   E VEVE+GF   R++    + YR   N++AWL
Sbjct:   37 GFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 240          
BLAST of mRNA_H-paniculata_contig2455.6655.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 1.120e-41
Identity = 84/204 (41.18%), Postives = 116/204 (56.86%), Query Frame = 3
Query:  807 GMAGAVNDKSIVCFDKTVQAVREGEPYRSMAYKLRDKDGVEQVEKSLCLIVDGEYYRWRNLACRAEEVAAREEIAWIKRLESVRKDVGCFFGILKGRFRILNLPIVFRESAQVDNVVWTCCILHNMLHSFDGLKLHEPNMDCAGPDGLLDAWLHEDRTMNFGTNGRNSNGPPERVEVENGFFAMRRRPGTHYTYRVENNEVAWL 1418
            G  G+ NDKSI+ +D  V  +RE   Y    + + + DG     K   L+VD  Y++W  L   ++    + ++A+ KRLESVRKDV CFFGI+KGRFRIL L I + +   +DNV +TCCILHNMLHS+D     E   + AG  GL +AW H           + S+   E VEVE+GF   R++    + YR   N++AWL
Sbjct:  278 GFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 481          
BLAST of mRNA_H-paniculata_contig2455.6655.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 3.370e-41
Identity = 95/215 (44.19%), Postives = 126/215 (58.60%), Query Frame = 3
Query:  783 GGYLG*RKGMAGAVNDKSIVCFDKTVQAVREGEPYRSMAYKLRDKDGVEQVEKSLCLIVDGEYYRWRNLACRAEEVAAREEIAWIKRLESVRKDVGCFFGILKGRFRILNLPIVFRESAQVDNVVWTCCILHNMLHSFD--GLKLHEPNMDCAGPDGLLDAWLHEDRTMNFGTNGRNSNGPPERVEVENGFFAMRRRPGTHYTYRVENN-EVAWL 1418
            G  L   +G  GA NDK+I+ +DK V  +R    Y    YKL  +DG +  EK   L+VD  Y++WR L   ++    R ++ + KRLES RKDV C+FGILKGRFRI  L I F +   +DNV +TCCILHNMLHSFD  G    EPN   AG  GL +A    D   ++ + G + +G  E VEVE GF A+R +  T++ YR E   ++ WL
Sbjct:  195 GRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNW--AGSAGLHNA-ADRDPNTDYSSVG-SMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 405          
BLAST of mRNA_H-paniculata_contig2455.6655.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 1.890e-40
Identity = 95/215 (44.19%), Postives = 126/215 (58.60%), Query Frame = 3
Query:  783 GGYLG*RKGMAGAVNDKSIVCFDKTVQAVREGEPYRSMAYKLRDKDGVEQVEKSLCLIVDGEYYRWRNLACRAEEVAAREEIAWIKRLESVRKDVGCFFGILKGRFRILNLPIVFRESAQVDNVVWTCCILHNMLHSFD--GLKLHEPNMDCAGPDGLLDAWLHEDRTMNFGTNGRNSNGPPERVEVENGFFAMRRRPGTHYTYRVENN-EVAWL 1418
            G  L   +G  GA NDK+I+ +DK V  +R    Y    YKL  +DG +  EK   L+VD  Y++WR L   ++    R ++ + KRLES RKDV C+FGILKGRFRI  L I F +   +DNV +TCCILHNMLHSFD  G    EPN   AG  GL +A    D   ++ + G + +G  E VEVE GF A+R +  T++ YR E   ++ WL
Sbjct:  286 GRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNW--AGSAGLHNA-ADRDPNTDYSSVG-SMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 496          
BLAST of mRNA_H-paniculata_contig2455.6655.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 2.300e-39
Identity = 83/225 (36.89%), Postives = 119/225 (52.89%), Query Frame = 3
Query:  783 GGYLG*RKGMAGAVNDKSIVCFDKTVQAVREGEPYRSMAYKLRDKDGVEQVEKSLCLIVDGEYYRWRNLACRAEEVAAREEIAWIKRLESVRKDVGCFFGILKGRFRILNLPIVFRESAQVDNVVWTCCILHNMLHSFDGLKLHEPNMDCAGPDGLLDAWLHEDRT--MNFGTNG-----------RNSNGPPERVEVENGFFAMRRRPGTHYTYRVENNEVAWL 1418
            G  L    G  GA NDK+I+ +D  V  +R    Y    YKLR  +G E+  +   LI+D  Y+ W  L   ++   + ++ A+ + LESVRKDV CFFGILKGRFRIL L + + +   +DN+ +TCCILHNMLH+FDGL + + N D  G  G  DAW H+  T   + G+ G               G   R E       ++R+    + +R + N++ WL
Sbjct:   29 GRALAVTNGFTGATNDKTIIRYDSGVNNIRTESQYTEREYKLRKVNGTERTRRGCFLIMDNWYHEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLLPKEGEEEECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWL 253          
BLAST of mRNA_H-paniculata_contig2455.6655.1 vs. uniprot
Match: A0A6H5K8I3_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I3_9PHAE)

HSP 1 Score: 154 bits (389), Expect = 1.370e-37
Identity = 85/218 (38.99%), Postives = 122/218 (55.96%), Query Frame = 3
Query:  804 KGMAGAVNDKSIVCFDKTVQAVREGEPYRSMAYKLRDKDGVEQVEKSLCLIVDGEYYRWRNLACRAEEVAAREEIAWIKRLESVRKDVGCFFGILKGRFRILNLPIVFRESAQVDNVVWTCCILHNMLHSFDGLKLHEPNMDCAGPDGLLD-----------AWLHEDRTMNFGTNGRNSNGPPERVEVENGFFAMRRRPGTHYTYRVENNEVAWLGS 1424
            +G  GA NDK+I+ FDK   AVR G  Y+ + Y L+ +DG +  EK   LIVDG Y+ W+ L       + + E  + ++LESVRKD  C FG++KGRFRI  +  ++R+  ++DN+ +TC ILHNML ++DG++L EP+ D AG DG LD           A  HED                  VE ++GF A+R++  T++ YR     V W  S
Sbjct:  253 RGFPGAQNDKTIIKFDKFAMAVRNGW-YKDVEYTLKGEDGADIKEKGPWLIVDGGYHNWKQLQSPIRAPSNKAESGFKRQLESVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNIFFTCIILHNMLLAYDGIELLEPDCDWAGADGDLDKNIEHPVVRMSAPTHEDAV----------------VECDDGFDALRQKLVTNFAYRWGQGTVGWKRS 453          
BLAST of mRNA_H-paniculata_contig2455.6655.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 7.000e-35
Identity = 73/209 (34.93%), Postives = 117/209 (55.98%), Query Frame = 3
Query:  804 KGMAGAVNDKSIVCFDKTVQAVREGEPYRSMAYKLRDKDGVEQVEKSLCLIVDGEYYRWRNLACRAEEVAAREEIAWIKRLESVRKDVGCFFGILKGRFRILNLPIVFRESAQVDNVVWTCCILHNMLHSFDGLKLHEPNMDCAGPDGLLDAWLHEDRTMNFGTNGRNSNGPPERVEVENGFFAMRRRPGTHYTYRVENNEVAWLGSQS 1430
            +G  G+ NDK+ VC+D  V+ +R  + Y    + + ++DG     K   ++VD  Y++W+ L   ++   +  ++ + KRLESVRKDV CFFGILKGR RIL L + F+   ++DNV +TCCILHNMLH+FDG+     N +     G+    + E    +     ++ NG P+   VE G    +R+  T + YR ++ +    G+ +
Sbjct:   79 EGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNGRPQ---VEAGHAVRKRQLTTSFAYRKKHKKDIVYGNST 284          
BLAST of mRNA_H-paniculata_contig2455.6655.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 8.120e-35
Identity = 77/213 (36.15%), Postives = 122/213 (57.28%), Query Frame = 3
Query:  783 GGYLG*RKGMAGAVNDKSIVCFDKTVQAVREGEPYRSMAYKLRDKDGVEQVEKSLCLIVDGEYYRWRNLACRAEEVAAREEIAWIKRLESVRKDVGCFFGILKGRFRILNLPIVFRESAQVDNVVWTCCILHNMLHSFDGLKLHEPNMDCAGPDGLLDAWLHEDRTMNFGTNGRNSNGPPERVEVENGFFAMRRRPGTHYTYRVENN-EVAWL 1418
            G  L   +G  G+ NDK+I+C D+ V  +R  + Y    + +  KDG  +  K   LIVD  Y++WR L   ++   +  ++ + KRLESVRKDV CFFGILK RFRIL L + +++  ++D V +TCCILHNMLH+ DG+   E +++  G   L +   H   + + GT   N     ++ +VE     ++R+  T++ YR ++  ++ WL
Sbjct:  241 GRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHNLDSSSVGTKDLN-----DKPQVEAAHAELKRKLTTNFLYRKKHKKDIVWL 448          
BLAST of mRNA_H-paniculata_contig2455.6655.1 vs. uniprot
Match: A0A6H5JHC3_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC3_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 9.280e-35
Identity = 74/158 (46.84%), Postives = 105/158 (66.46%), Query Frame = 3
Query:  792 LG*RKGMAGAVNDKSIVCFDKTVQAVREGEPYRSMAYKLRDKDGVEQVEKSLCLIVDGEYYRWRNLACRAEEVAAREEIAWIKRLESVRKDVGCFFGILKGRFRILNLPIVFRESAQVDNVVWTCCILHNMLHSFDGLKLHEPNMDCAGPDGLLDAWL 1265
            LG  K   GA+NDK+IV FD+ V+ ++     + + + L  +DG E  E+ L LIVDG Y++     C  +    ++E+A+ K+LESVRKD+ CFFGILKGRFRIL +P+++R   ++D +  TCC LHNMLHS+DGL L E + + AG DG LD W+
Sbjct:  247 LGVSKAFPGAMNDKTIVMFDEYVRRIKT--ECKDVPFTLLGEDGSEFEERGLYLIVDGGYHK-----CPVQFPVTQDELAFRKQLESVRKDIECFFGILKGRFRILKMPLLYRGIHKLDCIFQTCCALHNMLHSYDGLSLLEKDCEWAGADGDLDPWV 397          
BLAST of mRNA_H-paniculata_contig2455.6655.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 1.210e-34
Identity = 75/208 (36.06%), Postives = 117/208 (56.25%), Query Frame = 3
Query:  804 KGMAGAVNDKSIVCFDKTVQAVREGEPYRSMAYKLRDKDGVEQVEKSLCLIVDGEYYRWRNLACRAEEVAAREEIAWIKRLESVRKDVGCFFGILKGRFRILNLPIVFRESAQVDNVVWTCCILHNMLHSFDGLKLHEPNMDCAGPDGLLDAWLHEDRTM--NFGTNGRNSNGPPERVEVENGFFAMRRRPGTHYTYRVENN-EVAWL 1418
            +G  G+ NDK+IVC+D  V  +R  + Y    + L ++DG     K    + D  Y++W+ L   ++   + +++ + KRLESVRKDV CFFGILKGRFRIL L + ++   ++DNV +TCCILHNMLH+FDG+     N +     G+      E      +FGT   N     ++ ++E G    +R+  T + YR ++  ++ WL
Sbjct:  124 EGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTLATEPEADCGSFGTKDVN-----DQPQLEIGHTVRKRQLTTSFAYRKKHKKDIVWL 326          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2455.6655.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JTC6_9PHAE3.880e-4340.69DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JAU4_9PHAE1.120e-4141.18Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE3.370e-4144.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE1.890e-4044.19Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQM6_9PHAE2.300e-3936.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8I3_9PHAE1.370e-3738.99Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
D7FSK2_ECTSI7.000e-3534.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBE2_9PHAE8.120e-3536.15Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHC3_9PHAE9.280e-3546.84DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5JUX7_9PHAE1.210e-3436.06DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2455contigH-paniculata_contig2455:16179..19495 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score144.8
Seed ortholog evalue4.5e-32
Seed eggNOG ortholog2880.D7FSK2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Plant transposon protein
EggNOG OGs2E2RF@1,2S9YA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size1670
Cds size633
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2455.6655.1prot_H-paniculata_contig2455.6655.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2455 18027..19267 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929712.1667128-UTR-H-paniculata_contig2455:16178..164781622929712.1667128-UTR-H-paniculata_contig2455:16178..16478Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2455 16179..16478 +
1691480978.2318358-UTR-H-paniculata_contig2455:16178..164781691480978.2318358-UTR-H-paniculata_contig2455:16178..16478Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2455 16179..16478 +
1622929712.192278-UTR-H-paniculata_contig2455:17352..175031622929712.192278-UTR-H-paniculata_contig2455:17352..17503Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2455 17353..17503 +
1691480978.243415-UTR-H-paniculata_contig2455:17352..175031691480978.243415-UTR-H-paniculata_contig2455:17352..17503Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2455 17353..17503 +
1622929712.2042568-UTR-H-paniculata_contig2455:17668..180261622929712.2042568-UTR-H-paniculata_contig2455:17668..18026Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2455 17669..18026 +
1691480978.2524507-UTR-H-paniculata_contig2455:17668..180261691480978.2524507-UTR-H-paniculata_contig2455:17668..18026Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2455 17669..18026 +
1622929712.2511582-UTR-H-paniculata_contig2455:19267..194951622929712.2511582-UTR-H-paniculata_contig2455:19267..19495Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2455 19268..19495 +
1691480978.281992-UTR-H-paniculata_contig2455:19267..194951691480978.281992-UTR-H-paniculata_contig2455:19267..19495Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2455 19268..19495 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929712.2192862-CDS-H-paniculata_contig2455:18026..181941622929712.2192862-CDS-H-paniculata_contig2455:18026..18194Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2455 18027..18194 +
1691480978.2671285-CDS-H-paniculata_contig2455:18026..181941691480978.2671285-CDS-H-paniculata_contig2455:18026..18194Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2455 18027..18194 +
1622929712.2347636-CDS-H-paniculata_contig2455:18802..192671622929712.2347636-CDS-H-paniculata_contig2455:18802..19267Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2455 18803..19267 +
1691480978.2748246-CDS-H-paniculata_contig2455:18802..192671691480978.2748246-CDS-H-paniculata_contig2455:18802..19267Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2455 18803..19267 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2455.6655.1

>prot_H-paniculata_contig2455.6655.1 ID=prot_H-paniculata_contig2455.6655.1|Name=mRNA_H-paniculata_contig2455.6655.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=211bp
MAGAVNDKSIVCFDKTVQAVREGEPYRSMAYKLRDKDGVEQVEKSLCLIV
DGEYYRWRNLACRAEEVAAREEIAWIKRLESVRKDVGCFFGILKGRFRIL
NLPIVFRESAQVDNVVWTCCILHNMLHSFDGLKLHEPNMDCAGPDGLLDA
WLHEDRTMNFGTNGRNSNGPPERVEVENGFFAMRRRPGTHYTYRVENNEV
AWLGSQSGQK*
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mRNA from alignment at H-paniculata_contig2455:16179..19495+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2455.6655.1 ID=mRNA_H-paniculata_contig2455.6655.1|Name=mRNA_H-paniculata_contig2455.6655.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3317bp|location=Sequence derived from alignment at H-paniculata_contig2455:16179..19495+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTCGAGCAATCTCCGCGCGATGATGATGCTGAAGATGAAGAAGATGGCC ACACCCAAAGAAGCAAAGAAGGGTGTATGCTCGGCCGCTGTACAGTGAAT CGGTGTGGGGAAGGATGCTTCAGTCCCCCGATCTCACGGACCCCAATTCG AGAAACGCTCGCCGCTTCAGGAAGCGCTTTCGTATACCCTATCCTTTCTT CGAGGAGCTGATGAAGGTGGTGCAAGAACGACAATGGTTTCCGAAAAGAG AGGGACACGTGGATGTCGCCGGTCGCCGAATGGTTCCTGTGGAGCTGAAG GTAAGCAACACGACAACACGCGATCTCGCAACCAGCGTTTCATGCTTGTT GTGCTTAATCATGCACCTGTTTAGTCATGCTTTGTGTTGTACGTGGCAGC CAATTTCCCTCAGTTTGCTGTTGTATTGAAATGCTGTCTTATTCTTGGCG TCTTCCACCATACAGTGCTACCTCAGTTGTACTTGACTCTACAGACGGTA AGATCTGTGTCTGTCACTGTGCATGACAGAAGTCGTCCTCTGATTTACAG TTTAGTAGAACTGTGATGATGCGAAGCTAAGTTATGATCTACATTACTGT AGTGCCTGGCCTCATTCCTGTGCAGTATAACCTGTACAAGAAGTATGGCC CTGCGAAGCTGTAGTACTTTGAATAATATGGTGGTGCTGACTAATAAAAA TAGCCTTGTTTTCACAGAAAATGTTCTCATCCAAGGCTGCCGAATCAGCC AGGGTTGAAGTACTTCACCGTCTCGACAACATGCCGTTGGAAAATTTCAA ACTGGGCAACATTCAGTTATCCGACAAGGTTAAGGTTACCCGTTCAAAAA TGTGGTACTTATTAGTGGTCATTGTAAATACTGTATTGTCTCTTTTTTCG TGTCGGCAAGGTGTGCTGCGCACACCTGTCGAGAATCGTTGTTTCGTCAT TAGCTTTGCTAGGCAAGGAATATCCAGACCGTCTAATTGACGCGATGAGC TTGTACCTTAAGCATGACGCGCGATGCAATACAGGACCTCTCTAATCGTT TGTTGTTCGATTTTGCTGTGGATGCATTAGATGCTTTTGTTTATTTATTG GTAAGTTCGATGGGTTACCCTGTTCAATTTCCCTCTTATTGTAGTCCTTC TCTCTCACGGTTACATTGCCACAGGGTGAATTACGAATTGTACACAATGG TCACACACCACGGAAGAAATGCCAGGATGACACTTGCGGTGGATTCTCTT CCGTAGGGTGTCTTAGGCCCATTAGAACAGTGCCACCTTGCCTTGCTGAG GGCGATTGGTCTTCGATAAGCCGAGGTGTGTCGTTGCAAGTATTCGTTTT CAGCGAGGCCATCGCACTGAGGAAATGAACGTCATCAATCAATCTTCTCC TTAATAATATTTCGCTATCCCAGCCGCTGTCCGTACGGCCAAGTGTTTCA TGCGATTCCGTCACCCCTTCTTGTGGCGGCTGTAACACAGGTTGTGGCGA GCTTGCAGATTATGGGGAGAGGGAATAGCTTCGATGATATCGGCCAGCTC TCCTTGATGAGCGAGTCGACTGCCCAAAGTGCGTTCCACATATTTTGCAA GTTTTTCGCTGAAGAGTTTTTTCATGAGTAAATTAAACTTCCTGCGGGGG ATGCCCTCGTAGCCACGACGAAGGCGTACGATGCGGTGGGCACCGGGGCA GTAGGCTCGACTGATGTCACCCACATCGCGTGGGGTTGCACCCCAGCATC ACATGCCTATCTCTACACGGGCAAGGGAGAATTCCCGACTCTCCCATAGG AGGCAACGGTAGACAACTCGGGGCGGGTATTTGGGTTGACGGAAAGGAAT GGCCGGAGCAGTGAACGATAAATCCATCGTTTGTTTCGACAAGACAGTTC AAGCGGTCAGGGAGGGTGAGCCGTACAGGTCGATGGCTTACAAGCTCCGC GATAAGGATGGCGTGGAACAGGTGGAGAAGAGTCTTTGCCTCATCGTCGA CGGAGAATATTACCGGGTGAGTCACTTGCTGTTGATTGATGGTCATTGCT GCTGCACCACTCTACGGAAATGCGTTGTATAGTTTTACGTTATGCGGAAA CAAGCTCTTCGTTTCTGACAGGCATACCCCGTTTGGTGTTGTGTATCATT CACACCTCACCTACGATGTCCGACATTGTTGATCCCAACGTAAACGGCTG CCCGAGGTCCCACTTTGTGAGTCGCAGCTCTAGACTCACCGGACATTGTT TCAAATATTACCGCCAGACGAGGTGCAAACTATGAGACAGCAAGCTTCCT TAACATAGGTAGCAGCTACGCGAAATCGGTAGATCGTACCACGTGGTGTA TCTTGTTCAAAGCGCAGGTCATGCCACCGTTGACAAGAACTTTGCTAGGA TGATAAGACGCTTCTGTGTCTTTTTTTATGGCCGATTTCAACCGTCGGTG TTGTTGATGTCGTCTTCAGCCTCAATTTCCTCTGTATCCCTGAGTGATCA TTGATCAAGGCTGAGATAAATCGTACGAGCCGGGCGTTTCAATATCTGAC ACGGTTGGCCAGACGCCGCATAAGAGCAACGTGTATCGACACTACTGTTT TCTCGTTTCCCCTCTTATTTGCAGTGGAGAAATCTAGCGTGCCGGGCAGA AGAAGTTGCAGCTCGAGAAGAAATAGCGTGGATTAAACGTCTCGAGAGCG TTCGAAAGGACGTGGGATGCTTCTTCGGTATTCTCAAGGGCCGCTTCAGA ATTTTGAATCTTCCCATTGTTTTCAGGGAGTCCGCTCAGGTAGACAACGT GGTCTGGACATGCTGTATCCTTCACAACATGCTGCATTCATTCGATGGAC TGAAGTTGCACGAGCCGAATATGGACTGTGCCGGACCGGATGGCCTCCTT GACGCGTGGCTTCACGAAGATCGCACAATGAACTTTGGCACGAACGGTCG CAATTCAAACGGGCCGCCAGAACGCGTCGAAGTCGAAAACGGTTTTTTCG CCATGAGAAGGAGGCCAGGGACGCACTACACATACAGGGTGGAAAACAAC GAAGTGGCTTGGCTGGGGTCGCAATCTGGTCAGAAATGATTTGAGCGTGT AGATTGGGCATGGTGCTATATGGATTTTCATGTCCCGTGACAAGTTGTGT TGTGATGTTTGAGGGTTTGGTTAGCAGGATGAACTGTAGCAAGCGATGTA ATTGTCGACCATCTTGGATGAATGACATATGGGCACGGAATGGCCGCCAC AGCATTTTTGCTAGGCATAATATGACCCGCTCTGACTTTAAATGTTATCA TGATTAATTTTGCTGGG
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Coding sequence (CDS) from alignment at H-paniculata_contig2455:16179..19495+

>mRNA_H-paniculata_contig2455.6655.1 ID=mRNA_H-paniculata_contig2455.6655.1|Name=mRNA_H-paniculata_contig2455.6655.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1266bp|location=Sequence derived from alignment at H-paniculata_contig2455:16179..19495+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCCGGAGCAGTGAACGATAAATCCATCGTTTGTTTCGACAAGACAGT
TCAAGCGGTCAGGGAGGGTGAGCCGTACAGGTCGATGGCTTACAAGCTCC
GCGATAAGGATGGCGTGGAACAGGTGGAGAAGAGTCTTTGCCTCATCGTC
GACGGAGAATATTACCGGATGGCCGGAGCAGTGAACGATAAATCCATCGT
TTGTTTCGACAAGACAGTTCAAGCGGTCAGGGAGGGTGAGCCGTACAGGT
CGATGGCTTACAAGCTCCGCGATAAGGATGGCGTGGAACAGGTGGAGAAG
AGTCTTTGCCTCATCGTCGACGGAGAATATTACCGGTGGAGAAATCTAGC
GTGCCGGGCAGAAGAAGTTGCAGCTCGAGAAGAAATAGCGTGGATTAAAC
GTCTCGAGAGCGTTCGAAAGGACGTGGGATGCTTCTTCGGTATTCTCAAG
GGCCGCTTCAGAATTTTGAATCTTCCCATTGTTTTCAGGGAGTCCGCTCA
GGTAGACAACGTGGTCTGGACATGCTGTATCCTTCACAACATGCTGCATT
CATTCGATGGACTGAAGTTGCACGAGCCGAATATGGACTGTGCCGGACCG
GATGGCCTCCTTGACGCGTGGCTTCACGAAGATCGCACAATGAACTTTGG
CACGAACGGTCGCAATTCAAACGGGCCGCCAGAACGCGTCGAAGTCGAAA
ACGGTTTTTTCGCCATGAGAAGGAGGCCAGGGACGCACTACACATACAGG
GTGGAAAACAACGAAGTGGCTTGGCTGGGGTCGCAATCTGGTCAGAAATG
ATGGAGAAATCTAGCGTGCCGGGCAGAAGAAGTTGCAGCTCGAGAAGAAA
TAGCGTGGATTAAACGTCTCGAGAGCGTTCGAAAGGACGTGGGATGCTTC
TTCGGTATTCTCAAGGGCCGCTTCAGAATTTTGAATCTTCCCATTGTTTT
CAGGGAGTCCGCTCAGGTAGACAACGTGGTCTGGACATGCTGTATCCTTC
ACAACATGCTGCATTCATTCGATGGACTGAAGTTGCACGAGCCGAATATG
GACTGTGCCGGACCGGATGGCCTCCTTGACGCGTGGCTTCACGAAGATCG
CACAATGAACTTTGGCACGAACGGTCGCAATTCAAACGGGCCGCCAGAAC
GCGTCGAAGTCGAAAACGGTTTTTTCGCCATGAGAAGGAGGCCAGGGACG
CACTACACATACAGGGTGGAAAACAACGAAGTGGCTTGGCTGGGGTCGCA
ATCTGGTCAGAAATGA
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