prot_H-paniculata_contig2445.6622.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2445.6622.1
Unique Nameprot_H-paniculata_contig2445.6622.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length403
Homology
BLAST of mRNA_H-paniculata_contig2445.6622.1 vs. uniprot
Match: D8LIR0_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIR0_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 1.000e-88
Identity = 148/220 (67.27%), Postives = 175/220 (79.55%), Query Frame = 0
Query:  185 DGAEVDIARARSAWMIFLSHNREKVRKENPGLAVGPMQKILSAMWKGLDEKESARYAKLAADDKARMKKELADAGLTSLPVKKSTPVSIGGSSPTDLILPLARVRKTIRLDPTVGNITKEGLQLVAKATEVFMEVMADRAWRVGRQTGRKSVKPCDLADYIFASPELYWLRDEFRLERSSVKKSANKLETSGKASVG--KKPTPPVATGAKAITSFFKKA 402
            DG++  IARARSAWM+FL+ NRE VRKE+PGLAVGPMQKILS MWK L E E ARYAKLAA+DK R+K ELA AGLT LP K S+  ++ G  PT L+LPLARVRKT+RLDP+VGNI+KEGL LV KATEVFM V+AD AW +GRQTGRKSV+PCD+AD++FA+PE+YWL+DEFR ERSSVKK  ++ E  G  + G  K     V  GAK ITSFF+KA
Sbjct:  177 DGSK--IARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSEMWKALGEAEVARYAKLAAEDKERVKNELAAAGLTKLPTKNSSSAAVAGG-PTSLVLPLARVRKTVRLDPSVGNISKEGLLLVTKATEVFMAVLADHAWNIGRQTGRKSVRPCDVADFVFAAPEMYWLKDEFREERSSVKKKQSRPEAGGAKAAGATKAGVTAVPKGAKPITSFFQKA 393          
BLAST of mRNA_H-paniculata_contig2445.6622.1 vs. uniprot
Match: A0A836CK92_9STRA (HMG box domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK92_9STRA)

HSP 1 Score: 135 bits (339), Expect = 1.620e-32
Identity = 78/214 (36.45%), Postives = 120/214 (56.07%), Query Frame = 0
Query:  191 IARARSAWMIFLSHNREKVRKENPGLAVGPMQKILSAMWKGLDEKESARYAKLAADDKARMKKELADAGLTSLPV---KKSTPVSIGGSSPTDLILPLARVRKTIRLDPTVGNITKEGLQLVAKATEVFMEVMADRAWRVGRQTGRKSVKPCDLADYIFASPELYWLRDEFRLERSSVKKSANKLETSGKASVGKKPTPPVATGAKAITSFFKK 401
            I RA+SAWM FL+  R++V K NPG  +G + K  S +W  +  +E   Y   AA+DKAR+++EL  AGLT LP    +      +   + T ++LPL+RVRKT ++D  V +I  +GL  +AKATE+F+  +A R+W   RQ+GR++++  D+A  + A   LY+LR+E                     ++   P      G+K+ITSFF +
Sbjct:  142 IKRAQSAWMFFLADKRDEVVKANPGARIGAVVKECSGIWAAMPPEEKQVYEAQAAEDKARLQRELQAAGLTKLPSAGNRSGEERDLPPDATTTILLPLSRVRKTAKMDAEVKSINADGLATIAKATELFIATLAKRSWGAARQSGRRNLRVTDIAQCVDADGALYFLREELATMAXXXXXXXXXXXXXXXXALAAGP------GSKSITSFFAR 349          
BLAST of mRNA_H-paniculata_contig2445.6622.1 vs. uniprot
Match: A0A448Z0U5_9STRA (HMG box domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z0U5_9STRA)

HSP 1 Score: 120 bits (302), Expect = 2.330e-27
Identity = 71/209 (33.97%), Postives = 110/209 (52.63%), Query Frame = 0
Query:  191 IARARSAWMIFLSHNREKVRKENPGLAVGPMQKILSAMWKGLDEKESARYAKLAADDKARMKKELADAGLTSLPVKKSTPVSIGGSSPTDLILPLARVRKTIRLDPTVGNITKEGLQLVAKATEVFMEVMADRAWRVGRQTGRKSVKPCDLADYIFASPELYWLRDEFRLERSSVKKSANKLETSGKASVGKKPTPPVATGAKAITSFF 399
            + RAR+A+ IF    R  ++KE+PG  V    K + A WK L + E  R+  LAA +K R+        L SLP     PV   GS    L+ P+AR+R+  +LDP V  +++E LQLVA+A E+ +  +     RV R   R+++ P D+AD        ++LR++ R   ++ +K + K E +  A   +K     A G K +TS+F
Sbjct:  132 LKRARTAYFIFADEQRPSIQKEHPGETVAVQAKRIGARWKSLPDAEKDRFRALAAAEKERV--------LASLPEGAPGPVGDAGSPSDSLVFPVARIRRIAKLDPEVKTLSREALQLVARAAELALARLGTECVRVARMQNRRTLLPDDVADVCTHREAFHFLREDIRDLAAAQQKGSGKAEAAAAAGRAEKAKREAAAGTKPLTSYF 332          
BLAST of mRNA_H-paniculata_contig2445.6622.1 vs. uniprot
Match: A0A024TN45_9STRA (HMG box domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TN45_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.150e-26
Identity = 80/223 (35.87%), Postives = 111/223 (49.78%), Query Frame = 0
Query:  185 DGAEVDIARARSAWMIFLSHNREKVRKENPGLAVGPMQKILSAMWKGLDEKESARYAKLAADDKARMKKE---LADAGLTSLPVKKSTPVSIGGSSPTD--LILPLARVRKTIRLDPTVGNITKEGLQLVAKATEVFMEVMADRAWRVGRQTGRKSVKPCDLADYIFASPELYWLRDEFRLERSSVKKSANKLETSGKASVGKKPTPPVATGAKAITSFFKKA 402
            D +   +++  SA+  FL+ NR  V  ENPGL +GP+QKILS  W  LD  E   Y   A +DK R  KE   L D G     +    P +    S  D  L LP ARV++ ++ DP V  ++KE +  + KATE F++ +  +         RK+VK  D+   I + P L WLRD+F  ER+    +  K   +     G  PTPP       ITSFF +A
Sbjct:   93 DASSKKLSKPLSAYFHFLAENRAAVIAENPGLGIGPVQKILSTKWNELDAVEKEPYVAKATEDKQRYMKEKQALVDRG-----IDVDAPSTKRAKSSDDHVLTLPNARVKRIMQTDPDVHKVSKEAVLAITKATEQFIQFLTTKGHDSAVMAKRKTVKNSDVLQAIHSHPTLDWLRDDFP-ERTKPPPATKKEAVAP----GTAPTPPAPPATSRITSFFTRA 305          
BLAST of mRNA_H-paniculata_contig2445.6622.1 vs. uniprot
Match: A0A6G0XNA3_9STRA (HMG box domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XNA3_9STRA)

HSP 1 Score: 116 bits (290), Expect = 2.400e-26
Identity = 70/211 (33.18%), Postives = 119/211 (56.40%), Query Frame = 0
Query:  191 IARARSAWMIFLSHNREKVRKENPGLAVGPMQKILSAMWKGLDEKESARYAKLAADDKARMKKELADAGLTSLPVKKSTPVSIGGSSPTDLILPLARVRKTIRLDPTVGNITKEGLQLVAKATEVFMEVMADRAWRVGRQTGRKSVKPCDLADYIFASPELYWLRDEFRLERSSVKKSANKLETSGKASVGKKPTPPVATGAKAITSFFKK 401
            + + +SA+  FL+ NR K  +ENPG+ +GP+QK+LS  W  L  +E   + +LAA DK R +KE        + +   +   I  +    L LPLARV++ +  DP V  ++K+    +AKATE F++ +A +++     + RK++K  D+   I +   L WLRD+F  E+SS K    + +++ K++    P+ P  + A+ ITS+F +
Sbjct:   56 LVKPQSAYFHFLAANRAKFAEENPGVGIGPLQKLLSTRWNELTPEEKEPFVELAAADKERYRKEEQALIEQGIDISALSNKKISTTDENTLTLPLARVKRIVMTDPDVQKLSKDASLAIAKATEQFIQFLAAKSYDSASISKRKTIKDSDVLQAIHSHTMLDWLRDDFP-EKSSTKLQPQQQQSASKSATETAPSLP--SNAR-ITSYFTR 262          
BLAST of mRNA_H-paniculata_contig2445.6622.1 vs. uniprot
Match: D7G2P1_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P1_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 4.380e-25
Identity = 58/169 (34.32%), Postives = 96/169 (56.80%), Query Frame = 0
Query:  192 ARARSAWMIFLSHNREKVRKENPGLAVGPMQKILSAMWKGLDEKESARYAKLAADDKARMKKELADAGLTSLPVKKSTPVSIGGSSPTDLILPLARVRKTIRLDPTVGNITKEGLQLVAKATEVFMEVMADRAWRVGRQTGRKSVKPCDLADYIFASPELYWLRDEFRL 360
            ++ +SAWM+F+   RE+V+++NP +AV   QKI+S +WK L   E   Y   A DD+ R K E AD  +     K+    +      T+L+ P+ R+ + I+LD  V ++TKE   L+ KA E+F  +MA  ++ V +   R+ +K  D+ D +    + YW++D+F L
Sbjct:  141 SKPQSAWMLFIQERREQVKRDNPDIAVTQQQKIMSEIWKTLASDEREAYRTRARDDQKRYKAEQADKPVVK---KEEFYTNDEKGQSTELVCPMGRIGRIIKLDQDVQSVTKEATALIGKAMELFTSLMAKESFSVAQSQNRRLLKLQDITDIMHNQDQFYWIKDDFPL 306          
BLAST of mRNA_H-paniculata_contig2445.6622.1 vs. uniprot
Match: A0A1V9ZFH9_9STRA (HMG box domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZFH9_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.150e-24
Identity = 72/214 (33.64%), Postives = 115/214 (53.74%), Query Frame = 0
Query:  191 IARARSAWMIFLSHNREKVRKENPGLAVGPMQKILSAMWKGLDEKESARYAKLAADDKARMKKELADAGLTSLPVKKSTPVSIGGSSPTDLILPLARVRKTIRLDPTVGNITKEGLQLVAKATEVFMEVMADRAWRVGRQTGRKSVKPCDLADYIFASPELYWLRDEF--RLERSSVKKSANKLETSGKASVGKKPTPPVATGAKAITSFFKKA 402
            +++ +SA+  FL+  R +V+ +NPG A+G +QKIL   WK L  +E   Y +LA DDK R  KE A+     + ++   P     +S   L LP ARV++ I  D  V  ++K+ L  + KATE+F++ +A + +     + RK++K  DL   I     L WLRD+F     RS+V+  A K+ +  + S            A +I+SFF++A
Sbjct:   61 VSKPQSAYFHFLAAKRGEVKADNPGAAIGAIQKILGTKWKELTSEEKEPYIQLALDDKERYAKEKAELLARGIDIE---PEKTTVASEDVLSLPCARVKRIINADQDVSKVSKDALIAITKATELFIKYLAAKGYDSAMISKRKTIKDSDLIQVIHGHGALDWLRDDFPQTSSRSAVEPKAAKVSSRTEPS----------GNAPSISSFFQRA 261          
BLAST of mRNA_H-paniculata_contig2445.6622.1 vs. uniprot
Match: A0A6H5KV94_9PHAE (HMG box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV94_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 2.320e-24
Identity = 58/169 (34.32%), Postives = 96/169 (56.80%), Query Frame = 0
Query:  192 ARARSAWMIFLSHNREKVRKENPGLAVGPMQKILSAMWKGLDEKESARYAKLAADDKARMKKELADAGLTSLPVKKSTPVSIGGSSPTDLILPLARVRKTIRLDPTVGNITKEGLQLVAKATEVFMEVMADRAWRVGRQTGRKSVKPCDLADYIFASPELYWLRDEFRL 360
            ++ +SAWM+F+   RE+V+++NP +AV   QKI+S +WK L   E   Y   A DD+ R K E AD  +     K+    +      T+L+ P+ R+ + I+LD  V ++TKE   L+ KA E+F  +MA  ++ V +   R+ +K  D+ D +    + YW++D+F L
Sbjct:  248 SKPQSAWMLFIQERREQVKRDNPDIAVTQQQKIMSEIWKTLASDEREAYRTRARDDQKRYKAEQADKPVVK---KEEFYTNDEKGQSTELVCPMGRIGRIIKLDQDVQSVTKEATALIGKAMELFTSLMAKESFSVAQSQNRRLLKLQDITDIMHNQDQFYWIKDDFPL 413          
BLAST of mRNA_H-paniculata_contig2445.6622.1 vs. uniprot
Match: A0A484E291_BRELC (HMG box domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E291_BRELC)

HSP 1 Score: 101 bits (251), Expect = 2.280e-21
Identity = 57/170 (33.53%), Postives = 94/170 (55.29%), Query Frame = 0
Query:  191 IARARSAWMIFLSHNREKVRKENPGLAVGPMQKILSAMWKGLDEKESARYAKLAADDKARMKKELADAGLTSLPVKKSTPVSIGGSS--PTDLILPLARVRKTIRLDPTVGNITKEGLQLVAKATEVFMEVMADRAWRVGRQTGRKSVKPCDLADYIFASPELYWLRDEF 358
            + + +S+++IF +  R  V  +N G+ +G +QKI+SA W  L  KE   Y +LAA+DKAR  +EL D      P  K  P  I  ++      + PL RVRK ++ D  V  ++K+ L  +AKA+E+F +++  +++       ++ VK  D+A  I  +  L WLR +F
Sbjct:    3 VKKPQSSYLIFCNEQRRHVMNDNAGVRIGEIQKIISAQWNQLTPKEKDFYVQLAANDKARYNQELLDN-----PQIKEEPSDIDKTALISNTCLYPLGRVRKIVQSDSDVSKVSKDALVAIAKASELFAQLLGIKSYEQALYRNKRQVKTSDVARAIQTTASLDWLRQDF 167          
BLAST of mRNA_H-paniculata_contig2445.6622.1 vs. uniprot
Match: W4H0Q5_9STRA (HMG box domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H0Q5_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 3.580e-20
Identity = 72/226 (31.86%), Postives = 114/226 (50.44%), Query Frame = 0
Query:  181 TSSVDGAEVDIARARSAWMIFLSHNREKVRKENPGLAVGPMQKILSAMWKGLDEKESARYAKLAADDKARM---KKELADAGLTSLPVKKSTPVSIGGSSPTDLILPLARVRKTIRLDPTVGNITKEGLQLVAKATEVFMEVMADRAWRVGRQTGRKSVKPCDLADYIFASPELYWLRDEF-RLERSSVKKSANKLETSGKASVGKKPTPPVATGAKA-ITSFFKK 401
            T   D +   +A+  SA+  FL+ NR  V  ENPGL +GP+QKILS  W  L  +    +  +AA DK R    K+ L D G+      +     +  +  + L LP ARV++ +  DP V  ++K+ +  V KATE+F+  +A +       + RK+VK  D+   I +   L WLRD+F   ++  V    +K   +       + +P  ++ AK+ ITSFF +
Sbjct:   59 TLEQDVSVTKLAKPLSAYFHFLAANRAIVVAENPGLGIGPVQKILSTKWNELSAEAKEPFTTMAAADKERYLNDKQSLMDQGIDIEAAPR-----VPRNDESLLTLPSARVKRIMLTDPDVNKLSKDSVLAVTKATELFIHFLATKGHDSATISKRKTVKDSDVLTAIHSHAVLDWLRDDFPESKKVPVAAKLSKKSAAHSNVAATEASPSSSSSAKSKITSFFSR 279          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2445.6622.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIR0_ECTSI1.000e-8867.27HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836CK92_9STRA1.620e-3236.45HMG box domain-containing protein n=1 Tax=Tribonem... [more]
A0A448Z0U5_9STRA2.330e-2733.97HMG box domain-containing protein n=1 Tax=Pseudo-n... [more]
A0A024TN45_9STRA1.150e-2635.87HMG box domain-containing protein n=1 Tax=Aphanomy... [more]
A0A6G0XNA3_9STRA2.400e-2633.18HMG box domain-containing protein n=1 Tax=Aphanomy... [more]
D7G2P1_ECTSI4.380e-2534.32HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
A0A1V9ZFH9_9STRA1.150e-2433.64HMG box domain-containing protein n=1 Tax=Achlya h... [more]
A0A6H5KV94_9PHAE2.320e-2434.32HMG box domain-containing protein n=1 Tax=Ectocarp... [more]
A0A484E291_BRELC2.280e-2133.53HMG box domain-containing protein n=1 Tax=Bremia l... [more]
W4H0Q5_9STRA3.580e-2031.86HMG box domain-containing protein n=2 Tax=Aphanomy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 190..260
e-value: 2.6E-13
score: 60.2
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 192..256
e-value: 1.7E-15
score: 57.2
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 191..259
score: 14.095
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 187..259
e-value: 9.3E-16
score: 59.9
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 190..257
IPR009072Histone-foldGENE3D1.10.20.10coord: 278..345
e-value: 1.4E-14
score: 56.0
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 276..366
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 283..341
e-value: 9.1E-12
score: 45.1
NoneNo IPR availablePANTHERPTHR13711SWI/SNF-RELATED CHROMATIN BINDING PROTEINcoord: 193..259

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2445contigH-paniculata_contig2445:5562..19577 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2445.6622.1mRNA_H-paniculata_contig2445.6622.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2445 5487..19645 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2445.6622.1 ID=prot_H-paniculata_contig2445.6622.1|Name=mRNA_H-paniculata_contig2445.6622.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=403bp
MNKAMGLPVDSSVDLDYAPVAAGSHGLSMDKEAQRSPKRRRKSSDTVSDE
QDIRPSTSVQDAPHLVGLEGRGKQQSMNGNVASVVSGELSSRGNEGPVDR
EDCDADHMKEERHAGGEHGQEKNAQEVEGEARDEKRSGVGEKEDSAQEEI
IADEDIGGNEEDQEEEEVDEEGDGGGGVDKTSSVDGAEVDIARARSAWMI
FLSHNREKVRKENPGLAVGPMQKILSAMWKGLDEKESARYAKLAADDKAR
MKKELADAGLTSLPVKKSTPVSIGGSSPTDLILPLARVRKTIRLDPTVGN
ITKEGLQLVAKATEVFMEVMADRAWRVGRQTGRKSVKPCDLADYIFASPE
LYWLRDEFRLERSSVKKSANKLETSGKASVGKKPTPPVATGAKAITSFFK
KA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
IPR036910HMG_box_dom_sf
IPR009072Histone-fold
IPR003958CBFA_NFYB_domain