prot_H-paniculata_contig2454.6651.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2454.6651.1
Unique Nameprot_H-paniculata_contig2454.6651.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length161
Homology
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BLAST of mRNA_H-paniculata_contig2454.6651.1 vs. uniprot
Match: A0A6H5JR94_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR94_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 1.250e-24
Identity = 66/133 (49.62%), Postives = 84/133 (63.16%), Query Frame = 0 
Query:    1 MGCAGSKGDDG--RRNRRLHEIFSVPSPRLSEADQKLTASLKALKLQMDEEQNVSEAFSFTKIILKLGTIERVLKRVKAVFRSVDHGNKGHVTMQELKEGLLKAKV------KRTMANDCLVARFKVDNGFGL 125
            MGC GSK +    +  R++   F  P+P  + A ++L   L+ LK QMDEE    E+FSFTKIILKLGTIE++L R+ AVF+SVDHGNKGHVT  ELKEGL +A V      + T  +DCL      D+  GL
Sbjct:    1 MGCHGSKEETPTCQAPRKMWRSFPPPTP--TSAQRRLIEGLQDLKRQMDEESGGKESFSFTKIILKLGTIEKILHRINAVFQSVDHGNKGHVTKDELKEGLRRAHVDLGDEWEDTNIDDCLQHLHGRDDKVGL 131
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BLAST of mRNA_H-paniculata_contig2454.6651.1 vs. uniprot
Match: D8LMR6_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMR6_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 6.210e-24
Identity = 65/133 (48.87%), Postives = 83/133 (62.41%), Query Frame = 0 
Query:    1 MGCAGSKGDDG--RRNRRLHEIFSVPSPRLSEADQKLTASLKALKLQMDEEQNVSEAFSFTKIILKLGTIERVLKRVKAVFRSVDHGNKGHVTMQELKEGLLKAKV------KRTMANDCLVARFKVDNGFGL 125
            MGC GSK +    +  R++   F   +P  S A ++L   L+ LK QM EE    E+FSFTKIILKLGTIE++L+R+ AVF+SVDHGNKGHVT  ELKEGL +A V      + T  +DCL      D+  GL
Sbjct:    1 MGCHGSKEETPTCQAPRKMWRSFPPSTP--SSAQRRLIEGLQDLKRQMAEESGEKESFSFTKIILKLGTIEKILQRINAVFKSVDHGNKGHVTKDELKEGLHRAHVDLGDEWEDTNIDDCLQHLQGRDDKVGL 131
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2454.6651.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JR94_9PHAE1.250e-2449.62EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D8LMR6_ECTSI6.210e-2448.87EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 70..105
score: 9.743

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2454contigH-paniculata_contig2454:7885..13975 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2454.6651.1mRNA_H-paniculata_contig2454.6651.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2454 7740..14049 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2454.6651.1 ID=prot_H-paniculata_contig2454.6651.1|Name=mRNA_H-paniculata_contig2454.6651.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=161bp
MGCAGSKGDDGRRNRRLHEIFSVPSPRLSEADQKLTASLKALKLQMDEEQ
NVSEAFSFTKIILKLGTIERVLKRVKAVFRSVDHGNKGHVTMQELKEGLL
KAKVKRTMANDCLVARFKVDNGFGLLRIAMFSWIKVQVLFLSPTYCRFSM
RSLKGYKIPG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom