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Homology
BLAST of mRNA_H-paniculata_contig2445.6622.1 vs. uniprot
Match: D8LIR0_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIR0_ECTSI) HSP 1 Score: 284 bits (726), Expect = 1.590e-88 Identity = 148/220 (67.27%), Postives = 175/220 (79.55%), Query Frame = 3
Query: 621 DGAEVDIARARSAWMIFLSHNREKVRKENPGLAVGPMQKILSAMWKGLDEKESARYAKLAADDKARMKKELADAGLTSLPVKKSTPVSIGGSSPTDLILPLARVRKTIRLDPTVGNITKEGLQLVAKATEVFMEVMADRAWRVGRQTGRKSVKPCDLADYIFASPELYWLRDEFRLERSSVKKSANKLETSGKASVG--KKPTPPVATGAKAITSFFKKA 1274
DG++ IARARSAWM+FL+ NRE VRKE+PGLAVGPMQKILS MWK L E E ARYAKLAA+DK R+K ELA AGLT LP K S+ ++ G PT L+LPLARVRKT+RLDP+VGNI+KEGL LV KATEVFM V+AD AW +GRQTGRKSV+PCD+AD++FA+PE+YWL+DEFR ERSSVKK ++ E G + G K V GAK ITSFF+KA
Sbjct: 177 DGSK--IARARSAWMLFLADNREGVRKEHPGLAVGPMQKILSEMWKALGEAEVARYAKLAAEDKERVKNELAAAGLTKLPTKNSSSAAVAGG-PTSLVLPLARVRKTVRLDPSVGNISKEGLLLVTKATEVFMAVLADHAWNIGRQTGRKSVRPCDVADFVFAAPEMYWLKDEFREERSSVKKKQSRPEAGGAKAAGATKAGVTAVPKGAKPITSFFQKA 393
BLAST of mRNA_H-paniculata_contig2445.6622.1 vs. uniprot
Match: A0A836CK92_9STRA (HMG box domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK92_9STRA) HSP 1 Score: 135 bits (340), Expect = 2.740e-32 Identity = 78/214 (36.45%), Postives = 120/214 (56.07%), Query Frame = 3
Query: 639 IARARSAWMIFLSHNREKVRKENPGLAVGPMQKILSAMWKGLDEKESARYAKLAADDKARMKKELADAGLTSLPV---KKSTPVSIGGSSPTDLILPLARVRKTIRLDPTVGNITKEGLQLVAKATEVFMEVMADRAWRVGRQTGRKSVKPCDLADYIFASPELYWLRDEFRLERSSVKKSANKLETSGKASVGKKPTPPVATGAKAITSFFKK 1271
I RA+SAWM FL+ R++V K NPG +G + K S +W + +E Y AA+DKAR+++EL AGLT LP + + + T ++LPL+RVRKT ++D V +I +GL +AKATE+F+ +A R+W RQ+GR++++ D+A + A LY+LR+E ++ P G+K+ITSFF +
Sbjct: 142 IKRAQSAWMFFLADKRDEVVKANPGARIGAVVKECSGIWAAMPPEEKQVYEAQAAEDKARLQRELQAAGLTKLPSAGNRSGEERDLPPDATTTILLPLSRVRKTAKMDAEVKSINADGLATIAKATELFIATLAKRSWGAARQSGRRNLRVTDIAQCVDADGALYFLREELATMAXXXXXXXXXXXXXXXXALAAGP------GSKSITSFFAR 349
BLAST of mRNA_H-paniculata_contig2445.6622.1 vs. uniprot
Match: A0A448Z0U5_9STRA (HMG box domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z0U5_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.320e-27 Identity = 73/215 (33.95%), Postives = 112/215 (52.09%), Query Frame = 3
Query: 639 IARARSAWMIFLSHNREKVRKENPGLAVGPMQKILSAMWKGLDEKESARYAKLAADDKARMKKELADAGLTSLPVKKSTPVSIGGSSPTDLILPLARVRKTIRLDPTVGNITKEGLQLVAKATEVFMEVMADRAWRVGRQTGRKSVKPCDLADYIFASPELYWLRDEFRLERSSVKKSANKLETSGKASVGKKPTPPVATGAKAITSFFKKA*DT 1283
+ RAR+A+ IF R ++KE+PG V K + A WK L + E R+ LAA +K R+ L SLP PV GS L+ P+AR+R+ +LDP V +++E LQLVA+A E+ + + RV R R+++ P D+AD ++LR++ R ++ +K + K E + A +K A G K +TS+F A T
Sbjct: 132 LKRARTAYFIFADEQRPSIQKEHPGETVAVQAKRIGARWKSLPDAEKDRFRALAAAEKERV--------LASLPEGAPGPVGDAGSPSDSLVFPVARIRRIAKLDPEVKTLSREALQLVARAAELALARLGTECVRVARMQNRRTLLPDDVADVCTHREAFHFLREDIRDLAAAQQKGSGKAEAAAAAGRAEKAKREAAAGTKPLTSYFGVAGGT 338
BLAST of mRNA_H-paniculata_contig2445.6622.1 vs. uniprot
Match: A0A024TN45_9STRA (HMG box domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TN45_9STRA) HSP 1 Score: 119 bits (298), Expect = 8.720e-27 Identity = 80/223 (35.87%), Postives = 111/223 (49.78%), Query Frame = 3
Query: 621 DGAEVDIARARSAWMIFLSHNREKVRKENPGLAVGPMQKILSAMWKGLDEKESARYAKLAADDKARMKKE---LADAGLTSLPVKKSTPVSIGGSSPTD--LILPLARVRKTIRLDPTVGNITKEGLQLVAKATEVFMEVMADRAWRVGRQTGRKSVKPCDLADYIFASPELYWLRDEFRLERSSVKKSANKLETSGKASVGKKPTPPVATGAKAITSFFKKA 1274
D + +++ SA+ FL+ NR V ENPGL +GP+QKILS W LD E Y A +DK R KE L D G + P + S D L LP ARV++ ++ DP V ++KE + + KATE F++ + + RK+VK D+ I + P L WLRD+F ER+ + K + G PTPP ITSFF +A
Sbjct: 93 DASSKKLSKPLSAYFHFLAENRAAVIAENPGLGIGPVQKILSTKWNELDAVEKEPYVAKATEDKQRYMKEKQALVDRG-----IDVDAPSTKRAKSSDDHVLTLPNARVKRIMQTDPDVHKVSKEAVLAITKATEQFIQFLTTKGHDSAVMAKRKTVKNSDVLQAIHSHPTLDWLRDDFP-ERTKPPPATKKEAVAP----GTAPTPPAPPATSRITSFFTRA 305
BLAST of mRNA_H-paniculata_contig2445.6622.1 vs. uniprot
Match: A0A6G0XNA3_9STRA (HMG box domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XNA3_9STRA) HSP 1 Score: 116 bits (291), Expect = 3.380e-26 Identity = 69/211 (32.70%), Postives = 115/211 (54.50%), Query Frame = 3
Query: 639 IARARSAWMIFLSHNREKVRKENPGLAVGPMQKILSAMWKGLDEKESARYAKLAADDKARMKKELADAGLTSLPVKKSTPVSIGGSSPTDLILPLARVRKTIRLDPTVGNITKEGLQLVAKATEVFMEVMADRAWRVGRQTGRKSVKPCDLADYIFASPELYWLRDEFRLERSSVKKSANKLETSGKASVGKKPTPPVATGAKAITSFFKK 1271
+ + +SA+ FL+ NR K +ENPG+ +GP+QK+LS W L +E + +LAA DK R +KE + + + I + L LPLARV++ + DP V ++K+ +AKATE F++ +A +++ + RK++K D+ I + L WLRD+F E+SS K + +++ K++ T P ITS+F +
Sbjct: 56 LVKPQSAYFHFLAANRAKFAEENPGVGIGPLQKLLSTRWNELTPEEKEPFVELAAADKERYRKEEQALIEQGIDISALSNKKISTTDENTLTLPLARVKRIVMTDPDVQKLSKDASLAIAKATEQFIQFLAAKSYDSASISKRKTIKDSDVLQAIHSHTMLDWLRDDFP-EKSSTKLQPQQQQSASKSATE---TAPSLPSNARITSYFTR 262
BLAST of mRNA_H-paniculata_contig2445.6622.1 vs. uniprot
Match: D7G2P1_ECTSI (HMG box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P1_ECTSI) HSP 1 Score: 114 bits (284), Expect = 8.340e-25 Identity = 58/169 (34.32%), Postives = 96/169 (56.80%), Query Frame = 3
Query: 642 ARARSAWMIFLSHNREKVRKENPGLAVGPMQKILSAMWKGLDEKESARYAKLAADDKARMKKELADAGLTSLPVKKSTPVSIGGSSPTDLILPLARVRKTIRLDPTVGNITKEGLQLVAKATEVFMEVMADRAWRVGRQTGRKSVKPCDLADYIFASPELYWLRDEFRL 1148
++ +SAWM+F+ RE+V+++NP +AV QKI+S +WK L E Y A DD+ R K E AD + K+ + T+L+ P+ R+ + I+LD V ++TKE L+ KA E+F +MA ++ V + R+ +K D+ D + + YW++D+F L
Sbjct: 141 SKPQSAWMLFIQERREQVKRDNPDIAVTQQQKIMSEIWKTLASDEREAYRTRARDDQKRYKAEQADKPVVK---KEEFYTNDEKGQSTELVCPMGRIGRIIKLDQDVQSVTKEATALIGKAMELFTSLMAKESFSVAQSQNRRLLKLQDITDIMHNQDQFYWIKDDFPL 306
BLAST of mRNA_H-paniculata_contig2445.6622.1 vs. uniprot
Match: A0A1V9ZFH9_9STRA (HMG box domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZFH9_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.540e-24 Identity = 72/214 (33.64%), Postives = 115/214 (53.74%), Query Frame = 3
Query: 639 IARARSAWMIFLSHNREKVRKENPGLAVGPMQKILSAMWKGLDEKESARYAKLAADDKARMKKELADAGLTSLPVKKSTPVSIGGSSPTDLILPLARVRKTIRLDPTVGNITKEGLQLVAKATEVFMEVMADRAWRVGRQTGRKSVKPCDLADYIFASPELYWLRDEF--RLERSSVKKSANKLETSGKASVGKKPTPPVATGAKAITSFFKKA 1274
+++ +SA+ FL+ R +V+ +NPG A+G +QKIL WK L +E Y +LA DDK R KE A+ + ++ P +S L LP ARV++ I D V ++K+ L + KATE+F++ +A + + + RK++K DL I L WLRD+F RS+V+ A K+ + + S A +I+SFF++A
Sbjct: 61 VSKPQSAYFHFLAAKRGEVKADNPGAAIGAIQKILGTKWKELTSEEKEPYIQLALDDKERYAKEKAELLARGIDIE---PEKTTVASEDVLSLPCARVKRIINADQDVSKVSKDALIAITKATELFIKYLAAKGYDSAMISKRKTIKDSDLIQVIHGHGALDWLRDDFPQTSSRSAVEPKAAKVSSRTEPS----------GNAPSISSFFQRA 261
BLAST of mRNA_H-paniculata_contig2445.6622.1 vs. uniprot
Match: A0A6H5KV94_9PHAE (HMG box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV94_9PHAE) HSP 1 Score: 114 bits (284), Expect = 4.460e-24 Identity = 58/169 (34.32%), Postives = 96/169 (56.80%), Query Frame = 3
Query: 642 ARARSAWMIFLSHNREKVRKENPGLAVGPMQKILSAMWKGLDEKESARYAKLAADDKARMKKELADAGLTSLPVKKSTPVSIGGSSPTDLILPLARVRKTIRLDPTVGNITKEGLQLVAKATEVFMEVMADRAWRVGRQTGRKSVKPCDLADYIFASPELYWLRDEFRL 1148
++ +SAWM+F+ RE+V+++NP +AV QKI+S +WK L E Y A DD+ R K E AD + K+ + T+L+ P+ R+ + I+LD V ++TKE L+ KA E+F +MA ++ V + R+ +K D+ D + + YW++D+F L
Sbjct: 248 SKPQSAWMLFIQERREQVKRDNPDIAVTQQQKIMSEIWKTLASDEREAYRTRARDDQKRYKAEQADKPVVK---KEEFYTNDEKGQSTELVCPMGRIGRIIKLDQDVQSVTKEATALIGKAMELFTSLMAKESFSVAQSQNRRLLKLQDITDIMHNQDQFYWIKDDFPL 413
BLAST of mRNA_H-paniculata_contig2445.6622.1 vs. uniprot
Match: A0A484E291_BRELC (HMG box domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E291_BRELC) HSP 1 Score: 101 bits (251), Expect = 3.740e-21 Identity = 57/170 (33.53%), Postives = 94/170 (55.29%), Query Frame = 3
Query: 639 IARARSAWMIFLSHNREKVRKENPGLAVGPMQKILSAMWKGLDEKESARYAKLAADDKARMKKELADAGLTSLPVKKSTPVSIGGSS--PTDLILPLARVRKTIRLDPTVGNITKEGLQLVAKATEVFMEVMADRAWRVGRQTGRKSVKPCDLADYIFASPELYWLRDEF 1142
+ + +S+++IF + R V +N G+ +G +QKI+SA W L KE Y +LAA+DKAR +EL D P K P I ++ + PL RVRK ++ D V ++K+ L +AKA+E+F +++ +++ ++ VK D+A I + L WLR +F
Sbjct: 3 VKKPQSSYLIFCNEQRRHVMNDNAGVRIGEIQKIISAQWNQLTPKEKDFYVQLAANDKARYNQELLDN-----PQIKEEPSDIDKTALISNTCLYPLGRVRKIVQSDSDVSKVSKDALVAIAKASELFAQLLGIKSYEQALYRNKRQVKTSDVARAIQTTASLDWLRQDF 167
BLAST of mRNA_H-paniculata_contig2445.6622.1 vs. uniprot
Match: W4H0Q5_9STRA (HMG box domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H0Q5_9STRA) HSP 1 Score: 100 bits (250), Expect = 2.270e-20 Identity = 72/226 (31.86%), Postives = 114/226 (50.44%), Query Frame = 3
Query: 609 TSSVDGAEVDIARARSAWMIFLSHNREKVRKENPGLAVGPMQKILSAMWKGLDEKESARYAKLAADDKARM---KKELADAGLTSLPVKKSTPVSIGGSSPTDLILPLARVRKTIRLDPTVGNITKEGLQLVAKATEVFMEVMADRAWRVGRQTGRKSVKPCDLADYIFASPELYWLRDEF-RLERSSVKKSANKLETSGKASVGKKPTPPVATGAKA-ITSFFKK 1271
T D + +A+ SA+ FL+ NR V ENPGL +GP+QKILS W L + + +AA DK R K+ L D G+ + + + + L LP ARV++ + DP V ++K+ + V KATE+F+ +A + + RK+VK D+ I + L WLRD+F ++ V +K + + +P ++ AK+ ITSFF +
Sbjct: 59 TLEQDVSVTKLAKPLSAYFHFLAANRAIVVAENPGLGIGPVQKILSTKWNELSAEAKEPFTTMAAADKERYLNDKQSLMDQGIDIEAAPR-----VPRNDESLLTLPSARVKRIMLTDPDVNKLSKDSVLAVTKATELFIHFLATKGHDSATISKRKTVKDSDVLTAIHSHAVLDWLRDDFPESKKVPVAAKLSKKSAAHSNVAATEASPSSSSSAKSKITSFFSR 279
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 119.8 |
| Seed ortholog evalue | 3e-24 |
| Seed eggNOG ortholog | 157072.XP_008876230.1 |
| Preferred name | HMGB2 |
| KEGG rclass | RC02795 |
| KEGG ko | ko:K03004,ko:K03506,ko:K08066,ko:K10802,ko:K11295,ko:K11296,ko:K11297,ko:K11656,ko:K15413 |
| KEGG Reaction | R00375,R00376,R00377,R00378,R00435,R00441,R00442,R00443 |
| KEGG Pathway | ko00230,ko00240,ko01100,ko03020,ko03030,ko03410,ko03420,ko04140,ko04217,ko04612,ko05152,ko05166,ko05168,ko05203,map00230,map00240,map01100,map03020,map03030,map03410,map03420,map04140,map04217,map04612,map05152,map05166,map05168,map05203 |
| KEGG Module | M00182,M00263 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000122,GO:0000217,GO:0000228,GO:0000400,GO:0000401,GO:0000402,GO:0000405,GO:0000723,GO:0000737,GO:0000785,GO:0000790,GO:0000793,GO:0000902,GO:0000976,GO:0001067,GO:0001158,GO:0001530,GO:0001654,GO:0001667,GO:0001708,GO:0001773,GO:0001775,GO:0001776,GO:0001780,GO:0001786,GO:0001816,GO:0001817,GO:0001818,GO:0001819,GO:0001932,GO:0001934,GO:0001935,GO:0001936,GO:0001938,GO:0002053,GO:0002119,GO:0002164,GO:0002200,GO:0002218,GO:0002221,GO:0002224,GO:0002237,GO:0002250,GO:0002252,GO:0002253,GO:0002262,GO:0002263,GO:0002270,GO:0002274,GO:0002275,GO:0002281,GO:0002283,GO:0002285,GO:0002286,GO:0002287,GO:0002292,GO:0002293,GO:0002294,GO:0002312,GO:0002322,GO:0002366,GO:0002376,GO:0002407,GO:0002437,GO:0002443,GO:0002444,GO:0002446,GO:0002460,GO:0002520,GO:0002521,GO:0002562,GO:0002643,GO:0002682,GO:0002683,GO:0002684,GO:0002685,GO:0002687,GO:0002688,GO:0002690,GO:0002694,GO:0002695,GO:0002696,GO:0002697,GO:0002703,GO:0002706,GO:0002709,GO:0002755,GO:0002757,GO:0002758,GO:0002759,GO:0002764,GO:0002790,GO:0002791,GO:0002793,GO:0002819,GO:0002822,GO:0002831,GO:0002832,GO:0002834,GO:0002837,GO:0002840,GO:0002920,GO:0002921,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003681,GO:0003682,GO:0003684,GO:0003690,GO:0003697,GO:0003700,GO:0003723,GO:0003725,GO:0003727,GO:0003824,GO:0003887,GO:0005102,GO:0005125,GO:0005178,GO:0005488,GO:0005515,GO:0005539,GO:0005543,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005700,GO:0005730,GO:0005737,GO:0005768,GO:0005769,GO:0005829,GO:0005886,GO:0005981,GO:0006109,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006265,GO:0006266,GO:0006268,GO:0006275,GO:0006281,GO:0006282,GO:0006284,GO:0006308,GO:0006309,GO:0006310,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006338,GO:0006355,GO:0006357,GO:0006725,GO:0006807,GO:0006810,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006897,GO:0006909,GO:0006915,GO:0006921,GO:0006928,GO:0006935,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0006974,GO:0006996,GO:0006997,GO:0007010,GO:0007154,GO:0007162,GO:0007165,GO:0007166,GO:0007204,GO:0007267,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007289,GO:0007346,GO:0007379,GO:0007389,GO:0007399,GO:0007423,GO:0007444,GO:0007548,GO:0007623,GO:0008047,GO:0008097,GO:0008104,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008156,GO:0008201,GO:0008219,GO:0008283,GO:0008284,GO:0008289,GO:0008301,GO:0008348,GO:0008406,GO:0008584,GO:0008622,GO:0008623,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009266,GO:0009306,GO:0009408,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009743,GO:0009746,GO:0009749,GO:0009791,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009968,GO:0009986,GO:0009987,GO:0010033,GO:0010243,GO:0010464,GO:0010468,GO:0010469,GO:0010506,GO:0010508,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010594,GO:0010595,GO:0010596,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010631,GO:0010632,GO:0010633,GO:0010634,GO:0010646,GO:0010647,GO:0010648,GO:0010675,GO:0010676,GO:0010720,GO:0010858,GO:0010906,GO:0010907,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0010975,GO:0010976,GO:0012501,GO:0012505,GO:0014070,GO:0014910,GO:0014911,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016055,GO:0016192,GO:0016444,GO:0016477,GO:0016604,GO:0016605,GO:0016740,GO:0016772,GO:0016779,GO:0016829,GO:0017025,GO:0017055,GO:0018130,GO:0019207,GO:0019209,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019439,GO:0019725,GO:0019843,GO:0019887,GO:0019899,GO:0019904,GO:0019953,GO:0019955,GO:0019956,GO:0019958,GO:0022008,GO:0022407,GO:0022408,GO:0022409,GO:0022411,GO:0022412,GO:0022414,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030003,GO:0030029,GO:0030030,GO:0030036,GO:0030097,GO:0030098,GO:0030100,GO:0030141,GO:0030154,GO:0030155,GO:0030162,GO:0030182,GO:0030217,GO:0030234,GO:0030262,GO:0030295,GO:0030323,GO:0030324,GO:0030334,GO:0030335,GO:0030336,GO:0030545,GO:0030595,GO:0031010,GO:0031099,GO:0031100,GO:0031175,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031331,GO:0031333,GO:0031344,GO:0031346,GO:0031347,GO:0031349,GO:0031399,GO:0031401,GO:0031410,GO:0031491,GO:0031493,GO:0031497,GO:0031532,GO:0031960,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0032069,GO:0032070,GO:0032071,GO:0032072,GO:0032075,GO:0032101,GO:0032102,GO:0032103,GO:0032147,GO:0032200,GO:0032268,GO:0032270,GO:0032386,GO:0032387,GO:0032392,GO:0032423,GO:0032425,GO:0032479,GO:0032481,GO:0032496,GO:0032501,GO:0032502,GO:0032504,GO:0032507,GO:0032508,GO:0032640,GO:0032642,GO:0032647,GO:0032648,GO:0032649,GO:0032651,GO:0032652,GO:0032653,GO:0032655,GO:0032675,GO:0032677,GO:0032680,GO:0032689,GO:0032722,GO:0032727,GO:0032728,GO:0032731,GO:0032732,GO:0032733,GO:0032735,GO:0032755,GO:0032757,GO:0032760,GO:0032868,GO:0032872,GO:0032874,GO:0032879,GO:0032880,GO:0032881,GO:0032940,GO:0032943,GO:0032944,GO:0032946,GO:0032989,GO:0032991,GO:0033032,GO:0033034,GO:0033036,GO:0033151,GO:0033157,GO:0033218,GO:0033365,GO:0033554,GO:0033674,GO:0033993,GO:0034061,GO:0034097,GO:0034121,GO:0034123,GO:0034134,GO:0034135,GO:0034137,GO:0034142,GO:0034143,GO:0034145,GO:0034162,GO:0034163,GO:0034165,GO:0034284,GO:0034341,GO:0034504,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034728,GO:0034774,GO:0035218,GO:0035282,GO:0035295,GO:0035326,GO:0035710,GO:0035711,GO:0035767,GO:0035868,GO:0036230,GO:0036336,GO:0040011,GO:0040012,GO:0040013,GO:0040017,GO:0040025,GO:0042056,GO:0042088,GO:0042093,GO:0042100,GO:0042102,GO:0042104,GO:0042110,GO:0042113,GO:0042116,GO:0042119,GO:0042127,GO:0042129,GO:0042221,GO:0042277,GO:0042325,GO:0042327,GO:0042330,GO:0042393,GO:0042493,GO:0042575,GO:0042592,GO:0042742,GO:0042766,GO:0042886,GO:0042981,GO:0042995,GO:0043005,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043277,GO:0043280,GO:0043281,GO:0043299,GO:0043312,GO:0043367,GO:0043370,GO:0043371,GO:0043388,GO:0043408,GO:0043410,GO:0043434,GO:0043467,GO:0043470,GO:0043471,GO:0043535,GO:0043536,GO:0043537,GO:0043542,GO:0043549,GO:0043565,GO:0043900,GO:0043901,GO:0043933,GO:0044085,GO:0044087,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044378,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044433,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044459,GO:0044464,GO:0044703,GO:0044877,GO:0045055,GO:0045063,GO:0045087,GO:0045088,GO:0045089,GO:0045121,GO:0045137,GO:0045165,GO:0045184,GO:0045185,GO:0045321,GO:0045322,GO:0045577,GO:0045578,GO:0045580,GO:0045581,GO:0045595,GO:0045596,GO:0045597,GO:0045619,GO:0045620,GO:0045637,GO:0045638,GO:0045639,GO:0045646,GO:0045648,GO:0045652,GO:0045654,GO:0045661,GO:0045663,GO:0045664,GO:0045666,GO:0045739,GO:0045765,GO:0045766,GO:0045785,GO:0045787,GO:0045806,GO:0045819,GO:0045859,GO:0045860,GO:0045862,GO:0045892,GO:0045893,GO:0045898,GO:0045913,GO:0045931,GO:0045934,GO:0045935,GO:0045937,GO:0045944,GO:0046006,GO:0046328,GO:0046330,GO:0046483,GO:0046546,GO:0046631,GO:0046632,GO:0046634,GO:0046636,GO:0046637,GO:0046639,GO:0046649,GO:0046651,GO:0046661,GO:0046700,GO:0046822,GO:0046823,GO:0046825,GO:0046826,GO:0046903,GO:0046982,GO:0046983,GO:0048018,GO:0048232,GO:0048468,GO:0048471,GO:0048511,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048545,GO:0048569,GO:0048583,GO:0048584,GO:0048585,GO:0048608,GO:0048609,GO:0048666,GO:0048699,GO:0048731,GO:0048771,GO:0048856,GO:0048869,GO:0048870,GO:0048872,GO:0048878,GO:0050663,GO:0050670,GO:0050671,GO:0050673,GO:0050678,GO:0050679,GO:0050704,GO:0050706,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050716,GO:0050718,GO:0050727,GO:0050764,GO:0050765,GO:0050767,GO:0050769,GO:0050776,GO:0050777,GO:0050778,GO:0050786,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050829,GO:0050830,GO:0050831,GO:0050839,GO:0050863,GO:0050864,GO:0050865,GO:0050866,GO:0050867,GO:0050868,GO:0050869,GO:0050870,GO:0050896,GO:0050900,GO:0050918,GO:0050920,GO:0050921,GO:0050926,GO:0050927,GO:0050930,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051051,GO:0051052,GO:0051053,GO:0051054,GO:0051093,GO:0051094,GO:0051098,GO:0051099,GO:0051101,GO:0051103,GO:0051105,GO:0051106,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051222,GO:0051223,GO:0051224,GO:0051234,GO:0051235,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051249,GO:0051250,GO:0051251,GO:0051252,GO:0051253,GO:0051254,GO:0051270,GO:0051271,GO:0051272,GO:0051276,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051384,GO:0051450,GO:0051457,GO:0051480,GO:0051641,GO:0051651,GO:0051674,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0051861,GO:0051960,GO:0051962,GO:0052547,GO:0052548,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0060205,GO:0060249,GO:0060255,GO:0060260,GO:0060284,GO:0060326,GO:0060341,GO:0060429,GO:0060541,GO:0060548,GO:0060627,GO:0060633,GO:0061041,GO:0061458,GO:0061695,GO:0062012,GO:0062013,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070182,GO:0070201,GO:0070302,GO:0070304,GO:0070372,GO:0070374,GO:0070491,GO:0070555,GO:0070603,GO:0070661,GO:0070663,GO:0070665,GO:0070727,GO:0070873,GO:0070875,GO:0070887,GO:0071103,GO:0071216,GO:0071219,GO:0071222,GO:0071310,GO:0071345,GO:0071347,GO:0071396,GO:0071637,GO:0071639,GO:0071640,GO:0071642,GO:0071675,GO:0071677,GO:0071702,GO:0071704,GO:0071705,GO:0071706,GO:0071824,GO:0071840,GO:0071897,GO:0071944,GO:0072091,GO:0072341,GO:0072503,GO:0072507,GO:0072595,GO:0080090,GO:0080134,GO:0080135,GO:0090025,GO:0090026,GO:0090087,GO:0090130,GO:0090132,GO:0090303,GO:0090304,GO:0090305,GO:0090317,GO:0097100,GO:0097159,GO:0097194,GO:0097350,GO:0097367,GO:0097458,GO:0097708,GO:0098542,GO:0098589,GO:0098657,GO:0098771,GO:0098772,GO:0098796,GO:0098797,GO:0098805,GO:0098857,GO:0099503,GO:0101002,GO:0120025,GO:0120035,GO:0120036,GO:0140097,GO:0140110,GO:0198738,GO:1901222,GO:1901224,GO:1901342,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1901652,GO:1901681,GO:1901698,GO:1901700,GO:1901701,GO:1902041,GO:1902042,GO:1902044,GO:1902105,GO:1902106,GO:1902107,GO:1902494,GO:1902531,GO:1902533,GO:1902679,GO:1902680,GO:1902739,GO:1902741,GO:1903034,GO:1903036,GO:1903037,GO:1903038,GO:1903039,GO:1903506,GO:1903507,GO:1903508,GO:1903530,GO:1903532,GO:1903555,GO:1903557,GO:1903670,GO:1903672,GO:1903706,GO:1903707,GO:1903708,GO:1903827,GO:1903828,GO:1904018,GO:1904813,GO:1904949,GO:1904950,GO:1904951,GO:1905114,GO:1905562,GO:1905564,GO:1990234,GO:1990774,GO:1990837,GO:2000026,GO:2000112,GO:2000113,GO:2000116,GO:2000142,GO:2000143,GO:2000145,GO:2000146,GO:2000147,GO:2000425,GO:2000426,GO:2000514,GO:2000515,GO:2000778,GO:2000819,GO:2001020,GO:2001022,GO:2001056,GO:2001141,GO:2001198,GO:2001200,GO:2001233,GO:2001234,GO:2001236,GO:2001237 |
| EggNOG free text desc. | protein heterodimerization activity |
| EggNOG OGs | COG5208@1,COG5648@1,KOG0381@2759,KOG1657@2759 |
| Ec32 ortholog description | DPB3 class protein with histone-like transcription factor (NF-YC subunit) and high mobility group domains |
| Ec32 ortholog | Ec-03_001170.1 |
| EC | 2.7.7.7 |
| COG Functional cat. | K |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | br01611,ko00000,ko00001,ko00002,ko01000,ko03000,ko03021,ko03032,ko03036,ko03400,ko04147 |
| Exons | 7 |
| Model size | 1352 |
| Cds size | 1209 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2445.6622.1 >prot_H-paniculata_contig2445.6622.1 ID=prot_H-paniculata_contig2445.6622.1|Name=mRNA_H-paniculata_contig2445.6622.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=403bp
MNKAMGLPVDSSVDLDYAPVAAGSHGLSMDKEAQRSPKRRRKSSDTVSDE QDIRPSTSVQDAPHLVGLEGRGKQQSMNGNVASVVSGELSSRGNEGPVDR EDCDADHMKEERHAGGEHGQEKNAQEVEGEARDEKRSGVGEKEDSAQEEI IADEDIGGNEEDQEEEEVDEEGDGGGGVDKTSSVDGAEVDIARARSAWMI FLSHNREKVRKENPGLAVGPMQKILSAMWKGLDEKESARYAKLAADDKAR MKKELADAGLTSLPVKKSTPVSIGGSSPTDLILPLARVRKTIRLDPTVGN ITKEGLQLVAKATEVFMEVMADRAWRVGRQTGRKSVKPCDLADYIFASPE LYWLRDEFRLERSSVKKSANKLETSGKASVGKKPTPPVATGAKAITSFFK KA* back to topmRNA from alignment at H-paniculata_contig2445:5487..19645- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2445.6622.1 ID=mRNA_H-paniculata_contig2445.6622.1|Name=mRNA_H-paniculata_contig2445.6622.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=14159bp|location=Sequence derived from alignment at H-paniculata_contig2445:5487..19645- (Halopteris paniculata Hal_grac_a_UBK monoicous) AGCATGGCCGTGCTAACCGCGCAGTCTCTATCAACGACGTATTTCTTCCC
TCACGACATCGAAGACTGATGAACAAAGCGATGGGACTTCCAGTAGATTC
TTCAGTGGACCTTGATTATGCGCCTGTAGCAGCAGGAAGCCACGGCTTGT
CTATGGACAAGGAGGCGCAGCGTTCTCCTAAACGCCGTCGAAAATCGAGT
GACACCGTCTCTGATGAGCAAGACATTCGTCCCAGTACTTCAGTACAGGA
TGCACCTCACCTCGTCGGGTTAGAGGGGCGAGGAAAACAGCAGTCTATGA
ACGGGAACGTAGCAAGCGTAGTGAGCGGAGAATTGTCATCACGGGGTAAT
GAGGGGCCGGTGGATAGGGAAGATTGTGATGCTGATCACATGAAAGAGGA
GAGGCACGCTGGTGGAGAGCACGGGCAGGGTGAGGTACTTGTAGATGAGT
ATGAACTGTCAGATAGATGCCTTTTCTGTTCCAAAACAGAAAAGGCGCCC
CCAAGTGAAAATGTTGTTTCTTGTTACAGCCAATGTACGAACACTAGCAG
TCAGTATGATCTGGATCTTATCATTGTAGCAGGGTAACGCAACACCGGAG
CGCACGAGGATATGTGGTTGCAGATACACGCAATAGATTTGGTCGACCCC
CTCCTGCTCTTTTCCCTAGTGATCTTGGCACACGCGCTATCGAGATAACC
ATACCAATTGTTTACCTCACCGACAATTTTTATGTATTTACCCCAGATAT
TCAGCTGATTTTTTTTTCAAACTAATTCCTTAACGAACTAACTGTTGTGT
TATTGACCCCTCAACATCGTGCAGAAGTTGTATAATTAGTCAAATATCAA
ATATCCAACAAAGATAATTCGCAAGGCGCACGCAGCAGCAGGGTTGATCC
GTGGTCGAAAGTCCACATCAAAAGATACATCACACGGATGTGAAAGCAGC
GGAAAAGGTTTTTACCTCAGCCTTCCGGGGGTTACCGTCGTTGGATCTCC
CAGGATAATGACACATGATTTTTTAGCCGGAGGAATCACGTGTGGCACAA
TAATAATCACCTGTTTTTCTTGTGGATTTTTGTGTCTTGTGGTCTATACA
GCGATGAACGTCCTGAACGATGAAGACACTTGTGACCGCTGTGTCCCTCA
CATGACCAGCGACGTCCCCAGCGGGGTTAGAGCTTTTGTAATGACACCTG
GATTGTGGGCGGCGTCTTTAAGCTTCATGGCACACGGCCGTGTATGATCC
GTACATATACCTGCTCAACATACAGGCTGAAGTTCCTTCGAAATGTACGT
GTGACAGCGCTCACATGATTACCCGGATAAGAAGCGAACCCTACAAATAG
TATAGATGGTCCTGTAATTTTTCTTGGAGAAACACAGAGTAGACGGTACA
GACGGTCCTGTGTTTTTTCTGGGAGACACCGAGAGGAGTTACAAGATTTG
GCATTGTTTTGAGTTCCACGACAGCAGCACATGATTGAAACTCGAGGCAC
AAACCACACCATGAGGGACTGGCTATACAGGCGCAGAAAACCTCACGCCA
CGATATTTAATTCAATACATCACTATTGCTCTCACGGCGCTGTCCCGACA
TTCGTAGACAGTATAGACAGTGCAAACAAAAAATGCAGAAGGATTTGTCT
TTCAGCCTCCCTTCCAGGTGTCGTTGTTGAAAGCATCAGTCGCAGCCACG
CTCGGGCACATACCATGCGCTACCGTCGTTCACTTTCTTCCTGTCGACAT
TACGCGTCTGTTGCGTCCACAAAAGACAACCAGACAAGAAATACAGCAGC
CCAGAAAACGCAGTGGCACTGTTGTCAAGTGGACAAACGTGCGCGTTTTT
GATTGGCCTGACCTTATGCTTTTCGTCTACAATTTGAGCCCTGCTGTCAC
GGTCCAGCACACGCCCCCCGCCCCTCCCCTCCCCTCCCCCCCCTCGATAA
AAACCATACCCCCGCTATTTTTGCAGCCGTTTCGCCGCGGAACTGTCACG
TGGCTTTACTGTTCTTTTTTGTGATGGGATATCGTACCGGTTAATAGTAC
GTGGTTAGTTCCACCGTGTTAAGGTATTTTTGTGGTGGGTGGATTTTTGG
ATGCTGTAAAGCTGTTGACCGAAAAATGTGCTGTTTCATCTGGTGTCATC
ACAGGTGTAAACGTGTCGTCGCCACGCAGAACTCAGCTTCGTGAACTCTA
GAGAGCACGAAATCACGTCGCAAAAGCACTTTGGGGCATGGGCAACGCCC
CCACGCCTGCGGTAAACGTCTGGCATAGCTTTCGAACCTCGCGCAGCAGC
GTGCGAACAGAGCACATGTCTGATGCTCACATACTTTTCAGGTTCGTGCC
AGGTTCGTGCCAAAAGAAAGACATGGGTTGTGTTCAAAAACCTGCATGAA
CTCAGCTGACAAAAGGTCATTGCCATCATGATCGACCAATAGATAATGTC
CTGACCGTTTCAGTGCCTGTATTGATTGGTTGATCCATGACTGCCGGCTC
CAGCGAGTCGTTTGCAAGCTCACGGTACCAATGGGTGCATCAGGCGCAAG
CCTCCTTCTGTAGCACGCGTTTTGATGGAGTTTGTTGGCTTGATCTCTCT
ACTAAACGCATCATGTGGGAATGTGTTGGTGTGTTTTGCTTTTAGTGGAA
AATAATCCTGGTCAAGCAAAAGAGATGGCGATCAAGTCTGCAGAAAGAAT
TGACATATATTGTTCTCTGTTGTACTTCATCATAATTTTGTGCACGTTGC
GTTCAGTCCCATCTTGGCCGAATGTTTGAGCACACCGCCGCATATCCCTT
TTGCGTGTCCCAAGCGTGACATTTGCGAAGGCTCGTTCGGAATGATGTCG
CTCTCCGCCTGCGCAGCGTGTTGCTAAATGGGCAAAGCCTACCCAAAAAA
TGCACTTCTCGGTCTCCGCCAGTCAAACACGCCTCATTTCTTTGTGTGCT
TTTTTTGTTTAACGTTTTATATGGAATGCAACACAAGTGTATTCACAAAT
CGCGCGGAATACTCTGCCGGCCTGCGATGTGGGGCGTCCAAATATGGCAT
ATGTTTGAATAATTCAAGAAAAAAATCCATGTTCACAAGAAGAGCAAGCC
TCGACTACTGTACTGCCTATTTGTTTGCCCTCCGACGTAGTTTAGAAGTT
GCATAAGACATCCGACAAAAGAGAAAGCGGAAGGCGAAATATTATTACTC
AGAAAACTCGAACCCCGTCCAGTCAACATCTGATAAATGAAAATTACCAT
TCAGCCTTCCAAGTATCAAGTGTTGTCTACTCGGGCGGTCGTACAAAGTA
ATTGTTGTCGGTATGGTTCTCATCTATTATTGTCGAACTGTCACCTGTAC
GTACTGCCATAGGTAGATGTAACATCCCCCGAGACATAGCATGGACAACA
GGGCAATCGATATTCGTATTCTGCATGACGAGTTCTCTTCTTTTCCAGTT
GTTCCTCCAGATTGCGTATTTTCAAGTTAGATTTTTGCACTTCGGGTCTC
AAGACACCTGACCATAATACTCTCCCAGCCAACACACGACATTTCTGTCC
ACGGCAATGCTTTCGAACAATGCCTCGTCTATGACCGATGACGGCGGGAG
CGTATTTCGACGAGGAGACCGATGCCTCAGGTGTCGACAGCGAGAACCGT
TCAGTCAGCACCCCCCCGGAAATCTCACCGATTTCATAGACAACCGTCTC
GACGACCGAATCAGTGTTGACTCCCGCCCGTCGTGGCAAGACTGAGACCC
GCGCAGCGAGAGTGGCCGGAGCGACAACGGCGACCCATTCAATGACCTCG
CCGTTATATAATATAGTAAAGATGCCGTGCGCAGGTACAAAAGGTAATTC
GCAATATTAGTAGTGCTGAGCCACAGTCACAGTAAAAATCTTAGTCCCTG
CCAGCTCAATGGCTACTTTTTATTCCGGATTTTTTCTGGTCATTTTCGCC
ATGAAAAATACGCACAATTTACAATTTCTTGGGTAAAACTGACCCCCTTT
CGCCTGTTTCTTGTGCGGAGCGAACGTTCCCAATCCCGCACATGTAATAC
GCAGGGTATGCTGCGCGCATGCGGAGGGTCCCACCACGATGATGGTATCC
ACTCACTACGTTTCATGCAGCACGCACCCGGTACATATTACACACAATAC
TGTTGGAGCTGCTGTCACCCATCTTGAATAACCGCCGACACAGCCAAGCT
AGATACGATGCCGAGGTGATAGTTGCAGCACTGCGGGCTTGCGGCAGCAG
CAGCTGGAGTCTCCGTTGCTGGGCAGCGATGTCGTCTGCTGCTGTAAGGC
TGCCCCATGCTGCCGTCGTTGTCATGGGGAACGATATTTTAAGCGATAAT
CTCGCCCACACCTTGAAGCACGCTTCACCGCGGCGAACGATTGCAGCGTG
TATATGTACTGTTTGACATGAAGGACGCGCCTAGATCAGAGCCCAGCCGC
AACAGTAGAACAGGCGACGTACTTGGACAGCTCATACTCCACCCTCCGAT
GTATTCATGACTGGTATTTTTCTGGGACCCACCCATGACTGGCGCGTTGA
ATATTTTCGAGTTCTTTTTCCCTTACAGAAATGACCCCCGCAAAAATCCT
CGACGAAAGCTCCGATAGGAAGTGGTCTAATAGACACTAGCCTTCGAGAA
ACGTGTTTTTCATGTTTTTAGTGAAGCACGTGCGCATTGTTTTCGTCCAC
TTGCGTGAGAAACGGAAAATAGAAGCCCTACTACGGAGGATCATAATCAA
TTACTCTAAATTTCAGTAATTCTTTCAGAGAAACACGTTTTTTTACACAA
AACATCACACTATCCCCTACACGTTGGCATACATGATCGTCTTCAACCAC
AGATATAAAAGTATTTGAGTGATGCTGAGAATATACGCTCTCTCATTTTG
CCCGCCTTCACTTCTACAACTCTTGCAACGCGCACTGCAAGCGCGTGCAT
ACAGGCACTACCATACGTTTTTTTCGGTGTCTTGCAATTTTTTCCCGGCG
ATTTTTTAGAACCAAAACTTAAAACCGATTCCTGTAAGAACTTTGGAACA
TGCCATGAATTGTTATCAATTCATTTTTTTTTAATTCACTGCCATTGACG
AGATATGAACACTCGAAGACGGCGTGGTACGCTCTGGGTGCACAACGGGC
ATTGAATGCACGGCGGACAGTTCTACAGCAGACGGTGTGGCGTTGTTGTG
TCCTCTTACGCGCGGTGGGCTTCTATTTTGTATAGCAGAGTACTGCGGTG
ACATCCCTTTATTGCATCGTGCTGCAGCGGTGCCGTGTGCTACAGTATAC
TTCATTTGTAGTACTTTTTATTACTGTACTGTGCACCACGGTCGGCACGA
GCGGTATAGCTGTCTGTACCGGTCGGCATGCAACGTGTGTCTGTGTACGG
CAGCGTGCTTCGTTGCGCTGTCGTAGTCCGTGCTGCCTTGTGCTGTTTGT
ACGGCTCTCTGACATCTGTTTCTTGCGGCGCTACGCGACTACGTGGTGGA
CTTGAGGTGCCGCTGCTCCCGATTAACGACATGCCTTTCACAAGCAAGAG
AAGAACAAGCGAGAAGAAAACCCACGTCGACGTGATATCACGAGGGGGGA
GGTAAAAAAAAACAGCACATCCCCGTGGAAACGGCTTTTTGATGATGGAT
GCGCTGCGCGAACAAAACCTGACCCTCGAATCCCGAAACATCACCATTAT
GACCACTCTTCGGAAACAAGACGAGAGGGAAGCGCAGCAAAAGGCTCTTG
ACGAACGGGAAAAGAAGATCGCTGCTTTGGAGAAGGAGCTCATCGAAAAG
GTAGAGGCGAAGATGCGCCCGCGAACCATGGGTCCAAAACAGGGAGTACA
GGCAGATGCAGCTGAGCAGTTGAAGTATTTAGGACCTAGGCTGGGCACGC
TTCTCGCAAAGACCAGTCACGAGCGATCGATCCTGCAGACGGGGGGAAAA
ATGTACTTAACTGCTCCTACCATGGCTATACATCTTCATCTTATTGCCAA
TCACCACCGCGTTGGCTCAAGAAACATGTACGATATTCGTTTTTTTGGTG
GAAAGAGAAAGGATCTGTTGACTTCGTCGGGAAGCGGGCGCGGTATCATG
AAAACAACAAATTACGGGCGACGGGTACTGGACGACTCGCAGGCCGCAAA
AGTTCGTACATTCATCAGCAGCAAGCACGATGCTGGGCAGCAGATGTTTC
GACGCACGGTGGGAGGGAGAGTTTATTGAGGAAGAGTGCGGCCACAAGAT
GTCAAACCGTACAGTTAAGGGGATGCTTAATGGGTTTGGCGACAGATGCC
GTCGGGGGAGGATCAAGATCCCAAGCCCAACGCCTGAGAGGTTGGCTCAC
ATTCGGCGTTTCCTCGTCGAATTTGACGCTCCAATCAAGGAGGACAGAGG
AGATGCCGTGATCATTTATATGGACAAGAGCTTTGTACACCAACTGCACA
GTTCAGCGTATAATATGTTTTCGTAGACGAGGATAGCGTGGAGCAGCATG
GGATAGGACGTACCTCGGGGAAACGCTTGCGGATGATCATGGGGCTCACG
ATCACGAAATGCGGTCCGCTGGTTGAGAAAGATGACGAGGACGACAGCGA
GAAAGGATTCCCGATTTGAGAAGGGGTGACGTAAATGCGCTACAAAGGGT
ACACGGAACTATCGAGACGATGAAGGGTTCACCATAGTTGACAAAAGCAT
CGCAGAGTATCTTTGGCAAGCCAAGCTGACAAAGGGCGATTATCACGCAG
TCATGAATAACATGATGTTTATGACGTGGCTCGAGCACCGCCTTGAGCCT
GGTTTGGACAATGCGCCGTATCACCACGGCTACGATATCGAAGTGAGGCA
GCCGGAGTCTAGCAGCAACATGACCAACACCGAAGTTTTTCACAAGTACG
GAGCTAAAACAGTTACTGTCATCCACGACACAGAGGACGCCATGGGACGC
AAAAAAATATAGCTTCAAATTCGAAGTTCCCCAGGAGCTCGGGTCTTCGT
TTTCCAACGGCAAGTCGAAGAATGGCGTTAACATGGCCGAGGCGGCGTTG
GCTACTCGAGGGTACCGGCAGGTTCATCATCCCGAACTGCTGATTGGGCG
TATATAAAATTTCATGAACAAGCACGGGTGGCAGCTAATTTGGACATCGC
TGTACACGTCCAAATTGCGGCTAATTGAGCTGTTCTGGCAGCGTGGCAAG
CAGTATGTCAGCTTCCAGTACGACACGAAGCAGAACATGCAGCAGGTGTG
GGAGCAGATTCACTTGGGTTGGTATGGGGGCAAGGACTGGAAAGGACAAG
AGGAGGTGTGAAATTCAGCCATCTGCGCTAACTCGGTTGAAAATGCTATC
AAAGAGATGGATCGGTGGATAGAAGCCGACAATATTCTCGGGTGTAGGAT
CGGTTCGCTTATCGTTCCCGACTCTTCCGACAAGAATAGTGTTCCTAGTA
AAGGCAGAGTTCTTCCGGAGGATGGTTTGGGGGCGGGGATGCAAGTGGAC
GACAAAGCCAATTTCGATGATACGGGGGGCGAGGAAAACGAAGACTGTGA
CGCTGAGATCGAGCGTTGAACGGAGAGCATCGTCAAATTAACATCGAAAC
CAACGTATGACCTGTTGTTCGGGCATTTTTTTTTTTTTTTTCGATACGTT
TGTCGTTCGGGCACGCAGTTCAAGCATGGGGCGGTTGCATAGCGGGGACA
GATCGGTTTATTCACTTTTGCGTTCTTCGCTTTTAGTTCATGCCGCGTTT
GTTCGTCAAAAGTTTGATTGCAGGTATTTGTCGCACGGGACTGCTGCATA
GCATGCGGCGTGGGCGTTCATGAATAATTTTTTTATTGCGGTGGGGACGA
GGCCGGGGGACATCTTGTAAATTCAAGAACAACTTTGCAGAGTATGTTTT
CACTTTGGACTGCCCATGTTTGAGATCCTCTTGTGTTTTGACGCAGGTTT
TACACCTGCTGTACAGTGTAAATTGCTCGCCCAACAAAAGTCGAAGGAGT
TTCTCACGGGAATCGCGGCCGGCCAACGGTGACTTGCGACGTGGGTAAAA
TAGCCATGTGGAGCGTCGCTGTCTTAGCGTTATCCTTGCGTGTCAATGGT
TCCGAGTTTTGCTCTAATCTGGTCATATTTCAAGTCATGCAGTGCCTAAT
TTAGCAACTCGAATTCCTCGGCCGTTTTGCACAAGCTTCCGCCACTCAAA
TATCCACCGGACTCAACTTGACACCCCTCCCTCCCCCCGCCGAATGGCTG
TCAACACGGGGGTAAGACATCAACCTCGAGGCGTTCGACTGGGCATTACT
CGACCAAATGTGTCCGAATCTCATTGTCCTTTTGCACGATGTTTGTATGA
AAATTTAAGTTTGTTCGCGCTATATTTTGTGGAATGAGTTCCGAAAATGA
TGGAAGACATGACCCTCAAAGCTTACTGAGGTAAAGTTTTTCCAGGATGT
GACAAACCTCTATAAATGTACAGTATTAGTCATATAATTGTTTTTCGTGT
TTTCCCCATTGCATTTGTCTTTTCCCTATAACCAATTTGCGTTCCCAGAT
ATGAAGGGAAATCATTTATTATGGCCCTCCGCAATAGAAATAGCAACGGG
ACTGAGCTCCAAAGCTGCGCTTTCACACTCCAAGTTGCTTCGATCTGTTT
TTCGAGGATTTCAAACCATGGTAACTTTGTATAGAGTGTTCATAATCCTC
TTTTCCCCTCAAAATATTTCTGATTCCAATCGTGCGCGCCGTTTGAGCCC
ACCAGCTTTAGGAACGGAAACCACCCGCCCCAGACACCAGACCATAAATG
AGCTCTAGAGCAGAAAATTCTGAGCAATTTCCATGTGTCTACTGCACATC
ATATCAACTGCATTATAACCCCGAAGACGCGTAGGCCGAAGAATTTGAAA
TTTGCAAAAAGTGTTCCAGGTCTGAAATCCTCCCGAAAAAATAGAAGAAA
TGAAATGTTTTTTAAAATGTTATTTGTACTTGATTTTAATGTGGATTCGC
GAGGGGTATCGTGTAAAGACACAGCGCGCAATTTGAACACGTGAACATTG
ATGTTCTCGGTTGTTCTTGAACAAATATATACACATCGTGCAGATCTAGC
ACACCATGGGCGAAAATAACTCCCAAGATAACGCCTGAGAATATACAAAA
ACGAGGATACGGAAGATATCGGCGATTTCGTCCCTGCATCATGAGATTTT
ATTCTTTTCTTTTTTTAATCGAATCATAGCACCGGTGGCCAGTGGGGTAT
CTTGCGTTGAGTTGCCAATCGTGTGTTGATTTTTGATACTGATAAGAGGG
TTGGCAAGGTTTCATCACGTTGTGTGGAGTTTATCCAAGCCGTCAGAAAA
CCTCAAGCACCTTCTACACAAACCCTGAATAACCTCGCGAACGAAAAACT
CCCCAAAAATACACCCGTTTACCTTTCCGGGGAAGAGAAAAATGCCCAAG
AGGTAGAAGGAGAAGCGCGGGACGAGAAGAGATCTGGAGTGGGGGAAAAA
GAGGACAGTGCCCAAGAAGAAATAATAGCAGATGAGGACATTGGAGGCAA
TGAAGAAGACCAAGAGGAGGAAGAGGTGGATGAGGAAGGAGACGGGGGGG
GAGGGGTGGACAAAACCTCTTCGGTGGATGGGGCCGAGGTTGACATAGCG
CGAGCACGGTCGGCGTGGATGATTTTCCTTTCGCACAACCGGGAGAAGGT
GAAAGTTTTTGGCCTCCAACGTATCCTTTTGAAATTGATACTATACAGAT
GATGACGTTCCTCTCGAAACACTTACCATCCTATATCCGAGTGTTTTTTT
TTTTCAACGTGTCACGTGACACGGAACAGTTTGTTGCCGCTGTAATAGCT
GTGGCCTACATGCTAGTGTAAAGAGAGAAAACGGTGCCACACTTCAGAGA
TAGAACAGTCTTGAAAATATCGGCATTTGCACAGATTACGAGCCAGTATT
CTCTCCTCTCCGTTGTACTTTCTAATTTTCATGTTATAAAATCTGCTCAT
ATTATTCGAAAATCATGCGCATAAGCGACTGTTGTTTTTTGGCTGTGATA
TCGCATCATGGTGTAGTCACTCACGGAGTGAATTGCCACCATCCTGCGGT
GACAGCTTTTGACCTACACACACAACCAACAATCCAATCACGACGCGAGA
CAGCTACATTTTGGGCTCATGGTAGCATGGATGTGTGCCTCCCTCGGTAA
CGTGCGAACGACTCAGTTGAACGTTGCTCTTGTGCACAGGCGCGTCAGGC
CATGGTAATTTCAGCCGAGATATTGCATTTCGCAGCCGAAAATGCACGCT
ACGATATTGTGCAGTGACATCTTTCTAAGAAGGGAAGTTTTTTTTTTTTC
ACCAGGGCACGAGCAGGAGCATCGTTGGAGTACAAACCCTTATCTACCCA
ATCTGCTAACGAAACTCTTAGATGACAAATTCACATATGCTTCTGCTCTG
GCGGTCACCCAGACCCACCTACCTCCGTTATTCTGTTACCCGCGTCGAAA
AATGTACAGTGCTCTGGTTGTTCCCTCTCGTGGTGCGGAACACCCATGAT
CCTCGTTACAACATTTCAACATTGTATCTTTGTTTCTGACGATTCGTGGC
TTTTATGCCATACTTTTGTGGTTCTTGGACTCCTGATCGCAATCGAAAAG
CAGTAGTAGTGACAGCTGTGCTTATCCACAGGCGCATGCTATTTGTATCG
CCCAGCATGTTGAGTTTTGCGCTGCACTGATCGACTCGTAGGTTGTACGA
CGGTTGCTCCCAAGCGCCTGGTCGACAACGAATCGCTGCGCGTACCCCAT
TCGAGTAAACCCCCAAAAGTCCTAAAGCGCCACACAACGATATTCGACGA
TTGAAAAGTCTTTTTTTCCAACGTGATTTTTACGTTTACCTACAGACACC
CGTCAACAACAGAAATCAATATTGCTCGATGATGAGTATGCTTTACATCG
GTCGTGGTGTTACCCAGGTACGTAAGGAGAATCCGGGCCTGGCCGTAGGA
CCGATGCAGAAGATCCTGAGCGCGATGTGGAAGGGCCTCGATGAGAAAGA
GTCCGCCCGCTACGCTAAGGTGTGTATTTTGAGTGTAGCTCCCCTGCAAT
ATACACCCCGGTTCCTGCCACCTCTGTATAGACTGTTCTTACAACAAGGT
GATCGCCAATAAACCTCACGCTTCGCGTCACTCAAAAATATTTTCAAGAG
CACCCCGCCTTTGTACTTTCTCTGTTTTTTGTACAACACCATCGGGGGGA
AAGCTGGAGGTACGTCCAAAATGACTGACGATGCCACTAAATATTTAATT
CGATTCGCATTGCTTTCGCTAAGATCGGCGCACTCTGAACCATGGCCCGT
GTGTCTTCTCCCCGGGGTGGCGTTTTTGCGATAGACAGCCATGGTAAGCC
AGATGCAGAATACATCGCTAGCGTTGTCGAGAAGTGAACAACGGAACGTT
ACAGTTTGTTTCGTGGTGTATCGCTTAATGTGTTCACAGAGCAGAGACGG
TGAATATTGTGGGAATTTGGCTGAAAGTGTGCGTGCGTGTGTGTGTATGT
GTGTGTGTGTGTGTGTGTGTATGTGATGCTGCCAAAGTAGTGCGCATGTG
ACACGATCACAAGCAAAGAGTCAAGTGCGCGCAGAGCGACGCTGGAGCTT
CGTGGAAAGCTCCCTCGGTACTCACGAAAAGGCTAACTCGTGTGAGGCAC
AGAATTTACGGTGAAGGTCGCAAATGTTTCTTGCCTAGTATGGTTACATC
CGTTGTACTGAGGCGTTGAATTGGTACTGAATAGTATCAAATGAGCTGTA
TAAAAAGTTACTGATACTTGTATCTAACGACGTCTCTTATCAAAACATCT
ACCCAGCTGACTCTTCAGCTGACGCTGGCATGAATCGAACAATAGCCATT
GTTTAACATTCTTCTTGAACCACAGCCCCAATGTGTGGTTGTTCTACTTG
CGTGGTCCCGCAACTAGAATACACATTGCTCATAAACAGTCGTTCATACG
AAAATATCCCAAATACTTGAATCCTAATCCGCTTCCGAGGATCCCTATGC
CTTAAAGGTAGTTTCTTGATCTTGTGATTCCACCGCGCGTAGCTTGTCGC
TACTTGTTCATTGTCCAGTCGTCCCTTCTCAATTGTTCAGCGTTATTCTG
ACTTTCTTCTGTAGTTGGTACTTTACGTATCTACCGATTGTCTGTCTGCA
CGTACTTTCAAGAGTGAAGAGAACCAATATCCTCCGTGTGCATATGGTTT
TATTTCATCCACAGTTGGCGGCAGATGATAAGGCACGGATGAAGAAAGAG
CTGGCAGACGCTGGCCTGACCTCGCTGCCTGTCAAGAAAAGGCAAGACCC
CAACAGTCATATACCTAGCCAAGTTGATGCGTGAGCCCAGAGTGTAAGAC
CGGGAAAACCCCGAGGGCGTCCTGCGGTATGACTACCTTTGGTAGGGTTC
ATTTTCCTCCTCTGGCGTCGTGATTTGTGCGCCAATCAACCAACATTCCC
GAGCACCGCTAGTGTAAGGGCAGATGACGTGTGTTGAGTGCATGTTGAGC
AAAACATGCAGGTACCGCAATAGCTAAACGTCTGACTCGCGTAATATTGT
GAGCTGACTTCGCAGTATTGATTTCCGCATCGATGCCATTCAACTTTTTT
CGTACATTACCGCAGTATAATTGCCCTGTCAGCATGCAGCCGGTTAACGA
AACACATCCATTCCCTCCCCTCTTTACTGCTACATTCCATATTGCGAACA
ACATCCACGTGCCATTTTGAAGCACCCCTGTGTCCATAGGTGGGAGCAGT
CCGACGGACCTCATCTTGCCGCTGGCCCGAGTTCGCAAGACGATTCGGCT
TGATCCCACCGTGGGGAATATTACGAAAGAAGGACTGCAGCTCGTGGCGA
AGGCGACCGAAGTTTTCATGGAGGTCATGGCAGACAGAGCTTGGAGGGTT
GGAAGACAGGTGCGCCGCACTGTTGCTCCTTCTTTTGGTACGTCAGTTCC
AGCTACAGCCTACATTATAGAATGAGACACGCAATTTATCGAGGCAATCA
ACTTGTCGATTGTAGCGACCTCACTTTTACCCAAACCTCATCCACCCGTC
CCCCCCCTTCCCCGTTCCGTTCTTCGCATTCTCAACCATGTGTGATGCGC
CCCGTTACTACCTCGAAGACGGGTCGCAAGTCTGTGAAACCTTGCGATTT
GGCCGATTATATCTTCGCTTCGCCGGAGCTGTATTGGCTACGAGATGAGT
TCCGCTTGGAAAGGAGGTACAGCCGATTCCCTCCTCGCTTTGCTATAGAT
GGTTGTAAGCTATTCTGATACGTTACAGGCAAGAAGTGTTCGGAGGAACA
GCCTGAATAGAAATGTCTACTATTTAGACGACGATTAGTCTGGGTTCACC
ATGGTTGGTAGCGGTTTGTATTATCCTTTCAGTCTCTTGAGATCTCGAGG
CAATGATTTTGATACCCAGCGTATGTCCAGCCTGTATCCATGAGACGAAA
ACAATACAGGCAGACTCATTCAGCGCTTGAAACTCGTCATATGTTTGCTG
TAGGTGCCGCCATGATGGTGGCGTTCGGTTCTAGTCAGCAGGTTGATGAA
AACCATGTGCGAGATATAAAGATTTCACGGTGCCTTGGAAGCACTACTAT
GCCGATCTAGATATCCCAGTGTCTCTGATTGCAACTCGCTGCCATTGCCT
TCACGTATGGGCGTAAAAAGTAAAAAATTGGTGAAGGTGTACTTGGACAG
TTTTTGTCGTTAATTTGGAATACTTGTATCTCAAAGCAGGGAGAGAGAGG
AGAGGGGGGCTCAATTGTCGCATGTACACCCTACCGTCTTCACCATCAAT
CAGGCTTTTCTCTACAGTATCGAAAGCCGCGTGCCTCTGCGCACCCTTTT
TCAATTCTTGGCAATTTCCGCTCGCCCCCTTGGTGTCAAATACACTTGCA
CTTCACTGCGCAGTTCTGTGAAGAAAAGCGCGAACAAGCTGGAAACTAGT
GGAAAAGCGAGCGTTGGGAAGAAGCCCACACCGCCGGTGGCCACGGGCGC
CAAGGCGATCACTTCTTTCTTCAAGAAGGCGTGAGACACTAAACGCCACG
TATTAATTGGCGCAGTCGTACGCGCTTAACACAGGCATTCAGCGAGCGCG
TACAGCGCG back to topCoding sequence (CDS) from alignment at H-paniculata_contig2445:5487..19645- >mRNA_H-paniculata_contig2445.6622.1 ID=mRNA_H-paniculata_contig2445.6622.1|Name=mRNA_H-paniculata_contig2445.6622.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2418bp|location=Sequence derived from alignment at H-paniculata_contig2445:5487..19645- (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGAACAAAGCGATGGGACTTCCAGTAGATTCTTCAGTGGACCTTGATTA TGCGCCTGTAGCAGCAGGAAGCCACGGCTTGTCTATGGACAAGGAGGCGC AGCGTTCTCCTAAACGCCGTCGAAAATCGAGTGACACCGTCTCTGATGAG CAAGACATTCGTCCCAGTACTTCAGTACAGGATGCACCTCACCTCGTCGG GTTAGAGGGGCGAGGAAAACAGCAGTCTATGAACGGGAACGTAGCAAGCG TAGTGAGCGGAGAATTGTCATCACGGGGTAATGAGGGGCCGGTGGATAGG GAAGATTGTGATGCTGATCACATGAAAGAGGAGAGGCACGCTGGTGGAGA GCACGGGCAGGATGAACAAAGCGATGGGACTTCCAGTAGATTCTTCAGTG GACCTTGATTATGCGCCTGTAGCAGCAGGAAGCCACGGCTTGTCTATGGA CAAGGAGGCGCAGCGTTCTCCTAAACGCCGTCGAAAATCGAGTGACACCG TCTCTGATGAGCAAGACATTCGTCCCAGTACTTCAGTACAGGATGCACCT CACCTCGTCGGGTTAGAGGGGCGAGGAAAACAGCAGTCTATGAACGGGAA CGTAGCAAGCGTAGTGAGCGGAGAATTGTCATCACGGGGTAATGAGGGGC CGGTGGATAGGGAAGATTGTGATGCTGATCACATGAAAGAGGAGAGGCAC GCTGGTGGAGAGCACGGGCAGGAGAAAAATGCCCAAGAGGTAGAAGGAGA AGCGCGGGACGAGAAGAGATCTGGAGTGGGGGAAAAAGAGGACAGTGCCC AAGAAGAAATAATAGCAGATGAGGACATTGGAGGCAATGAAGAAGACCAA GAGGAGGAAGAGGTGGATGAGGAAGGAGACGGGGGGGGAGGGGTGGACAA AACCTCTTCGGTGGATGGGGCCGAGGTTGACATAGCGCGAGCACGGTCGG CGTGGATGATTTTCCTTTCGCACAACCGGGAGAAGAGAAAAATGCCCAAG AGGTAGAAGGAGAAGCGCGGGACGAGAAGAGATCTGGAGTGGGGGAAAAA GAGGACAGTGCCCAAGAAGAAATAATAGCAGATGAGGACATTGGAGGCAA TGAAGAAGACCAAGAGGAGGAAGAGGTGGATGAGGAAGGAGACGGGGGGG GAGGGGTGGACAAAACCTCTTCGGTGGATGGGGCCGAGGTTGACATAGCG CGAGCACGGTCGGCGTGGATGATTTTCCTTTCGCACAACCGGGAGAAGGT ACGTAAGGAGAATCCGGGCCTGGCCGTAGGACCGATGCAGAAGATCCTGA GCGCGATGTGGAAGGGCCTCGATGAGAAAGAGTCCGCCCGCTACGCTAAG GTACGTAAGGAGAATCCGGGCCTGGCCGTAGGACCGATGCAGAAGATCCT GAGCGCGATGTGGAAGGGCCTCGATGAGAAAGAGTCCGCCCGCTACGCTA AGTTGGCGGCAGATGATAAGGCACGGATGAAGAAAGAGCTGGCAGACGCT GGCCTGACCTCGCTGCCTGTCAAGAAAAGTTGGCGGCAGATGATAAGGCA CGGATGAAGAAAGAGCTGGCAGACGCTGGCCTGACCTCGCTGCCTGTCAA GAAAAGCACCCCTGTGTCCATAGGTGGGAGCAGTCCGACGGACCTCATCT TGCCGCTGGCCCGAGTTCGCAAGACGATTCGGCTTGATCCCACCGTGGGG AATATTACGAAAGAAGGACTGCAGCTCGTGGCGAAGGCGACCGAAGTTTT CATGGAGGTCATGGCAGACAGAGCTTGGAGGGTTGGAAGACAGCACCCCT GTGTCCATAGGTGGGAGCAGTCCGACGGACCTCATCTTGCCGCTGGCCCG AGTTCGCAAGACGATTCGGCTTGATCCCACCGTGGGGAATATTACGAAAG AAGGACTGCAGCTCGTGGCGAAGGCGACCGAAGTTTTCATGGAGGTCATG GCAGACAGAGCTTGGAGGGTTGGAAGACAGACGGGTCGCAAGTCTGTGAA ACCTTGCGATTTGGCCGATTATATCTTCGCTTCGCCGGAGCTGTATTGGC TACGAGATGAGTTCCGCTTGGAAAGGAGACGGGTCGCAAGTCTGTGAAAC CTTGCGATTTGGCCGATTATATCTTCGCTTCGCCGGAGCTGTATTGGCTA CGAGATGAGTTCCGCTTGGAAAGGAGTTCTGTGAAGAAAAGCGCGAACAA GCTGGAAACTAGTGGAAAAGCGAGCGTTGGGAAGAAGCCCACACCGCCGG TGGCCACGGGCGCCAAGGCGATCACTTCTTTCTTCAAGAAGGCGTGATTC TGTGAAGAAAAGCGCGAACAAGCTGGAAACTAGTGGAAAAGCGAGCGTTG GGAAGAAGCCCACACCGCCGGTGGCCACGGGCGCCAAGGCGATCACTTCT TTCTTCAAGAAGGCGTGA back to top
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