prot_H-paniculata_contig245.6641.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig245.6641.1
Unique Nameprot_H-paniculata_contig245.6641.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length177
Homology
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BLAST of mRNA_H-paniculata_contig245.6641.1 vs. uniprot
Match: A0A6H5JZF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF3_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 8.590e-5
Identity = 49/153 (32.03%), Postives = 72/153 (47.06%), Query Frame = 0 
Query:    1 SQGEVTTSNLKRELSRVRRDYIMSTFNQSERHRVLLGGRQ-GSSRQSRVPPNNSSSGSTRSNGFGQVRVSGGGKTIEEWATDTFSAPAKSKMVSRLGSSTLQAFREGGSWEDVFISRVGRIPTSTPGGRQNCLDGMSTRKEDECLSYLLVPHT 152
            S G  T ++L+RELSRVRR++IMST N+SE+   LLG R+ G S Q R  P+  SS         +  V+GGG  +                  +  S  LQ  R   SW++VF+++  +   +    R N     S  +E E   +  V H+
Sbjct:  169 STGRSTATDLRRELSRVRREFIMSTSNRSEQQSALLGSRRKGISSQRRRHPDRDSS--------TKELVAGGGHDL----------------CRKENSRALQKARV--SWDNVFMTKEDQSAETVSDHRSNSGLNKSNAREIEKPIFRHVSHS 295
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig245.6641.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JZF3_9PHAE8.590e-532.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig245contigH-paniculata_contig245:39973..40799 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig245.6641.1mRNA_H-paniculata_contig245.6641.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig245 39973..40799 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig245.6641.1 ID=prot_H-paniculata_contig245.6641.1|Name=mRNA_H-paniculata_contig245.6641.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=177bp
SQGEVTTSNLKRELSRVRRDYIMSTFNQSERHRVLLGGRQGSSRQSRVPP
NNSSSGSTRSNGFGQVRVSGGGKTIEEWATDTFSAPAKSKMVSRLGSSTL
QAFREGGSWEDVFISRVGRIPTSTPGGRQNCLDGMSTRKEDECLSYLLVP
HTPEKASWSHPSCKVGAASSSTSCSR*
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