mRNA_H-paniculata_contig2452.6647.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2452.6647.1 vs. uniprot
Match: A0A6H5K446_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K446_9PHAE) HSP 1 Score: 123 bits (309), Expect = 1.640e-31 Identity = 61/71 (85.92%), Postives = 66/71 (92.96%), Query Frame = 1
Query: 1 LYQLLEVDRRATPVEIKRAYRNKSLEMHPDKLNQRGQEVTEQDRAKFQKMKGAYDVLSDPQKREVYDQLGE 213
LY LL++DRRATP E+KRAYRNKSL+MHPDKLNQRGQEVTEQDRA FQKMK AYDVLSDP KRE+YDQLGE
Sbjct: 22 LYSLLDLDRRATPAEVKRAYRNKSLQMHPDKLNQRGQEVTEQDRANFQKMKSAYDVLSDPSKRELYDQLGE 92
BLAST of mRNA_H-paniculata_contig2452.6647.1 vs. uniprot
Match: A0A1E7FJY6_9STRA (J domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FJY6_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 2.220e-23 Identity = 45/70 (64.29%), Postives = 59/70 (84.29%), Query Frame = 1
Query: 4 YQLLEVDRRATPVEIKRAYRNKSLEMHPDKLNQRGQEVTEQDRAKFQKMKGAYDVLSDPQKREVYDQLGE 213
YQLL+++R ATP EIK+AY+ +SL+MHPDKL QRG+ VTE+ +AKF +MK AY++LSDP KRE YD +GE
Sbjct: 2 YQLLDIERDATPEEIKKAYKRQSLQMHPDKLAQRGEVVTEELQAKFTRMKEAYEILSDPHKRETYDAIGE 71
BLAST of mRNA_H-paniculata_contig2452.6647.1 vs. uniprot
Match: A0A7S1YWS1_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YWS1_TRICV) HSP 1 Score: 92.8 bits (229), Expect = 1.870e-20 Identity = 46/70 (65.71%), Postives = 57/70 (81.43%), Query Frame = 1
Query: 4 YQLLEVDRRATPVEIKRAYRNKSLEMHPDKLNQRGQEVTEQDRAKFQKMKGAYDVLSDPQKREVYDQLGE 213
Y LL V+ ATP E+KRAY+ +SLEMHPDKL QRG+EVT +D+A+F +MK AY+VLSDP KRE YD +GE
Sbjct: 28 YDLLGVENDATPEELKRAYKRRSLEMHPDKLAQRGREVTPEDQARFTRMKEAYEVLSDPHKRETYDAIGE 97
BLAST of mRNA_H-paniculata_contig2452.6647.1 vs. uniprot
Match: A0A7S0BVJ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BVJ0_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 2.370e-20 Identity = 42/70 (60.00%), Postives = 55/70 (78.57%), Query Frame = 1
Query: 4 YQLLEVDRRATPVEIKRAYRNKSLEMHPDKLNQRGQEVTEQDRAKFQKMKGAYDVLSDPQKREVYDQLGE 213
Y++L +D + EIKRAY+ +SL MHPDKL Q+GQ VT+ D+A+FQ+MK AY+VLSDP KRE YD +GE
Sbjct: 32 YEMLMIDNDVSQDEIKRAYKRQSLMMHPDKLAQKGQAVTDDDQARFQRMKDAYEVLSDPHKRETYDAIGE 101
BLAST of mRNA_H-paniculata_contig2452.6647.1 vs. uniprot
Match: A0A7R9ZE87_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZE87_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 3.650e-20 Identity = 45/70 (64.29%), Postives = 55/70 (78.57%), Query Frame = 1
Query: 4 YQLLEVDRRATPVEIKRAYRNKSLEMHPDKLNQRGQEVTEQDRAKFQKMKGAYDVLSDPQKREVYDQLGE 213
Y LL VD ATP EIK+AY+ +SL MHPDKL QRG+EVT +D+ +F +MK AY++LSDP KRE YD LGE
Sbjct: 29 YTLLGVDADATPDEIKKAYKRRSLVMHPDKLAQRGKEVTPEDQERFTRMKEAYEILSDPHKRESYDALGE 98
BLAST of mRNA_H-paniculata_contig2452.6647.1 vs. uniprot
Match: A0A7S2RGW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RGW1_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 4.770e-20 Identity = 44/70 (62.86%), Postives = 56/70 (80.00%), Query Frame = 1
Query: 4 YQLLEVDRRATPVEIKRAYRNKSLEMHPDKLNQRGQEVTEQDRAKFQKMKGAYDVLSDPQKREVYDQLGE 213
Y LL V++ AT EIKRAY+ +SL+MHPDKL Q+G+ VTE D+A+F +MK AY+VLSDP KRE YD +GE
Sbjct: 9 YDLLGVEKDATQDEIKRAYKRQSLQMHPDKLAQKGRTVTEVDQARFTRMKEAYEVLSDPHKRETYDAIGE 78
BLAST of mRNA_H-paniculata_contig2452.6647.1 vs. uniprot
Match: A0A7S4JN11_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JN11_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 5.650e-20 Identity = 45/70 (64.29%), Postives = 57/70 (81.43%), Query Frame = 1
Query: 4 YQLLEVDRRATPVEIKRAYRNKSLEMHPDKLNQRGQEVTEQDRAKFQKMKGAYDVLSDPQKREVYDQLGE 213
Y +L +D ATP EIK+AY+ +SLEMHPDKL QRG+EVT +D+A+F +MK AY++LSDP KRE YD LGE
Sbjct: 29 YSILGIDDDATPEEIKKAYKRRSLEMHPDKLAQRGKEVTPEDQARFTRMKEAYEILSDPHKRESYDALGE 98
BLAST of mRNA_H-paniculata_contig2452.6647.1 vs. uniprot
Match: A0A448ZRQ1_9STRA (J domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRQ1_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 6.740e-19 Identity = 44/70 (62.86%), Postives = 56/70 (80.00%), Query Frame = 1
Query: 4 YQLLEVDRRATPVEIKRAYRNKSLEMHPDKLNQRGQEVTEQDRAKFQKMKGAYDVLSDPQKREVYDQLGE 213
Y LL V+ ATP +IKRAY+ +SL+MHPDKL QRG+ VT++DRA+F +MK AY+ LSDP KRE YD +GE
Sbjct: 30 YGLLGVESDATPDQIKRAYKRRSLQMHPDKLAQRGKPVTDEDRARFTRMKDAYECLSDPHKRETYDAIGE 99
BLAST of mRNA_H-paniculata_contig2452.6647.1 vs. uniprot
Match: A0A7S4UY41_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UY41_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.260e-18 Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 1
Query: 4 YQLLEVDRRATPVEIKRAYRNKSLEMHPDKLNQRGQEVTEQDRAKFQKMKGAYDVLSDPQKREVYDQLGE 213
Y+LL ++ A+P EIKRAY+ +SL+MHPDKL QRG++VTE D+A+F +MK AY+VLSDP KR YD +GE
Sbjct: 27 YELLGLEHDASPEEIKRAYKRQSLQMHPDKLAQRGKQVTEADQARFTRMKEAYEVLSDPHKRRTYDAVGE 96
BLAST of mRNA_H-paniculata_contig2452.6647.1 vs. uniprot
Match: B7FY29_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FY29_PHATC) HSP 1 Score: 80.1 bits (196), Expect = 3.550e-18 Identity = 40/69 (57.97%), Postives = 52/69 (75.36%), Query Frame = 1
Query: 4 YQLLEVDRRATPVEIKRAYRNKSLEMHPDKLNQRGQEVTEQDRAKFQKMKGAYDVLSDPQKREVYDQLG 210
Y LL +DR A+ +IKRAY+ +SL+MHPDKL QRG VT D+ +F +MK AY++LSDP KRE YD +G
Sbjct: 18 YTLLNLDRDASVDDIKRAYKRQSLQMHPDKLAQRGHTVTAADQLRFTRMKEAYEILSDPYKREAYDAIG 86 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2452.6647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2452.6647.1 >prot_H-paniculata_contig2452.6647.1 ID=prot_H-paniculata_contig2452.6647.1|Name=mRNA_H-paniculata_contig2452.6647.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=71bp LYQLLEVDRRATPVEIKRAYRNKSLEMHPDKLNQRGQEVTEQDRAKFQKMback to top mRNA from alignment at H-paniculata_contig2452:796..1498- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2452.6647.1 ID=mRNA_H-paniculata_contig2452.6647.1|Name=mRNA_H-paniculata_contig2452.6647.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=703bp|location=Sequence derived from alignment at H-paniculata_contig2452:796..1498- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2452:796..1498- >mRNA_H-paniculata_contig2452.6647.1 ID=mRNA_H-paniculata_contig2452.6647.1|Name=mRNA_H-paniculata_contig2452.6647.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=426bp|location=Sequence derived from alignment at H-paniculata_contig2452:796..1498- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |