prot_H-paniculata_contig24454.6625.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24454.6625.1
Unique Nameprot_H-paniculata_contig24454.6625.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length118
Homology
BLAST of mRNA_H-paniculata_contig24454.6625.1 vs. uniprot
Match: A0A6H5KWQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ8_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 2.960e-41
Identity = 79/118 (66.95%), Postives = 89/118 (75.42%), Query Frame = 0
Query:    1 MFEMFYLTDELLYYALKHEGFVGDVALRLANLVYLSVFRHEMFKAIGKRPETGGS-GERAPVFLRRWAAHLNHFLGYFPYPK--PMILPLVDLRLSLAPCFEALPAGDTDRAREGTPT 115
            +FEMF +TDELL+YALKHEG VG+  L+LANLVY  VFRHE+F A       GG  G+ APVFLRRW AH+NHFLGYFP P+  P ILPLVD+R SLAP F ALPAGD  R REG PT
Sbjct: 3398 IFEMFNITDELLFYALKHEGRVGEFPLKLANLVYTVVFRHEIFVAFAALALDGGDDGDGAPVFLRRWGAHVNHFLGYFPCPQAQPSILPLVDMRRSLAPFFAALPAGDKGRTREGVPT 3515          
BLAST of mRNA_H-paniculata_contig24454.6625.1 vs. uniprot
Match: A0A835YYQ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYQ9_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 3.690e-9
Identity = 31/37 (83.78%), Postives = 34/37 (91.89%), Query Frame = 0
Query:    2 FEMFYLTDELLYYALKHEGFVGDVALRLANLVYLSVF 38
            FEM YLTDELLYYALKHEG+VGD AL+LANL+Y SVF
Sbjct: 2237 FEMLYLTDELLYYALKHEGYVGDFALKLANLLY-SVF 2272          
BLAST of mRNA_H-paniculata_contig24454.6625.1 vs. uniprot
Match: A0A7S0ZEV6_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZEV6_9RHOD)

HSP 1 Score: 56.2 bits (134), Expect = 8.930e-7
Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 0
Query:    1 MFEMFYLTDELLYYALKHEGFVGDVALRLANLVYLSVFRHEMFKA-IGKRPETGGSGERAPVF---LRRWAAHLNHFLGYFP 78
            +FEM Y+TDEL+YYAL+      +  + LAN++Y  VF+H +F   I    ++  S    PV    L  +   L HFL YFP
Sbjct:  412 LFEMHYVTDELVYYALRDPS---EAVIELANVLYSFVFKHSIFSEFIHHAFDSSRSNAHIPVMPRVLAPFVGQLTHFLSYFP 490          
BLAST of mRNA_H-paniculata_contig24454.6625.1 vs. uniprot
Match: A0A7S3A8C9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A8C9_9RHOD)

HSP 1 Score: 52.8 bits (125), Expect = 1.620e-5
Identity = 27/78 (34.62%), Postives = 42/78 (53.85%), Query Frame = 0
Query:    1 MFEMFYLTDELLYYALKHEGFVGDVALRLANLVYLSVFRHEMFKAIGKRPETGGSGERAPVFLRRWAAHLNHFLGYFP 78
            +FEM Y+TDEL+Y+AL+H       ALR+A +++  +F+  +F    +         R    +  WA  L +FL YFP
Sbjct: 2785 LFEMHYVTDELVYFALRHGP---SSALRIATMLFSFIFKQSVFSTSLQADHGSAIASR---LIAPWAGQLRYFLSYFP 2856          
BLAST of mRNA_H-paniculata_contig24454.6625.1 vs. uniprot
Match: F0WAF4_9STRA (Uncharacterized protein AlNc14C45G3681 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WAF4_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 2.220e-5
Identity = 33/103 (32.04%), Postives = 47/103 (45.63%), Query Frame = 0
Query:    2 FEMFYLTDELLYYALKHEGFVGDVALRLANLVYLSVFRHEMFKAIG--------------------------KRPETGGSGERAPVFLRRWAAHLNHFLGYFP 78
            F+ +Y+TDEL++Y ++ EG    V L LANLVY +VF HE+F+                             K P++       P  L+ W   L HFL +FP
Sbjct: 3871 FDFYYITDELVWYGVRREGGRTRV-LMLANLVYSTVFSHEIFQTFATFYAITCGASNCEGNPIQGYCLLSQSKLPKSCNIA--LPTILKPWIQQLGHFLSFFP 3970          
BLAST of mRNA_H-paniculata_contig24454.6625.1 vs. uniprot
Match: A0A024GCH3_9STRA (Uncharacterized protein n=8 Tax=Albugo candida TaxID=65357 RepID=A0A024GCH3_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 3.030e-5
Identity = 34/101 (33.66%), Postives = 46/101 (45.54%), Query Frame = 0
Query:    2 FEMFYLTDELLYYALKHEGFVGDVALRLANLVYLSVFRHEMFKA-IGKRPETGGSGERA-----------------------PVFLRRWAAHLNHFLGYFP 78
            F+ +Y+TDEL++Y ++ EG    V L LANLVY +VF HE+F   +     T G   R                        P  L+ W   L HFL +FP
Sbjct: 3858 FDFYYITDELVWYGVRREGGRTRV-LMLANLVYSTVFSHEIFHTFVSLYALTCGDANRQGSINQGYTHLAQVKLANSCNIPLPKTLKPWIQQLGHFLSFFP 3957          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24454.6625.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KWQ8_9PHAE2.960e-4166.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YYQ9_9STRA3.690e-983.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0ZEV6_9RHOD8.930e-739.02Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A7S3A8C9_9RHOD1.620e-534.62Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
F0WAF4_9STRA2.220e-532.04Uncharacterized protein AlNc14C45G3681 n=1 Tax=Alb... [more]
A0A024GCH3_9STRA3.030e-533.66Uncharacterized protein n=8 Tax=Albugo candida Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 39..117
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24454contigH-paniculata_contig24454:1410..3215 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24454.6625.1mRNA_H-paniculata_contig24454.6625.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24454 1288..3333 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24454.6625.1 ID=prot_H-paniculata_contig24454.6625.1|Name=mRNA_H-paniculata_contig24454.6625.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=118bp
MFEMFYLTDELLYYALKHEGFVGDVALRLANLVYLSVFRHEMFKAIGKRP
ETGGSGERAPVFLRRWAAHLNHFLGYFPYPKPMILPLVDLRLSLAPCFEA
LPAGDTDRAREGTPTPE*
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