|
|
Homology
BLAST of mRNA_H-paniculata_contig2455.6654.1 vs. uniprot
Match: A0A6H5L2R8_9PHAE (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2R8_9PHAE) HSP 1 Score: 470 bits (1210), Expect = 2.130e-154 Identity = 246/351 (70.09%), Postives = 289/351 (82.34%), Query Frame = 2
Query: 422 KLGEVANSIASCLALSFFSISMILANKALAFNFDANIDALPMAFQCFTAAVLVELARRRGWVSYEPFNLKTAMAWLPIAFFFCCMLVSSFLSYKYMGVPMVTVFKSLTNLIILAGDFFWHGQRASRLVMLSLAVMTIGAVLASWNDIEFSVWGYVWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGTLMLLPVAIMLGELWTFDSLREKSDKIGFLDREDLHTPSYILLNIFAGAAGFFLNFAALWCVSANSATTYAVVNTVNNFPVSIIGYFMF-AQPMTVVQGEFIVVNITGGFIYSYAKIKEQKEKEQVELQRNAEVNEGSIEAVPLVADGDLNEKRSNSS 1471
K+GEVAN+IASC ALSFFSISMILANKALA F+AN+ LPMAFQCF A +LVE +R +G V YEPFN+ TAM W PIA FFC ML+SSFLS +YMGVPMVTVFKSLTNLII+AGD+FWH Q A+ LV+LSLAVMT GA+LASW+DIEFS WGY WMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLG L++LP+A+ GE++T +S + +GFLDR DLHTP+Y+ +N+ AGAAGFFLNFAALWCVSA SATTYAVVNTVNNFPVSI+GY++ ++ Q EFIVVNI GGFIYS AKIKEQK KE+ E ++ N G +EA+PLV G ++ +S +S
Sbjct: 76 KMGEVANAIASCAALSFFSISMILANKALAVLFNANLHFLPMAFQCFIAVLLVEASRMKGLVQYEPFNMATAMRWFPIAIFFCTMLLSSFLSMQYMGVPMVTVFKSLTNLIIVAGDYFWHSQVATPLVLLSLAVMTGGAILASWSDIEFSAWGYFWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGCLIMLPLAVCFGEVFTLES----TSLVGFLDRADLHTPTYLGINLGAGAAGFFLNFAALWCVSATSATTYAVVNTVNNFPVSILGYYLLPGARISHQQWEFIVVNIVGGFIYSAAKIKEQKAKERAEALLASQDN-GDVEAIPLVG-GTTDDLKSRNS 420
BLAST of mRNA_H-paniculata_contig2455.6654.1 vs. uniprot
Match: D8LTL4_ECTSI (TPT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTL4_ECTSI) HSP 1 Score: 297 bits (760), Expect = 7.130e-89 Identity = 150/313 (47.92%), Postives = 214/313 (68.37%), Query Frame = 2
Query: 443 SIASCLALSFFSISMILANKALAFNFDANIDALPMAFQCFTAAVLVELARRRGWVSYEPFNLKTAMAWLPIAFFFCCMLVSSFLSYKYMGVPMVTVFKSLTNLIILAGDFFWHGQRASRLVMLSLAVMTIGAVLASWNDIEFSVWGYVWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGTLMLLPVAIMLGEL---WTFDSLREKSDKIGFLDREDLHTPSYILLNIFAGAAGFFLNFAALWCVSANSATTYAVVNTVNNFPVSIIGYFMFAQPMTVVQGEFIVVNITGGFIYSYAKIKEQKEKEQ 1372
+++S L+ SF S+SM+++NK LAF + +++ L + QC A +LVE RR G+ SY+PFN TA WLP++ F ML +SF + + M VPMVTVFK+LTN++I+ GD+++ Q AS LVM S+AVM GA+ AS+ND++F+ WGY WM ANC TA YVL MK AT+++KLP+FGMVFYNNLL T +L P A M+G+ WT LR T +Y+ +F+G G LNFA+LWCV A SATTYAVV +VN P +++GY +F ++ GEF++V++ GGF+YS+AK++E++ E+
Sbjct: 26 AVSSSLSYSFCSVSMVMSNKLLAFTYKSDMAFLVVVGQCLVATILVEAVRRMGYASYDPFNFSTARRWLPVSICFSAMLFTSFKALEVMNVPMVTVFKNLTNIVIVTGDWWFFQQAASWLVMFSMAVMVFGALFASYNDLDFNPWGYFWMVANCCTTAGYVLYMKHATKSIKLPRFGMVFYNNLLTTCLLTPAAFMMGDFTIFWTTPQLR---------------TVTYMTALLFSGVVGVLLNFASLWCVGATSATTYAVVGSVNVIPTALLGYQLFDSAISTQMGEFMLVSMIGGFMYSFAKLQEKRSLER 323
BLAST of mRNA_H-paniculata_contig2455.6654.1 vs. uniprot
Match: A0A7S2SW66_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW66_9STRA) HSP 1 Score: 283 bits (724), Expect = 2.380e-84 Identity = 153/321 (47.66%), Postives = 214/321 (66.67%), Query Frame = 2
Query: 419 PKLGE-----VANSIASCLALSFFSISMILANKALAFNFDANIDALPMAFQCFTAAVLVELARRRGWVSYEPFNLKTAMAWLPIAFFFCCMLVSSFLSYKYMGVPMVTVFKSLTNLIILAGDFFWHGQRASRLVMLSLAVMTIGAVLASWNDIEFSVWGYVWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGTLMLLPVAIMLGELWTFDSLREKSDKIGFLDREDLHTPSYILLNIFAGAAGFFLNFAALWCVSANSATTYAVVNTVNNFPVSIIGYFMFAQPMTVVQGEFIVVNITGGFIYSYAKIKEQKEK 1366
PK G+ +A+ + SCLA S SI+M+L+NKALA F +I L + QC A +LVE +R G VSY+PF A+ WLP+ F ML++SF S+K++ VP++TVFK+LTN++I+AGD++WHGQR + ++ + VM +GAV A+ ND+ FS GY WM NC +TASYVL MK AT+++ + KFGMVFYNNLL +LLP+A LGE+ D+ D I L+ ++ +NI AG+ GFFLN A+LWCVSA SATTYA+V +VN PV+++G F+F ++ +I V++ GGFIYSY K+ E K
Sbjct: 6 PKAGDAKSIGMASQLLSCLAYSLCSITMVLSNKALAAVFHVDIPVLLVVMQCSFAVLLVEASRIMGIVSYQPFQSSVALRWLPVNLCFVVMLMTSFRSFKFLNVPIITVFKNLTNILIVAGDWYWHGQRITLGIIAAFGVMVVGAVFAAKNDVLFSFEGYCWMLGNCLSTASYVLYMKTATKSVDISKFGMVFYNNLLSVPLLLPLAFGLGEV---DTALANLDIITSLN--------FLFVNIVAGSMGFFLNLASLWCVSATSATTYALVGSVNKIPVALLGAFLFDAAISSQGAIYIGVSMCGGFIYSYVKLTESPRK 315
BLAST of mRNA_H-paniculata_contig2455.6654.1 vs. uniprot
Match: A0A836C853_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C853_9STRA) HSP 1 Score: 280 bits (716), Expect = 2.210e-81 Identity = 166/410 (40.49%), Postives = 233/410 (56.83%), Query Frame = 2
Query: 443 SIASCLALSFFSISMILANKALAFNFDANIDALPMAFQCFTAAVLVELARRRGWVSYEPFNLKTAMAWLPIAFFFCCMLVSSFLSYKYMGVPMVTVFKSLTNLIILAGDFFWHGQRASRLVMLSLAVMTIGAVLASWNDIEFSVWGYVWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGTLMLLPVAIMLGE------------------------LWTFDSLRE--KSDKIGFLDREDLHT------------------------------------PSYILLNIFAGAAGFFLNFAALWCVSANSATTYAVVNTVNNFPVSIIGYFMFAQPM---------------TVVQGEFIVVNITGGFIYSYAKIKEQKEKEQVELQRNAE-----VNEGSIEAVP 1426
++ SCLA S S++M+LANKALA +FDAN L + FQC A +LVE +RR WV ++K AM W+P+ FFC ML +SF++ K+M VPMVTVFK+LTN+II+ GD+ ++ Q + L++ SL VM GA LA +D+E + WGY+WMSANC TASY+L MK+ATR++KL +FGMVFYNNLLG ++L PVA+ E LW F +E + IG + R DL T ++ LN+FAGAAGF LNFA+LWCV A SATTYA+V +VN P+ ++G+ +F P+ T ++ +++TGGF+YS+AK++ Q + E R+AE + EG+ + P
Sbjct: 12 ALLSCLAYSSCSLTMVLANKALASSFDANFPILMVVFQCLVAVLLVETSRRHQWVENYALDMKLAMQWVPVNLFFCAMLFTSFMALKWMNVPMVTVFKNLTNVIIVWGDWHFYNQSVTLLILASLGVMVFGAALAGKDDMESNAWGYIWMSANCVTTASYILYMKYATRSIKLTRFGMVFYNNLLGFVLLAPVALAASEVTGALCALQSVDVGVPLTHSANEDLW-FTGGKEIRLGEVIGAVARPDLWTLLXXXXXXXXXXXXXASASLSXXXXXXXXXXXXXXXXXFMGLNLFAGAAGFCLNFASLWCVGATSATTYAIVGSVNKVPMMVLGWMLFKSPIVXXXXXXXXXXXXXXTAQSALYMTISLTGGFMYSWAKVR-QAPQAATERPRDAERHLAPIKEGNAKKAP 419
BLAST of mRNA_H-paniculata_contig2455.6654.1 vs. uniprot
Match: A0A1Z5JIF2_FISSO (GDP-mannose transporter n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIF2_FISSO) HSP 1 Score: 270 bits (691), Expect = 5.460e-79 Identity = 150/312 (48.08%), Postives = 197/312 (63.14%), Query Frame = 2
Query: 443 SIASCLALSFFSISMILANKALAFNF----DANIDALPMAFQCFTAAVLVELARRRGWVSYEPFNLKTAMAWLPIAFFFCCMLVSSFLSYKYMGVPMVTVFKSLTNLIILAGDFFWHGQRASRLVMLSLAVMTIGAVLASWNDIEFSVWGYVWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGTLMLLPVAIMLGELWTFDSLREKSDKIGFLDREDLHTPSYILLNIFAGAAGFFLNFAALWCVSANSATTYAVVNTVNNFPVSIIGYFMFAQPMTVVQGEFIVVNITGGFIYSYAKIKEQKEK 1366
+IASC SF S+SMIL NK+LA ++ D N++ L + FQ AAV VE+ R WV Y P N +TA AW P+ FFC ML + +S + VPMVTVFK++TN+I AGD+ + G + L M + AVM +GAV A+ NDI + G WM ANC AT+SYVL MKFAT+ +KL KFGMVF NN+L +LLPVA + GEL TF L+ E +HT Y N FAG GFFLNFA+L CVS +TYA+V ++N PV+I+GY +F + FI V++ GGF+YSYAKI+ ++
Sbjct: 53 AIASCTFYSFCSVSMILVNKSLASSYNHLIDGNLNVLLVVFQAIIAAVSVEVCRMMHWVQYPPLNWETARAWAPVNVFFCLMLFTGMVSLETNSVPMVTVFKNVTNIITTAGDYIFFGSQPEGLAMAAFAVMFLGAVAAAQNDIHVTATGLFWMVANCLATSSYVLYMKFATQNIKLSKFGMVFVNNVLCVALLLPVAFLNGELATF------------LNAEQVHTWDYAGKNAFAGFIGFFLNFASLHCVSVTGPSTYAIVGSLNKIPVAILGYLIFDSVIDSKTWFFISVSLCGGFLYSYAKIRSANQR 352
BLAST of mRNA_H-paniculata_contig2455.6654.1 vs. uniprot
Match: A0A7S1D394_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D394_CYCTE) HSP 1 Score: 270 bits (689), Expect = 6.860e-79 Identity = 139/309 (44.98%), Postives = 196/309 (63.43%), Query Frame = 2
Query: 452 SCLALSFFSISMILANKALAFNF----DANIDALPMAFQCFTAAVLVELARRRGWVSYEPFNLKTAMAWLPIAFFFCCMLVSSFLSYKYMGVPMVTVFKSLTNLIILAGDFFWHGQRASRLVMLSLAVMTIGAVLASWNDIEFSVWGYVWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGTLMLLPVAIMLGELWTFDSLREKSDKIGFLDREDLHTPSYILLNIFAGAAGFFLNFAALWCVSANSATTYAVVNTVNNFPVSIIGYFMFAQPMTVVQGEFIVVNITGGFIYSYAKIKEQKEK 1366
+C+ SF S+SM+L NK+LA ++ D +++ L + FQ TA VEL +R WV Y FN++TA W P+ FC ML + S ++ VPMVT+FK++TN+++ GD+++ G LV ++ AVM GA+ A+W+DI + G WM ANC ATA Y+L MKFAT+ +KL KFGMVFYNN+L TL LLP +I GE+ L+ E +HT Y N+FAG GFFLNFA+L CV+A TTYA+V ++N PV+I+GY +F +T FI +++ GGF+YSYAKI+ + K
Sbjct: 43 ACMMYSFCSVSMVLTNKSLASSYNQLIDGDLNVLLVVFQAITAVGCVELCKRLKWVEYPNFNMRTAKLWAPVNVLFCLMLFTGMASLQFNSVPMVTIFKNITNIVVTCGDYYFFGTSVESLVAMAFAVMLGGAIAAAWHDIYITWVGLFWMCANCLATAGYILYMKFATKNVKLSKFGMVFYNNVLCTLFLLPASIFRGEVTLL------------LETEAIHTWDYFFKNLFAGFIGFFLNFASLNCVAATGPTTYAIVGSLNKVPVAILGYILFDNKITPESWFFICISMCGGFLYSYAKIQGNRNK 339
BLAST of mRNA_H-paniculata_contig2455.6654.1 vs. uniprot
Match: A0A7S0F6U4_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F6U4_9STRA) HSP 1 Score: 265 bits (677), Expect = 1.440e-77 Identity = 139/313 (44.41%), Postives = 199/313 (63.58%), Query Frame = 2
Query: 434 VANSIASCLALSFFSISMILANKALAFNF----DANIDALPMAFQCFTAAVLVELARRRGWVSYEPFNLKTAMAWLPIAFFFCCMLVSSFLSYKYMGVPMVTVFKSLTNLIILAGDFFWHGQRASRLVMLSLAVMTIGAVLASWNDIEFSVWGYVWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGTLMLLPVAIMLGELWTFDSLREKSDKIGFLDREDLHTPSYILLNIFAGAAGFFLNFAALWCVSANSATTYAVVNTVNNFPVSIIGYFMFAQPMTVVQGEFIVVNITGGFIYSYAKIKEQK 1360
++ + +C A +F S+SM+L NK+LA ++ + +++ L + FQ A V VE R+ WV Y P +L W P+ FFFC ML + S ++ VPMVT+FK++TN+I GD+ + +A LV+L+ VM GAV A+WNDI + G +WM+ANCF+ A+YVL MK+AT+ +K+PKFGMV+ NN+L LLP A++ GE+ TF L + LHT Y N+FAG GFFLNFA+L CVSA TTYA+V ++N PV+IIGY +F +T FI V++ GGF+YSYAK++ +K
Sbjct: 17 ISQPLVACGAYAFCSVSMVLTNKSLASSYNHLIEGDLNLLLVVFQAIVAVVAVEGCRKMKWVEYPPASLDLMKQWAPVNFFFCLMLFTGMGSLEHNSVPMVTIFKNVTNMITFFGDYMYFDAKAEPLVLLAFGVMLSGAVAAAWNDISVGITGLMWMAANCFSCAAYVLYMKYATKNIKVPKFGMVYLNNVLCVCFLLPAALIRGEVTTF------------LSSQALHTFDYTSKNLFAGLIGFFLNFASLNCVSATGPTTYAIVGSMNKIPVAIIGYVIFDSKITPETWMFISVSMAGGFLYSYAKLRAKK 317
BLAST of mRNA_H-paniculata_contig2455.6654.1 vs. uniprot
Match: A0A7S4MX17_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MX17_9STRA) HSP 1 Score: 264 bits (674), Expect = 2.700e-76 Identity = 136/305 (44.59%), Postives = 193/305 (63.28%), Query Frame = 2
Query: 446 IASCLALSFFSISMILANKALAFNF----DANIDALPMAFQCFTAAVLVELARRRGWVSYEPFNLKTAMAWLPIAFFFCCMLVSSFLSYKYMGVPMVTVFKSLTNLIILAGDFFWHGQRASRLVMLSLAVMTIGAVLASWNDIEFSVWGYVWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGTLMLLPVAIMLGELWTFDSLREKSDKIGFLDREDLHTPSYILLNIFAGAAGFFLNFAALWCVSANSATTYAVVNTVNNFPVSIIGYFMFAQPMTVVQGEFIVVNITGGFIYSYAKI 1348
I +C F S+SM++ NK+LA ++ + +++ L + FQ F A + VE+ ++ WV Y F+ KTA W P+ FC ML + S ++ VPMVTVFK++TN++I GD F+ G R LV+++ +M GAV A+WND+ + G WM NCF TA YVL MKFAT+ +KL KFGMVFYNN+L + LLPV I+ GE+ TF ++ + +HT Y L N FAG GFFLNFA+L CVS TTYA++ ++N P++++GYF+F +T FI V++ GGF+YSYAKI
Sbjct: 74 IFACSLYCFCSVSMVIVNKSLASSYNHLIEGDLNLLLVVFQAFVAVIAVEICKKLKWVEYPGFDFKTARQWAPVNIMFCGMLFTGMASLQHNSVPMVTVFKNITNIVISIGDLFFFGSRVEILVIVAFGIMLGGAVSAAWNDVHVTSQGVFWMCMNCFCTAGYVLYMKFATKNVKLSKFGMVFYNNILCMIFLLPVTIINGEMVTF------------INTDKIHTMDYFLKNTFAGFVGFFLNFASLNCVSHTGPTTYAILGSLNKIPIAVLGYFIFDSTITPDTWFFIGVSMCGGFLYSYAKI 366
BLAST of mRNA_H-paniculata_contig2455.6654.1 vs. uniprot
Match: A0A4D9DFY1_9STRA (EamA domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DFY1_9STRA) HSP 1 Score: 260 bits (665), Expect = 7.600e-75 Identity = 142/306 (46.41%), Postives = 198/306 (64.71%), Query Frame = 2
Query: 443 SIASCLALSFFSISMILANKALAFNFDANIDALPMAFQCFTAAVLVELARRRGWVSY--EPFNLKTAMAWLPIAFFFCCMLVSSFLSYKYMGVPMVTVFKSLTNLIILAGDFFWHGQRASRLVMLSLAVMTIGAVLASWNDIEFSVWGYVWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGTLMLLPVAIMLGELWTFDSLREKSDKIGFLDREDLHTPSYILLNIFAGAAGFFLNFAALWCVSANSATTYAVVNTVNNFPVSIIGYFMFAQPMTVVQGEFIVVNITGGFIYSYAKIKE 1354
+I SC A +F SI+M+L NKALA +DA+ID L +AFQ A VLV G++ + F+ A+ WLP+ FF ML + FLS +Y+ VPMVT+FK+LTN+ I+ G++ +G S +L+ A+M +GAVLA+ NDI FS GY WM +NC A YVL MK AT+T++LPKF MVFYNNLL +LL A + GE TF EDLHT +Y+ L+++AG GF LN A LWCVS NSATTY+VV +N P++++G+ +F P+T F+ +++ GGF+Y+Y K++E
Sbjct: 91 AIISCFAYTFCSITMVLTNKALASQYDADIDFLVIAFQSLCAVVLVLTCDTLGFIQHGSTKFDPGVALQWLPVNLFFVSMLSTGFLSLRYLNVPMVTIFKNLTNVGIMWGEWSLYGAHVSLGAILACAIMILGAVLAAANDITFSGIGYFWMLSNCVCCAGYVLYMKHATKTVRLPKFAMVFYNNLLSLPILLAGAAVRGEYTTF------------FWSEDLHTAAYVSLSLYAGLVGFALNLATLWCVSNNSATTYSVVGAMNKIPLAVVGWLLFRTPITQKALIFLSLSMCGGFLYTYTKLRE 384
BLAST of mRNA_H-paniculata_contig2455.6654.1 vs. uniprot
Match: A0A7S2R176_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R176_9STRA) HSP 1 Score: 258 bits (658), Expect = 2.020e-74 Identity = 135/310 (43.55%), Postives = 194/310 (62.58%), Query Frame = 2
Query: 443 SIASCLALSFFSISMILANKALAFNFD----ANIDALPMAFQCFTAAVLVELARRRGWVSYEPFNLKTAMAWLPIAFFFCCMLVSSFLSYKYMGVPMVTVFKSLTNLIILAGDFFWHGQRASRLVMLSLAVMTIGAVLASWNDIEFSVWGYVWMSANCFATASYVLTMKFATRTMKLPKFGMVFYNNLLGTLMLLPVAIMLGELWTFDSLREKSDKIGFLDREDLHTPSYILLNIFAGAAGFFLNFAALWCVSANSATTYAVVNTVNNFPVSIIGYFMFAQPMTVVQGEFIVVNITGGFIYSYAKIKEQK 1360
+I SC F SISM+L NK+LA +++ +++ L + FQ A + VE ++ WV Y FN++TA W P+ FC ML + S + VPMVT+FK++TN+ GD+++ G R V+LS +VM +GA+LA+ +D E + G WM +NCFATA Y+L MK+AT+ +KL KFGMVFYNN+L L LLPVA + GEL TF L +H+ Y N FAG GFFLNFA+L CV+ TTYA+V ++N P++ +GYFMF ++ + +FI +++GGF+YSYAKI+ +
Sbjct: 43 AILSCALYCFCSISMVLVNKSLASSYNDLIQGDLNVLLVVFQAIIAVIAVETCKKMKWVEYPTFNMRTARQWAPVNIMFCLMLFTGMASLQVNSVPMVTIFKNITNIFCSFGDYYFFGSTVDRFVILSFSVMLLGALLAAGSDFEMNPVGIFWMISNCFATAGYILYMKYATKNVKLTKFGMVFYNNVLCILFLLPVATINGELLTF------------LRTNAIHSFDYFWKNGFAGFVGFFLNFASLNCVANTGPTTYAIVGSLNKIPITFLGYFMFHDTVSPDKWKFIAFSMSGGFLYSYAKIRSSR 340
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 462.2 |
| Seed ortholog evalue | 2.2e-127 |
| Seed eggNOG ortholog | 2880.D7G4P6 |
| Preferred name | VRG4 |
| KEGG ko | ko:K14835,ko:K15356 |
| KEGG TC | 2.A.7.13 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000139,GO:0000271,GO:0003674,GO:0005215,GO:0005338,GO:0005458,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005783,GO:0005794,GO:0005975,GO:0005976,GO:0006464,GO:0006486,GO:0006487,GO:0006807,GO:0006810,GO:0007163,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009272,GO:0009987,GO:0010383,GO:0012505,GO:0015780,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0016051,GO:0019538,GO:0022857,GO:0030447,GO:0030448,GO:0031090,GO:0031224,GO:0031984,GO:0033692,GO:0034637,GO:0034645,GO:0036080,GO:0036211,GO:0040007,GO:0042546,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0051179,GO:0051234,GO:0051278,GO:0055085,GO:0070085,GO:0070589,GO:0070592,GO:0071554,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071852,GO:0071966,GO:0090480,GO:0098588,GO:0098791,GO:1901135,GO:1901137,GO:1901264,GO:1901505,GO:1901564,GO:1901566,GO:1901576,GO:1990570 |
| EggNOG free text desc. | nucleotide-sugar transmembrane transporter activity |
| EggNOG OGs | COG5070@1,KOG1444@2759 |
| Ec32 ortholog description | GDP-mannose transporter |
| Ec32 ortholog | Ec-00_007820.1 |
| EC | 2.1.1.310 |
| COG Functional cat. | GOU |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko02000,ko03009 |
| Exons | 9 |
| Model size | 2812 |
| Cds size | 1104 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2455.6654.1 >prot_H-paniculata_contig2455.6654.1 ID=prot_H-paniculata_contig2455.6654.1|Name=mRNA_H-paniculata_contig2455.6654.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=368bp
MSFPRGHGDGQAAAAPKLGEVANSIASCLALSFFSISMILANKALAFNFD
ANIDALPMAFQCFTAAVLVELARRRGWVSYEPFNLKTAMAWLPIAFFFCC
MLVSSFLSYKYMGVPMVTVFKSLTNLIILAGDFFWHGQRASRLVMLSLAV
MTIGAVLASWNDIEFSVWGYVWMSANCFATASYVLTMKFATRTMKLPKFG
MVFYNNLLGTLMLLPVAIMLGELWTFDSLREKSDKIGFLDREDLHTPSYI
LLNIFAGAAGFFLNFAALWCVSANSATTYAVVNTVNNFPVSIIGYFMFAQ
PMTVVQGEFIVVNITGGFIYSYAKIKEQKEKEQVELQRNAEVNEGSIEAV
PLVADGDLNEKRSNSSF* back to topmRNA from alignment at H-paniculata_contig2455:940..15292- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2455.6654.1 ID=mRNA_H-paniculata_contig2455.6654.1|Name=mRNA_H-paniculata_contig2455.6654.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14353bp|location=Sequence derived from alignment at H-paniculata_contig2455:940..15292- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CACATGGTCACGGCCTCCGTCTTCTATACAGTCAGGCTTTTTAAGTTGCG
CATGTTGGAACGATAATGTGGCCACGGGTCGAGCTATGAGAAAAATGAGC
GAATATTAAAAATGCAGAAACAAAACAATGTTCATCAGCTCGCCTTCAGT
AGAACTCGTGGCTAGAGTGTCAGTACCACCTCCTGAACCTCGCATACAAG
ACTGTACGGCGGACAATTGAAGCGCATCTGCCGCAAGAGCGCCGATTATC
GGTATACCCTACGTGCGGGTGTGGCAGGGTTCCCCTGCCCCCTCGAAACA
GTCAGAGAACATTCAGAAAATTCGGAGCAAGAAGGGTGTGATTGCTCAGG
CATCGAAAACAGGCAGTGACAGTATGAGCTTCCCCAGAGGACATGGAGAT
GGACAGGCGGCCGCTGCACCGAAGTTGGGAGAGGTGGCCAACTCCATCGC
GTCATGCCTTGCACTCAGCTTCTTCTCCATCTCGATGATCCTCGCAAATA
AGGTAGGTGACAGCCAAGCGACTAATGGAGAAGTGAGTGTGCCCTGCGTT
TATCAGTCAAGACGGGTGACTTGCCCTCGATTTCAAGAATTGACACCAGC
TTTTCCCAACCATCTCACAGGTGTGAGAGTAAGGCACACTGTCGCCATGC
ACAGCATAGAGACAATGTATAGCCTAGGGACAGACCATCTGCGTGTCGGG
AGTGAAGGAGCTCTACAATTCCCCTCGCTATTGTGTCAGCCTGCTACTTT
CGTTTCGTGTTGTGGGAGACGGTACTCGTCTTGTCTATGTTTCCGTTTTT
GTGGTCCGTCGGTGATGCTCCTGTGCGTTACGCGGAACTTCCGAGAGAAC
ATTTGGCCTCAAATAATAGGAACAATTGGAAGCACACCACCACGCACGAC
GCGAACATCAGTTTGTTGTCCGCAGTAAATATAACTACTTGGCACTTGTC
TCTGAAATAAATCGATAGGATAGGGCAGTTGGGGCTATCGTACGCACCAT
GCTGATGAGCAGCAGTATATTCACCGAGGCGCAGTTAACAGCTCGTTCCG
TGCTCGGTGTTTCCTTGTGGGTAGCCGTTGAGGTATCGCTTTAAGGGAAA
GCGAGAGTAGACATCACTTCTGTGGAGATTATTATAATAACGGTCAGTAG
GTAAAACACCATGAAGTTGAGTCGAACTTTGGTCAGTTGGTGCATGGGGT
ATAATTTTTGAACGGCGACTGTACACGGTGCGAGCGAGGTACTTCATGGT
TGACTGGAATAATGTATGTTGCACCCGTGTATTTCCGCATTTGAGGAAGC
AGAGGTTGTTCAATTTGACCACGTCTCCAGAATGACAGGCAATACGTTGA
CTGTCTGTCTTTGTTTTGACACGCTCTCTGTATATACGTCACTGGTGTAC
TAGCTTCTCACATATTTCGCTAAAATATACCATCCGATAGACGTTTTACC
TGACAGCATGTAATGTGGTCCAAGCAGAAACGTATGCGAGTTTGGCATGT
TTGTATGAAACGATCGTGCATGGTCAATCCGAAGTCCACCCGAGCCAAAA
CCCAATCCCGACTTCTGAACCTTGCATGTATTTTCAGCAGAATATACCCT
TTGCGCGTCAAATCAGACGCAAGTCATGCCTGCAATCTACTGAAGCGCTC
TCTTTTATTGCCTCAACGATGGGCTGCTCCATATCACGCGAAGGATCAAT
CCAAACAGAGACGAGGGACAGCATGCAGCCAGTACAGTAGTCAACACGAA
ATTTGTTGCTATAGGAATATGTTTCGGAATACCTTGTCAGCTGATCTGTC
CGTCCGTATGGTGTCAGTTATATAATACCATGAACGGATATCCGGAAAAG
TTATTTTGATACGAAATTCGTCGGTAATCTCTTTTCACTTAATTATAGTA
TTTGTAGTTTTTTTAGATCCCCGAAAAGATATTTCACGTCCACGGAATTT
GACCAAATGGTGAAATGTAACTTCCATGACATGATAAACAAGGAAGTCGT
GGCGCATAATAAACTCTATCGTACCCACGTTGACCGACCACACTGAGAGA
TTCGTCGTCGTTGGTGCGAAGGACACTAAAACAGCGTATGCCGCAGTCCT
GCTGCTGTCGCCCCGGCATCATGTGCTTTGTGAGCCTGAGCGAGCTATAG
TAACCAGTCCGAATTGATTTTGTGTGTGAAAGTTGTGCCAGGGGTCGCAT
GTGCGTGTTGCAGGTGTGTGGTGATCGAGTATCATCGTGACCATAGGACC
CTCGGCATGCTTGAAGGAAACCCTGCACACAAAAATGGGGGGGGGTGAGA
TTTTGTCTCGAAAATAGGCAAATGAAAAAAAAGGGAACTTTCGGCTACTT
GGACCGTTTGAGAGGGTGAGGGAAAATCGGGGTCACTTTCTATCGAGAGA
ACTCGTCAATGGCTGGGTCCGAGAAAAATGTACTATCTGAAAGATTTATC
AGTGTCGTTGATCGTTGGATTTGTTTTGGCTTATTCAATATCGGGCATGT
GCCAACCATTTTGCCTCATCATCTTATCTGGTTTTGTCATTTTCCATTTA
TTGCCTTTTTTGTACCTTTTTGTGACAATAACGCCCTACTCTGTGATGCC
ATTTTTTTCGCATCGGACCAACGATAACGCCTCCTTGATTCCTTTGTCTT
GTTTCTTCTCCTTTTCTATTCGCTGTTGCTATCGCACTTTTTCTATTGGC
CACAAATGTTTGCGCGCGGGCCAATGCTTGGCACAACTGGCCAATCAACT
ATGCACGCTGGTTCGTCATGGACCGACCAAAATGGTGGAACGATTGATCA
ACTTGATAGGCCCTGGCGTTCAACTTTGATGCAAACATCGATGCGCTTCC
AATGGCGTTCCAGGTCAGAGAAGGAGAAATAAGGAAAATCATCTATATAC
CTATGTCGTTGTTGGTAGTTGGGCGCTGGTAAGGAGATTTCGGTCAGATA
ATTGATTGCCTGGGCTCGGATGATATCAGATACGTACGTCGACAGCGTGT
GTAGAGTGGTACAGCGAGGTTGCGGCGTGTTTCAGTAATATTACAAAAAA
AGGTAACATTGAAAGACATGAAGTCTAGGTATGAAATGGCATGTAACTTT
TTCGAACTACTCACGTACGTCAAGGGCTGGCTACAGTAGCCGCCAACGTG
GTGCGCTTGATATGGAGGAACTACAGCCGACAGACTGTAGCACATGCATC
GGTTCCATCGAGCGGTGGTTGCCAGTTCGTCAGCGCAAACAGCATCATAC
CATAGAGTTGCGCACGGCGACAAAATGAAGAGAGGACTGCATGCAATACA
GCGGGTGTACTATTGAATTCAGTACATGTATGGAAACAGTGAAAAAAGGA
GAAAACGATGGTGGCAGGCGCGAGTATATCCCAAGAGTTACGTAACGAGT
GATGGCCGCTGCGTGTGTGGCAACCTACCATGCATGATAGTATTCATGGG
CAGAGGAGCAGGGTGGCCTGGCGAGAGTTATGGTACTCGGAACATGATAG
TATGACTGATATTTTTGGTAATTGGTACTTGAGCGTTTTGATTCCTGTTA
TAAAATCGTTTTCTTATTGGTACTTGGGCGTTTGGATTCCCGTTATAAAA
TCGTTTTCTTCTGGGTGTTTTTTTTCGTGCGTCCGGGGTCGATAAAAAAC
GGTTATCCAGTTTTTCTGCAGGCCTATTTCCCTTTGTGCGAACAAACCGC
CTTGTTGCATGTGAGCTGGTTTTGTTTCGTTGATGATTTGATCTGTTCTG
TAACGTTAAGCTCACTTATAACCTCATCTGTACTAAAACAGAAGATCAGG
AATGTTTGCGTGGTGGTGAGATGTTGTCCTGTGTATTAGCCTCTTCAATT
CCGTGTGGCCCACCTCGAATTGTTATTTTGATTCATCTGTTCCTGATCTG
TGTCCATATTATACTTGGATAATTTGTCGAATCATGTATGATGCATTGTC
AGTTTGTATCTAAATAAAGTGTTTCTGATCTGTTACACTAGTTGTTTTCT
ATACGTCCAATCTTGTTTGATTATGTTACAATCCATTATCTGGATGATCT
GTTTCGTTTTTTCGTTCATGTCCCATAAACCAGTGCTTCACGGCGGCTGT
GCTAGTGGAGCTGGCCAGGCGACGGGGCTGGGTGTCGTACGAGCCGTTCA
ACCTCAAAACTGCCATGGCCTGGCTTCCAATCGCTTTCTTCTTCTGCTGC
ATGCTGGTTTCTTCCTTTTTGTCCTACAAGTACATGGGTGTACCCATGGT
GAGAAAGCATAGTTAAGTGCATGGGGTACCTTTTGTCTTGTCCTTACTAA
ACCCAATTTGCTTTACCGCCTGGCAATGGCTTGTGTGTGTTGTCGTTTTT
TTTTTTTAATGTAACACCAGCCCCTCGTATTGTATGATTCAACAAATTCT
TTGTTGAGCAGAGTAAAATACGTGTTTTTTTCAAGGTATTTTACAGTCGA
AAAACAATATTTTCAGAGCTATTTCCCCAGTGATGATACCGAAACGAAAA
TAAAGGCCTTTGTTCGATAAATTTTGCTGTCTGATATAGGAGTGAATTTG
ATCCGGTCTGTGAGTTGCAAAAGCGGTTAGATATACGATTAAAGTACAGG
GGATACCCGCATTAATTAAAGGCCCAAGTAAGTTTGAGGGTCAAATAGCC
TCGTCACCAAACTGAAGTCCCGTATATTTCCCTCATAATATGGCATTTTT
AATGAGGCGTTATTCAATTTGAGAATAGTCTCATCTGTTACTGTGACCTC
GAAGTGGAGTTGTACGACGTAAGGGGGGTCATATCGGCTTGGCATGAAGC
TGAAATCCCATGCATGCCCTTCACAAGAAGGCTTTTTAAGCGTTTCACTA
CCCAAGTCTGAATCCCGTTACCCTCTGAGCAGGTCAACCCATGTAGAAGT
GGACATCATAATCAGCCTACTTTAAAGTTGTTATTCGGTGCCTACGGGAA
AAGCATACTAAGTCCAAGATAAACTTCTAGAAACGGCAGACGCACAGTCC
CTCTTTCGCACCTGACATACACTGCATTGCCCAGCTGTCAAGAGTTGTAT
TCGCCATTTTCCAGGGCTGATGGTTAGTACATGTATCTATCTTTCGGCCG
TTACGAATCCCGGTTCCAGTAGAAGTGAATGAAGGTGACGGTTTGAAGCC
TTTACAGAGACATGAGAAGGCCTTGCTGTTCCCACATACATCTATTGCAT
AGAGCGCTTGTGAGGCTTGGGCATGGTTTCGTGCACAAGGACTATGGACC
TACGCCCGAACGGGTAGGGTAGCTGGTGAACTGAATATGACTGGAAGTCT
AGTCAGAGGTCTTTTAGTGGGTACAACCCCCACACTGCCTACTTGGTTCG
GCCGAACCGGGGTGGTGCCTACCCCGCAGAGGAATAAATAACTCTTCTGT
TGAAGGAAATGTAGATATATTTTGGTAAATACTTGGAGTATGGAAGCATC
GGAAAAAGTTTTTGCCTCAGCCTTCCGGGTGTTCAAAAAAAAAGAAAAAG
GGGGAATTGCACTTACAATAAAGAGCTGCACTTTTCCTATACAACGGCCG
TTTTGCGGTTTAAAGTGTTTAAAGGTTAGGTGATGTGTGTTGATCTATTT
GATTTGTCTTGATGAAATGTGATGCAATGAAATGACACGAAATGAAGCAG
TTCCGGGAAGGATTGATTGGGTTTGCTTTTTGATACCCTCTGGGCAGGTT
ACGGTGTTCAAGAGCTTGACGAACTTGATAATCTTGGCGGGGGACTTCTT
TTGGCACGGACAGAGGGCTTCTCGTTTGGTGATGTTGAGCCTGGCTGTCA
TGACGATTGGGGCTGTACTGGCTTCTTGGAACGACATCGAGTTCTCGTGA
GTGCGCTACTAATGCTTGTATTATCACTTGTAGTGGGATACAGCTATATC
CTCCAGGCCTGGACCAGGGCCCGAAAAAGTCAACGGTGACTCCAAATTAT
GAAAAATGCAGGGAGTTTTTTCGTTTTTGTTTAACTCCCCGGAAGGCTGA
GGCAAAAACCTCTACTGATGCTTACATACTCCCAAGTCTTTACCAAAGTA
TGTCTACATTTCCTCTAACAGAGCAGAGTTATTTATTCCTCTGCGGGGTA
GGCGCCACCCCGCTTCGGCCGAACCAAGTAGGCAGTGTGGGGGTTGCACC
CACTAGAAGACCTCTGACTAGACTTCCAGTCATGCTCAGTTCACCAGCTA
CCCTACCCGTTCGGGAGTAGGTCCGTGGATGCAGGGAGTTTTCTGTTGTC
GTGAGCCTGACTAAATGGTGGAGTGGTCCTGCGACAACATATACTGTTCG
TTGTGTATATCTGTGCCCAGTCGTTACTCTTTGTCATCAAATGGTGAAAG
GAACGACATCAAATTGTAACACCGGATCACGTGAACGGAGAATGGAGCAT
TGACGGAAAATGGTATTTGTGGATGGCTGCCAGGTTGAGGTGCAAAATTG
TTTCACCTCCAAATAGTTTTAGGCATTTCGGAGAGAGATAAAAGATGATG
TCGGGGTAATTAATGGTAGTTTGCTGCAGTAATATAATCTGTCTTGAGCA
AGCAATATCTTGTTGTCGCACTGATGATCGTAGCAGCCTGTTTTCCTCAT
GAGCGCTGGCCATTAAAGGTGTGGTGGCCGAGGATCTTTCGCGTGGACGA
AAGGGTAAGCATGGAGTATTGGCCTTATAGAGTGCAAAGCATTTACTGTA
TGATACGAGAATGTTAAATAGTTCCACTTTCGAAACTCCACAAGAGTTGC
TCATATCTTGAATAGTTTTGATGAGAGAATAATACATTTGAGCTTTTGTA
TCACATATTTGGGTTAATTTAAACCTTGGTACGCGAGATATGCCGAGATT
TAATTAATTAATTAATTAATTATATATATATATATGAGTGCGTTGGAAAA
TAATGTTTTGCTTATCAATCTCAAAGCAAAGGTTGTTACGCATCTATGTC
ATGTTTTGTCTTTAAGATCAGGCCTCTGCGCGTTGGAGGACGCGTTGTCA
GCCTCGAACTCGCAGGGGGTGTAGTGTACGATTGGCATTGTCCCGTGTGC
CTATGGGTCGACGACGCGCACGTTGTGGCTGTGAGCTTCCTGCTTTTGTA
TTTGTTTTCAGATCCGAAGCGCCTGAAATGTTTCGGAGGTGAACATTTTT
GCACCTTCAGCTGGCAGCCATCCGCAAATATCATTCTCCGTCAATGCTCC
ATTCTCTGTCGATATGATCCGGTGTTTTAAATGTCAATTTTTTTAGTCAC
TGATCTATTTCTGTTGACTCATGACTTATAAAACTTAGTGATCAAAATAA
CTTTTAAAGTCATGGTGTTCGTTAAGGTACATGGAAGTAAGAATTGACAT
TTGAACGAAAAAAAGGTACACTTGGAAAAAAGAAAATTACAACAATACGT
GAAGAAGTATGGCCTTTTCTTGTGTTTCAACATGATTGAGAAATACCGTA
GAGCTCACGATATTGTTTACAGGTACCATATTCCCAATTATCGCCCGTCC
CGAAGGAATCGAAGTAGCACTGTAGCATGGAACAAGGAGAGTTGTCACGA
TTATGGACCATGACTTCGCGTGCTGGCTTCAACATTTGCTGTTACTGAAT
GATTGACTATAATGTATACTCAAATATTTTTCAATGGATCAAGACCCGTA
CGAGCCGTGGAGTATGGATTGATGGTGGACAAACATGAACAGATCAAATA
CGATGTAGGGATGGCTCATGGCACAACATGCAGCGAGGATCCGTCTTGTA
CAAATTGCTAGTATAGGAAAATTTACGGATCAAACACGGTGTACAGAAGA
TGCGATCTACCGGTGAAGATGATAGGTGCGATCTGTGCATGATCCCAGTC
GTACAAACGACCTGTGCAGTGGTTGTGTTTTATCACTACACGCGGGATCT
ACGAAGTGATGAATCTAGTATAACGATCGACGTGAAGGTATGTGAATGGT
GCGTTCTGGGTCGGCCGTTCGTTCGTTGATTACGTACCACGGCAGGGTCT
GGGGCTACGTGTGGATGTCGGCCAACTGCTTCGCTACGGCGAGCTACGTG
CTGACCATGAAGTTCGCGACAAGAACCATGAAGCTACCGAAGTTTGGGAT
GGTGTTTTACAACAACCTCTTAGGTCAGTCAGTAAGTAGTCAGCCACTTG
AGTCGATATTGTTTGGAGGATGATGACCTAATATCACTGCTCTGTATCGG
GAACGAACCTGTCTTGTCCCTATTATACCATGGAAAACATTGAAACGCTG
ACCTTGCTAGACCGCCCGACCGTCAAGTATTGGCTCGACAAAGTCTCGAA
CAAACTGTGAGTCTACGTCTCACGATGCAGGACATGAAACGCGAGCCCAG
GGTTAAAGATTTGCGTGGCCCATTGAAAACGCTGCTTCAGGAGTCAGACG
TTGTAGTGACTCTTATTACCCCCCAACACCGAGAACGTTCCGAATGCGTT
GTTCAGTCCTTTTGAGTCTACTGGAATAGAGGCTTTCGAAAACCCATCTT
GACACGTTGATGTTCCCTACTGTACAGCACGTTGTTTGCCAGCGCAAAGG
AATGTTGTGTTTGGGGGTTGACAATCATGAATTCGATGGTCGCACGCGGG
GGGCTGTATTCCTCTTGAATTGATGAAGCTGCGAGGATATTGCTGGTGGT
GGTTCCAGAATAGTATTTCAACTTTGTACTCGACTAACTTGTGAAGGGGG
TATCTTTATCGAGGTTGTGTATCGGTAGAAATGATCTGTACATGATATAT
TGGTAGATCATGTATCCCGATATCTCGATATATTACCATATACCGACAGC
TTTCAGGTTTCGGTTGTTGGGTGCAGGGAGTGCCGGGCGAGCGTAGCGGG
CAGGACACACATCAACCACACAAGCGAGGTTTAATCAGCTTCTCGGAAAA
TCAGCGAGTTGGAACCGTGGTCATCACGTATAAAATCAGCGAGTTGAAAT
ACATTACCTGTAGAAAATGGTCGATGAATCGTATTTATAGCCGGTATCGG
ATAACGCCGATATTTGGCCTAAAAGAAACGATGGATACGGTACACATCGA
TACACAACTACTCTAGACATGGTGCACACATTGTTTCCTTGCGAGAGAGG
GTTGAGTAGTTTTGAAACTAAAGTGAGGGGGATTGGTGGGGTCGTCGTCC
GTCGGTATATCTGTCTGTGCTGTGTGATTTTGTTGATTGTCTTTCAAGGT
ACGTTGATGCTTCTGCCGGTGGCCATCATGCTCGGTGAACTGTGGACGTT
TGATTCCCTGCGCGAAAAGTCCGACAAGATTGGGTTCCTCGACCGGGAGG
ACCTGCACACGCCTTCATACATCTTGTTGAACATATTCGCCGGTGAGTTG
GTTGTTGAGTTGTTGACGTGAATGTGCGTGAATGCTTGCAGCTGTAAATA
TGTTATTGGGGGCGGTTATTTCGAATGCCCTATTCAACATAAGGGCAAAG
TAATTATTTTGATGGACATGGAAGTTAACCAAATATGAGACAAGGAAAAT
ATCCTGATTTTTGACTCACCAAGTTAATATACACGGAAGAAATTCCTCTC
ATGTACGCACTTATAAAAATATCTTTGTTTTCTTCTGAACTGTAAAAATT
AGACTTGTATATTTAGTTATACAAATATCTAAGGACATTGCTGTTAATGT
TCTCTAAAAGAAAAAGCATCAATATTAAAAGTAGTATAACAAGCTTCTCT
ATAAAAATATAACAGATCATGAAGAATTTATAGCTCATTGTCAAAGGTTG
TGCTTTCTGCGTGTTTGTCGCCCTTTTTGTTTGATTCGTGGTATATTTGG
ATCCTTGTATATGCCACCGTTGTTACGCACACATCTGGAATGCAAGATAA
GTAGTTTGAAGAACGGTTGTACTTTTTCTACCTGAAGCGTCAACTGCGTT
TTTCTTGGAAGAGCCAATCTTGATGGATATGTGCAGCCGTAAACGCACAT
ACCCTTCTCACGGGCCTTCGCACATGTCATCTGGGTAACTGTAGGTCAGA
ATCTTTTTTGGGTTCACCCTATGCGTGGGCCGATATGTATGGAACAAACC
ATCAGAAGATACGAAGGATACGGCAGTTTGCACTTGCTGATCTGGAACCG
TTGCGGGTTGTTTATCTGGCAGGGCTGAAAAAAGCGGTTTCGAGAACGAC
ACATAGACCGATGCGTACAGTCACAGTCAGTAAGTACACTGAGATTCGTC
GAGGCCAAGCCAACAGTTCCCCCACCAACCCGGATACTACTGGGTGATGC
GGAGATCGTATTCAGCCGTTGGCCTTGCGTAGCTTGAAACACGGCCAGAG
AGTAGCAGCTAGTCCGTAATATCCGAAACCAGACACCGTTCAATAAATTT
CGTCGCCAATCTCGATTGCCGTCAGTTCTTGGAACCTTTGGGTTTTACAA
ATAGCTTGCAGTAAGAGGTACAGTCAGTTTCATGTATATACGGTTTTGAC
TAATCATCACATGAAATAATGTTTGATCACCATATAGCTTTTTGGCGCCC
CGCCCCTCTCGCACAGGCGTCGACCCTTCGTGTACAAATTAACAACCTGT
GCTCTACAGTGCTCCTCGGCAGGTGGTTTCATGGTTTTGTCTCATATAGG
CCAAGTTCTTAATTGTCAGTGATAGCTTTCGAACACGTCCTGTTTCTGCA
AACAGACGAGATCCAATGACCAGTGCCATTAAACTATTTTTCAAGAAAGT
GGAACCACCCACGAACTTGAAACGGCCATGTGCATACCTTCAATGTGCTT
ACATGACTCATGGTTGTATACATAATCCAGTGGTCATTGTGTTTTCTGAG
GTTGAAAGTCTTCCTCTGGAGGTACGGCTGAGTCAGCCTATTTTAGTCAG
TGAGAAACGGTGTGGGTTGCGATTCGGTGCTTGATCTGTTCGTCCATCTT
CTTATCGGTATCGGTATCGTCATCAACCAGGGAAACGAAGATCTCCAGGA
CTTGTATTTTGCTTGTCTTTTTCATGTGTTTTGATATAAACACTCGTCTG
CACTCTTTTTGACCTTGGCGTCGGCACTTTTGATTTGTAATTTTTACTGC
TTCTGTATTCCTGTCATTCAATATGTCTTAGGCGCTGCTGGCTTCTTCTT
GAACTTCGCTGCTCTGTGGTGCGTGAGTGCCAACTCGGCCACAACGTATG
CCGTCGTCAACACTGTCAACAACGTGAGCGAGAGGGGGGGGAGGGTTGAA
AATTTTGTTCAAGTCAAGTCTGTCACTATAGCCATGTTGAGGATATGCGG
CTCAATTCAAACTTGACTCGACAATACTTATCCGGAAAATTCCACGATCA
ATAAGGGGGTGTTCCTCGTTCGCAAGTCAAGCAAGCGAGCAAGCCGCTAT
TGTGTTGGTAGTCCACTATACGTGGCCAGTTCAGAGATGTACGCTAGTTT
TGTTGTACTCGTGTCGAGCGCTAGGTGGAGTAATGCGGGACGACTAAAGT
CGAAGCTACATGACGTAAAACTATCGCCCGAATGAGAATTGTATAACGGA
GGTACGATAGCTACGTGGCTTATTGACTACTGTATTCTTTATCTACTTAG
GTGGATAACGGACAACGGCGTGTCTCACGGGTGTAAGAGGCGTAGACGTG
GTGACCTTGACAAGCGAGTGCCTCACACAGTATTCATATATGCTGTTAGC
GGATCCTTACTCACTGACCGGTGTAGCCTATTTTGGACTTGGTCGCCACC
TATTTCACATAGTGCCCAAGATATGTTGGACAGGTAAATACCATCATCCG
GTATACGTCACCAGGCCCAGTGCGTGGAGATGAATCACGAGATTAAAAAA
AAAAAAAAACAAGTTCCGATGTAAGAAGTAATTTGTTATCGAATTTTGTT
TTCTTGAGCATGATGTTCTCCGTTCATCAATACCATACCAAGGTAGTGTG
AATTGGATTGTATGACGTGACTTGATGGGATTGACTGCATTGCCCTTTCC
CCCTTACATTTGTCTCTCGTCTCCTCTCGTCTGGTGATTTTGTGATTGCG
TGCAGTTCCCCGTGTCCATCATTGGCTACTTCATGTTCGCTCAGCCGATG
ACGGTGGTGCAGGGCGAGTTCATTGTGGTGAATATCACGGGAGGTTTCAT
CTACTCTTACGCCAAAATCAAGGTAAGGAACAAGGCACTGAGATTTGTTC
TTGTCAAATATTATTCGAATATAAGATGCGCGATGGGGTGATGGATCTCT
CGTCGTGTTTCACTTTCGGTCCAATTCGCAGCTTCCTCGAGTTGGTATTT
ACGTGGCGGAATGTCGTGTATGTGGGGGGAGCGTGAATATTGTTTTTCAT
GTCATCGCTCAGGCGCAGGTTAACTACACTAGCAAAGTGCCGCGCAAATC
GCGGCAGAGGAGACATGACAACGTTGAGTGATGAGGCAATTAACTGGGAT
ACATTACCCATTTTGCGGGCCATCTTTCAGGAACTAACTGTTTCAACCCC
CCGAATAAATACGAATATTTGCAAATGGTTTTCACAAGAAAACGAAATTA
TTCGCCCGAGTTTTAGAATGAGGGGACATATAGAACAAAGTACCCATCCT
TGTTCTTTCGATTTAAGAGTATTATTGATAGTCGTGAATGGTTCGGGCTC
ATTCTGATCCCCAGGCTAATACTTTCAGTTTTTCGTGAAAACCATTTGCA
AGTAATCACGTTTGTCGGGATGAAGTGTTTTCACAGCGAGAATCACTGTC
GTGAATAATGGCTGATTGACTTGTATGTACCCCCCCCCCCCTCCCCATAC
CCCCTACCCCCTACCCCCTAAATTTTTGCATCAATATTGTTTTTCAAGAG
AAGACGTACTGCAGTAGATGATGACTGATTTATTGCACCCGAATTTTTGC
ATCATGGTCATTATATATATATATACATATTCCTTTTCCCAGGAGCAAAA
GGAAAAGGAACAAGTGGAGCTCCAGCGCAATGCAGAAGTAAATGAGGGCA
GTATTGAGGCCGTGCCACTGGTGGCCGATGGGGACCTGAACGAAAAACGT
TCCAACTCGTCTTTCTGAGCTTTTTGGGGTTGAAATGGACAAACAAGCTC
TTTGAGGTTGAAACATTGTCGCGAGTTATTACTTTTTTCTTTTTCTTTTT
CTTTTTTTTTGTGGAAAAAATGTAGAATATAACGTTGTCTAGTGGTCGTG
CCGGCCCCAAAATAGGGTTAGTTTCTCTCTTTGGCCGGTCTTGTGAAGAG
AAATGAGGTTTTATTGTTGGTCTTTTTGACTCTTTGTAGGGCGTATTATT
TAGTAGTCGATGAAGGCGAGGCCTGTGCAAAATAAAGGGTGGGGATTTGG
CCGAAGTGTGAACATTTGTGGCACTCGAGGAATGGATGGGTGTATGGATG
AATGAAGAAATAAACGATATACAGTCGTATATATTCATCTTGCATGTTTG
GTGCAACTTTTTGAATGTACCCCTTCGGATGTAACCTTACATGTACCTTT
TCTGTTGCTCTTGACGTGTGGACCAGGATGTGTTTTTTGTCTCATGATAT
TACAGCAAAGCTATGAGCGGAATTGCCCGGAATAGATAAGCTGTTGCAAT
GTTGTTACTCGTGGGCCATGAATGCGGACTGGATAATTAAGGGGGGAAAT
GGGTCTCGTTGTGGATAATGACGGGGAAATGGCCCCGACCTCCTATGGCT
CATGATGTTTTAAGGAGGGGAATGAAAATACAGGTTTCAGAAGTGTTAAT
GTAATTTTGGCTTGTCGACAACCGCTTTACAAGTCAGAGAGATCGTCCAC
TAGAGATTAGGAAAAGGTGTTGGCAGGACTAGTTCTTTTGTCATGGGTTA
GTTTATCTTTCAATGAATCACATGTTGAGAGGAACGCTTCTTCACATGTA
ACGTCATCCTCAACCGTAACGTCGCTGTTTTAATGAACATGAGGTCCGCT
GATTGATATGGACTAATTGATCCGAATGCCGGAAGAGCTCTTGATATGAT
GCTTTCTGTTATTACAAGTCAGAGTGATACATAGTTAATACATGAGTAAT
TTTAGTCGATAAACGAACCAAGATATGCTCTGTTGTTCGCGTGTGCTTTC
TATTAACCATTGTCTGCGTGCGCACTTATTTTGGACGTTTGAACATATCT
ACGCATCGTGCATGGGCACGCCCATATACGTGTACATGTGCCTTCCCGTG
TGGGTCAAGAAGAGCATATTTTTTAGAGGTCAATTTTGTATACCTTGTAC
ACCGTACTGTTAAAAGTGACCATGAACAAAACGGTAACGGATCCAGCTGA
GGAGCCGTTTCGAGTTAGGAGGGAGAATAACAGTGTCTTCTACTTGGTTC
GGCCGAGCCGGGGTGGCGCCTATCCCGCAGAGGAAAACATGACTGTTCTG
TTG back to topCoding sequence (CDS) from alignment at H-paniculata_contig2455:940..15292- >mRNA_H-paniculata_contig2455.6654.1 ID=mRNA_H-paniculata_contig2455.6654.1|Name=mRNA_H-paniculata_contig2455.6654.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2208bp|location=Sequence derived from alignment at H-paniculata_contig2455:940..15292- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGCTTCCCCAGAGGACATGGAGATGGACAGGCGGCCGCTGCACCGAA
GTTGGGAGAGGTGGCCAACTCCATCGCGTCATGCCTTGCACTCAGCTTCT
TCTCCATCTCGATGATCCTCGCAAATAAGATGAGCTTCCCCAGAGGACAT
GGAGATGGACAGGCGGCCGCTGCACCGAAGTTGGGAGAGGTGGCCAACTC
CATCGCGTCATGCCTTGCACTCAGCTTCTTCTCCATCTCGATGATCCTCG
CAAATAAGGCCCTGGCGTTCAACTTTGATGCAAACATCGATGCGCTTCCA
ATGGCGTTCCAGGCCCTGGCGTTCAACTTTGATGCAAACATCGATGCGCT
TCCAATGGCGTTCCAGTGCTTCACGGCGGCTGTGCTAGTGGAGCTGGCCA
GGCGACGGGGCTGGGTGTCGTACGAGCCGTTCAACCTCAAAACTGCCATG
GCCTGGCTTCCAATCGCTTTCTTCTTCTGCTGCATGCTGGTTTCTTCCTT
TTTGTCCTACAAGTACATGGGTGTACCCATGTGCTTCACGGCGGCTGTGC
TAGTGGAGCTGGCCAGGCGACGGGGCTGGGTGTCGTACGAGCCGTTCAAC
CTCAAAACTGCCATGGCCTGGCTTCCAATCGCTTTCTTCTTCTGCTGCAT
GCTGGTTTCTTCCTTTTTGTCCTACAAGTACATGGGTGTACCCATGGTTA
CGGTGTTCAAGAGCTTGACGAACTTGATAATCTTGGCGGGGGACTTCTTT
TGGCACGGACAGAGGGCTTCTCGTTTGGTGATGTTGAGCCTGGCTGTCAT
GACGATTGGGGCTGTACTGGCTTCTTGGAACGACATCGAGTTCTCGTTAC
GGTGTTCAAGAGCTTGACGAACTTGATAATCTTGGCGGGGGACTTCTTTT
GGCACGGACAGAGGGCTTCTCGTTTGGTGATGTTGAGCCTGGCTGTCATG
ACGATTGGGGCTGTACTGGCTTCTTGGAACGACATCGAGTTCTCGGTCTG
GGGCTACGTGTGGATGTCGGCCAACTGCTTCGCTACGGCGAGCTACGTGC
TGACCATGAAGTTCGCGACAAGAACCATGAAGCTACCGAAGTTTGGGATG
GTGTTTTACAACAACCTCTTAGGGTCTGGGGCTACGTGTGGATGTCGGCC
AACTGCTTCGCTACGGCGAGCTACGTGCTGACCATGAAGTTCGCGACAAG
AACCATGAAGCTACCGAAGTTTGGGATGGTGTTTTACAACAACCTCTTAG
GTACGTTGATGCTTCTGCCGGTGGCCATCATGCTCGGTGAACTGTGGACG
TTTGATTCCCTGCGCGAAAAGTCCGACAAGATTGGGTTCCTCGACCGGGA
GGACCTGCACACGCCTTCATACATCTTGTTGAACATATTCGCCGGTACGT
TGATGCTTCTGCCGGTGGCCATCATGCTCGGTGAACTGTGGACGTTTGAT
TCCCTGCGCGAAAAGTCCGACAAGATTGGGTTCCTCGACCGGGAGGACCT
GCACACGCCTTCATACATCTTGTTGAACATATTCGCCGGCGCTGCTGGCT
TCTTCTTGAACTTCGCTGCTCTGTGGTGCGTGAGTGCCAACTCGGCCACA
ACGTATGCCGTCGTCAACACTGTCAACAACGCGCTGCTGGCTTCTTCTTG
AACTTCGCTGCTCTGTGGTGCGTGAGTGCCAACTCGGCCACAACGTATGC
CGTCGTCAACACTGTCAACAACTTCCCCGTGTCCATCATTGGCTACTTCA
TGTTCGCTCAGCCGATGACGGTGGTGCAGGGCGAGTTCATTGTGGTGAAT
ATCACGGGAGGTTTCATCTACTCTTACGCCAAAATCAAGTTCCCCGTGTC
CATCATTGGCTACTTCATGTTCGCTCAGCCGATGACGGTGGTGCAGGGCG
AGTTCATTGTGGTGAATATCACGGGAGGTTTCATCTACTCTTACGCCAAA
ATCAAGGAGCAAAAGGAAAAGGAACAAGTGGAGCTCCAGCGCAATGCAGA
AGTAAATGAGGGCAGTATTGAGGCCGTGCCACTGGTGGCCGATGGGGACC
TGAACGAAAAACGTTCCAACTCGTCTTTCTGAGAGCAAAAGGAAAAGGAA
CAAGTGGAGCTCCAGCGCAATGCAGAAGTAAATGAGGGCAGTATTGAGGC
CGTGCCACTGGTGGCCGATGGGGACCTGAACGAAAAACGTTCCAACTCGT
CTTTCTGA back to top
|