prot_H-paniculata_contig2447.6628.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2447.6628.1
Unique Nameprot_H-paniculata_contig2447.6628.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length246
Homology
BLAST of mRNA_H-paniculata_contig2447.6628.1 vs. uniprot
Match: A0A6H5L4G7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G7_9PHAE)

HSP 1 Score: 325 bits (832), Expect = 2.290e-109
Identity = 173/225 (76.89%), Postives = 197/225 (87.56%), Query Frame = 0
Query:   22 SQLQPAPLAFDVREIERFRYRVEDTLKKVTRVSVREARAAELKAEMLNSKKLAGYFEEHAGDLKVLRHDKSVLHPLRRLEHLKHIPEYLMPTGLQTGEDPTKRQKKRLKRQRGGVKRRTGHGQEQGRRKDNDPLQTFAAAELGADGSNGTARQDRDGEGVGETAQEVAERLNEERKSRVMQTGDYAGESTSGRRRWQQRRGRGKHGGGG-KRKPKKTGTRFDLPV 245
            S  QPAPLAFD+REIERFRYRVEDTLKKVTRV VREARAAELKAE++NS+KLAGYF+E+AGDLKVLRHDKSVLHPLR+L+HLKHIP+YLMPTGLQTGEDPT+RQ+KR+KR RGG KRR G G +QGRRKDNDPLQTF A+ELGADGS G   +DR         +E A+R+NEER+SRVMQTGD++GESTSGRRRWQQRRG+GKHGGGG K + KKT  RFD+PV
Sbjct:   56 SWAQPAPLAFDIREIERFRYRVEDTLKKVTRVRVREARAAELKAEIINSQKLAGYFKENAGDLKVLRHDKSVLHPLRKLDHLKHIPDYLMPTGLQTGEDPTQRQRKRMKRARGGAKRRQGQGLDQGRRKDNDPLQTFEASELGADGSYGDEEEDR---------KEAAKRMNEERESRVMQTGDFSGESTSGRRRWQQRRGKGKHGGGGNKGRSKKTANRFDMPV 271          
BLAST of mRNA_H-paniculata_contig2447.6628.1 vs. uniprot
Match: D7FNE7_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE7_ECTSI)

HSP 1 Score: 321 bits (822), Expect = 3.410e-101
Identity = 172/225 (76.44%), Postives = 196/225 (87.11%), Query Frame = 0
Query:   22 SQLQPAPLAFDVREIERFRYRVEDTLKKVTRVSVREARAAELKAEMLNSKKLAGYFEEHAGDLKVLRHDKSVLHPLRRLEHLKHIPEYLMPTGLQTGEDPTKRQKKRLKRQRGGVKRRTGHGQEQGRRKDNDPLQTFAAAELGADGSNGTARQDRDGEGVGETAQEVAERLNEERKSRVMQTGDYAGESTSGRRRWQQRRGRGKHGGGG-KRKPKKTGTRFDLPV 245
            S  QPAPLAFD+REIERFRYRVEDTLKKVTRVSVREARAAELKAE++NS+KLAGYF+E+AGDLKVLRHDKSVLHPLR+L+HLKHIP+YLMP GLQTGEDPT+RQ+KR+KR RGG KRR G G +QGRRKDNDPLQTF A+ELGADGS G   + R         +E A+R+NEER+SRVMQTGD++GESTSGRRRWQQRRG+GKHGGGG K + KKT  RFD+PV
Sbjct:  603 SWAQPAPLAFDIREIERFRYRVEDTLKKVTRVSVREARAAELKAEIVNSQKLAGYFKENAGDLKVLRHDKSVLHPLRKLDHLKHIPDYLMPPGLQTGEDPTQRQRKRIKRARGGAKRRQGQGLDQGRRKDNDPLQTFEASELGADGSYGGEEEGR---------KEAAKRMNEERESRVMQTGDFSGESTSGRRRWQQRRGKGKHGGGGNKGRSKKTANRFDMPV 818          
BLAST of mRNA_H-paniculata_contig2447.6628.1 vs. uniprot
Match: A0A835ZDE1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDE1_9STRA)

HSP 1 Score: 149 bits (377), Expect = 8.380e-38
Identity = 76/110 (69.09%), Postives = 89/110 (80.91%), Query Frame = 0
Query:   22 SQLQPAPLAFDVREIERFRYRVEDTLKKVTRVSVREARAAELKAEMLNSKKLAGYFEEHAGDLKVLRHDKSVLHPLRRLEHLKHIPEYLMPTGLQTGEDPTKRQKKRLKR 131
            S+ QPAPLAFD+REIE+FRYRV D  KKVTRV VREARAAEL+ E++NS  L  +F+ H  DL+VLRHDK+ L+P  RL+HLKHIP YLMP GL TGEDPT+RQ KR KR
Sbjct:  475 SRAQPAPLAFDLREIEQFRYRVTDVAKKVTRVMVREARAAELRRELINSHALDAHFKSHPDDLRVLRHDKTALNPALRLDHLKHIPSYLMPAGLATGEDPTERQAKRKKR 584          
BLAST of mRNA_H-paniculata_contig2447.6628.1 vs. uniprot
Match: A0A448YUD8_9STRA (Uncharacterized protein n=5 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448YUD8_9STRA)

HSP 1 Score: 144 bits (364), Expect = 4.930e-36
Identity = 88/203 (43.35%), Postives = 128/203 (63.05%), Query Frame = 0
Query:   23 QLQPAPLAFDVREIERFRYRVEDTLKKVTRVSVREARAAELKAEMLNSKKLAGYFEEHAGDLKVLRHDKSVLHPLRRLEHLKHIPEYLMPTGLQTGEDPTKRQKKRLKRQRGGVKRRTGHGQEQGRRKDNDPLQTFAAAELGADGSNGTARQDRDGEGVGETAQEVAERLNEERKSRVMQTGDYAGESTSGRRRWQQRRGRGK 225
            Q QP+PL FD+REIE FRYRVED  + VT+ S++EARAAEL+AE+LNS++L  +FE++  DL++LRHD+   H  +  EHLKHIP+YL+P G+   +   KR+K++    RGG +RR+            DPLQ+F+  ++  DG  G   +  D   +GE  +   ++  EE K   M T D  G+STSGR  W+++  +GK
Sbjct:  473 QSQPSPLDFDLREIEGFRYRVEDVSRAVTKHSIKEARAAELRAEILNSERLQAHFEDNPNDLQLLRHDRLATHASKVQEHLKHIPKYLLPRGMHVADLNRKRKKRK---NRGGKQRRSAK----------DPLQSFSDGDVNLDGLEGDDFELPD---LGEEGRSEKKQKREEEKKTFMNTHDGTGKSTSGRNAWKEKHRKGK 659          
BLAST of mRNA_H-paniculata_contig2447.6628.1 vs. uniprot
Match: A0A7S0XN96_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S0XN96_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.640e-35
Identity = 86/208 (41.35%), Postives = 124/208 (59.62%), Query Frame = 0
Query:   23 QLQPAPLAFDVREIERFRYRVEDTLKKVTRVSVREARAAELKAEMLNSKKLAGYFEEHAGDLKVLRHDKSVLHPLRRLEHLKHIPEYLMPTGLQTGEDPTKRQKKRLKRQRGGVKRRTGHGQEQGRRKDNDPLQTFAA-----AELGADGSNGTARQDRDGEGVGETAQEVAERLNEERKSRVMQTGDYAGESTSGRRRWQQRRGRGK 225
            Q QP PL FD++EIE FRYRVED  + VT+V++RE RAAE+KAE+LNS++L  +F+E+  DL++L+HD+      +  +HLKH+P Y++P G+Q  E   KR+KK+ + QR    R      E+GR K NDPLQ F         +G DG +  A  D D    G    EV  +  + ++       D  G+ST+GR  W+Q+  +GK
Sbjct:  167 QRQPCPLDFDLKEIEGFRYRVEDVARAVTKVAIRETRAAEVKAEILNSERLQAHFDENPADLQLLQHDRQATKISKVQDHLKHVPTYMLPRGMQVAEVSRKRRKKKTRSQRIAASR-----AERGRNKSNDPLQNFDGDVNMDGLVGDDGDDNEAEVDEDKFFEGVEEDEVVTKAEKNQQYLETMQDDGYGKSTAGRNAWKQKHNKGK 369          
BLAST of mRNA_H-paniculata_contig2447.6628.1 vs. uniprot
Match: A0A4D9D2A0_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2A0_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.190e-32
Identity = 71/140 (50.71%), Postives = 95/140 (67.86%), Query Frame = 0
Query:   20 GGSQLQPAPLAFDVREIERFRYRVEDTLKKVTRVSVREARAAELKAEMLNSKKLAGYFEEHAGDLKVLRHDKSVLHPLRRLEHLKHIPEYLMPTGLQTGEDPTKRQKKRLKRQRGGVKRRTGHGQEQGRRKDNDPLQTFA 159
            G  + QP PLAFD++E+E FRYRVED  + VTR++V+EAR AE+K E+LNS+ L  +F+E+  + ++LRHDK +L   R  EHLKH+P+YL+P G++ G DP    KK       G KR  G G +  RRK NDPLQ FA
Sbjct:  105 GALRTQPTPLAFDLKELEGFRYRVEDVRRAVTRMAVKEARLAEIKQELLNSQALKTHFQENPHEFQILRHDKGLLPSHRVQEHLKHVPDYLLPDGMRVGADPAA--KKXXXXXXAGRKRAVGQGADPQRRKGNDPLQHFA 242          
BLAST of mRNA_H-paniculata_contig2447.6628.1 vs. uniprot
Match: A0A7S1XW79_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XW79_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.250e-31
Identity = 63/109 (57.80%), Postives = 85/109 (77.98%), Query Frame = 0
Query:   23 QLQPAPLAFDVREIERFRYRVEDTLKKVTRVSVREARAAELKAEMLNSKKLAGYFEEHAGDLKVLRHDKSVLHPLRRLEHLKHIPEYLMPTGLQTGEDPT-KRQKKRLK 130
            Q QPAPL FD+ EI  FRYRV+D  + VT VS++EARAAELKAE+LN+ +L  YF+E+  DL++LRHDK+V+HP R  EHL+ +P YL+P G+  GEDP+ K+ +KRL+
Sbjct:  153 QRQPAPLPFDMNEIATFRYRVDDVKRSVTSVSIKEARAAELKAELLNNARLQAYFDENPQDLQLLRHDKAVMHPTRMQEHLRSVPGYLIPDGIDVGEDPSLKKYRKRLR 261          
BLAST of mRNA_H-paniculata_contig2447.6628.1 vs. uniprot
Match: A0A1Z5KBW1_FISSO (ATP-dependent RNA helicase DDX56/DBP9 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBW1_FISSO)

HSP 1 Score: 129 bits (323), Expect = 1.910e-30
Identity = 84/211 (39.81%), Postives = 124/211 (58.77%), Query Frame = 0
Query:   25 QPAPLAFDVREIERFRYRVEDTLKKVTRVSVREARAAELKAEMLNSKKLAGYFEEHAGDLKVLRHDKSVLHPLRRLEHLKHIPEYLMPTGLQTGEDPTKRQKKRLKRQRGGVKRRTGHGQEQGRRKDNDPLQTFAAAELGADGSNGTARQDRDGEGV-------GETAQEVAERLNEERKSRVMQTGDYAGESTSGRRRWQQRRGRGKHGG 228
            QP+PL FD+ E+E FRYRVED  + VT+ +VREARA ELK E+LNS++L  +F+E+  DL++LRHD+   +  + L+HLKH+P+YL+P G+Q      KR+KK++K           HG    RRKDNDPLQ+F     G D S+     D + + +       G   +E   +  + +      T D  G+ST+GR  W+Q+  +G+  G
Sbjct:  459 QPSPLDFDLAEVEGFRYRVEDVGRAVTKNTVREARANELKMELLNSERLESHFDENPADLQLLRHDRLATNVSKVLDHLKHVPKYLLPKGMQVANLNKKRKKKKVK-----------HGTGGERRKDNDPLQSF-----GGDKSSNDIDGDMEHDPLVAEFMDDGTDDEEGPSKKQKTQSEIFANTRDGTGQSTAGRNAWKQKHKKGQFSG 653          
BLAST of mRNA_H-paniculata_contig2447.6628.1 vs. uniprot
Match: K0QZR5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0QZR5_THAOC)

HSP 1 Score: 129 bits (323), Expect = 2.070e-30
Identity = 89/216 (41.20%), Postives = 127/216 (58.80%), Query Frame = 0
Query:   23 QLQPAPLAFDVREIERFRYRVEDTLKKVTRVSVREARAAELKAEMLNSKKLAGYFEEHAGDLKVLRHDKSVLHPLRRLEHLKHIPEYLMPTGLQTGEDPTKRQKKRLKRQRGGVKRRTGHGQEQGRRKDNDPLQTFAA---------AELGADGSNGTARQDR---DGEGVGETAQEVAERLNEERKSRVMQTGDYAGESTSGRRRWQQRRGRGKH 226
            Q QP PL FD++EIE FRYRVED  + VTRV+V+E RAAE+KAE+LNS++L  +FE +  DL++L+HD+   H  +   HLK++P YL+P G+Q      KR+KK  + Q     +R   G++  R K NDPLQTF            E    G +G   +DR   D +G G+      E   EE+ +  ++   Y GESTSGR +W++   +GK+
Sbjct:  482 QAQPGPLEFDLKEIEGFRYRVEDVNRAVTRVAVKETRAAEVKAEILNSERLQAHFEANPADLQLLQHDRQATHVSKVQSHLKNVPGYLLPRGMQVANVSRKRRKKXTRSQ-----QRAAAGRQ--RNKSNDPLQTFDGDVAVDGLIDVEDEEGGESGGLDEDRFFDDDDGEGD------EMTKEEKNAAYLEDNAY-GESTSGRDKWKRAHRKGKY 683          
BLAST of mRNA_H-paniculata_contig2447.6628.1 vs. uniprot
Match: A0A7R9UC43_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UC43_9STRA)

HSP 1 Score: 127 bits (320), Expect = 5.720e-30
Identity = 59/102 (57.84%), Postives = 81/102 (79.41%), Query Frame = 0
Query:   23 QLQPAPLAFDVREIERFRYRVEDTLKKVTRVSVREARAAELKAEMLNSKKLAGYFEEHAGDLKVLRHDKSVLHPLRRLEHLKHIPEYLMPTGLQTGEDPTKR 124
            Q QP+ L FDV+EI  FRYRVED  + VT ++++EARAAELK EMLN+ +L  YFEE+  DL++LRHDK++LHP R  +HLKH+P+YL+P G++ G DP++R
Sbjct:  562 QKQPSALPFDVKEIATFRYRVEDVKRSVTAIAIKEARAAELKQEMLNNARLQNYFEENPQDLQLLRHDKTILHPTRVQDHLKHVPDYLIPDGIEVGADPSQR 663          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2447.6628.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4G7_9PHAE2.290e-10976.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNE7_ECTSI3.410e-10176.44DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835ZDE1_9STRA8.380e-3869.09DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A448YUD8_9STRA4.930e-3643.35Uncharacterized protein n=5 Tax=Pseudo-nitzschia T... [more]
A0A7S0XN96_9STRA1.640e-3541.35Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]
A0A4D9D2A0_9STRA1.190e-3250.71Helicase C-terminal domain-containing protein n=1 ... [more]
A0A7S1XW79_9STRA2.250e-3157.80Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A1Z5KBW1_FISSO1.910e-3039.81ATP-dependent RNA helicase DDX56/DBP9 n=2 Tax=Fist... [more]
K0QZR5_THAOC2.070e-3041.20Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7R9UC43_9STRA5.720e-3057.84Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2447contigH-paniculata_contig2447:942..4645 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2447.6628.1mRNA_H-paniculata_contig2447.6628.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2447 837..5418 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2447.6628.1 ID=prot_H-paniculata_contig2447.6628.1|Name=mRNA_H-paniculata_contig2447.6628.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=246bp
MGAQGAAEWGGVVGGQGYGGGSQLQPAPLAFDVREIERFRYRVEDTLKKV
TRVSVREARAAELKAEMLNSKKLAGYFEEHAGDLKVLRHDKSVLHPLRRL
EHLKHIPEYLMPTGLQTGEDPTKRQKKRLKRQRGGVKRRTGHGQEQGRRK
DNDPLQTFAAAELGADGSNGTARQDRDGEGVGETAQEVAERLNEERKSRV
MQTGDYAGESTSGRRRWQQRRGRGKHGGGGKRKPKKTGTRFDLPV*
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