mRNA_H-paniculata_contig11013.662.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11013.662.1 vs. uniprot
Match: A0A6H5JP79_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JP79_9PHAE) HSP 1 Score: 215 bits (548), Expect = 6.000e-64 Identity = 103/136 (75.74%), Postives = 116/136 (85.29%), Query Frame = 1 Query: 1 QGNHHSLPEPLLFNAQYLIRLQFPLGYNFMRILRYYGTNSTEVPGLQIPAFQKLMNDMNTVPVLGTSFNVYAPMVLVVLCLFTFCKGYARAQRLVGLEHEDLVSIEDPDGKARLDEGRGLIERGKRHAQVIKLRQK 408 QG HH+LP PLLFNAQYLIRLQFPLGYNFMR+LRYYGT S VP L +PAFQKLMNDM+TVPVLGT F VYAP+VLVVLC FT+ KGYAR RLVGLEH DLVS++DP G AR+DEGR L+ERGKR AQV+ R++ Sbjct: 464 QGGHHTLPGPLLFNAQYLIRLQFPLGYNFMRMLRYYGTRSASVPALSLPAFQKLMNDMSTVPVLGTGFTVYAPLVLVVLCAFTYYKGYARVLRLVGLEHVDLVSMDDPGGNARVDEGRELVERGKRQAQVLAARRR 599
BLAST of mRNA_H-paniculata_contig11013.662.1 vs. uniprot
Match: A0A835ZCR5_9STRA (LMBR1-like membrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCR5_9STRA) HSP 1 Score: 158 bits (399), Expect = 6.220e-43 Identity = 78/136 (57.35%), Postives = 100/136 (73.53%), Query Frame = 1 Query: 4 GNHHSLPEPLLFNAQYLIRLQFPLGYNFMRILRYYGTNSTEVPGLQIPAFQKLMNDMNTVPVLGTSFNVYAPMVLVVLCLFTFCKGYARAQRLVGLEHEDLVSIEDPDGKARLDEGRGLIERGKRHAQVIKLRQKV 411 G H SLP L+FNAQYL+RLQFPLGYNF+ +L Y E LQ AF KLM++M+ VP+LGT FN+YAP+++VVLCLFT C GYAR R+VG+EHEDL D +G+ R+DEG+ LIERGKR A + + R++ Sbjct: 414 GPHQSLPGQLMFNAQYLVRLQFPLGYNFLTLLHY------EKGMLQHIAFNKLMSNMSVVPLLGTDFNIYAPLIMVVLCLFTACHGYARLLRMVGIEHEDLQCATDKEGQERMDEGKSLIERGKRQAALRESRRQA 543
BLAST of mRNA_H-paniculata_contig11013.662.1 vs. uniprot
Match: A0A835Z6T2_9STRA (LMBR1-like membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6T2_9STRA) HSP 1 Score: 128 bits (321), Expect = 7.700e-32 Identity = 66/119 (55.46%), Postives = 83/119 (69.75%), Query Frame = 1 Query: 4 GNHHSLPEPLLFNAQYLIRLQFPLGYNFMRILRYYGTNSTEVPGLQIPAFQKLMNDMNTVPVLGTSFNVYAPMVLVVLCLFTFCKGYARAQRLVGLEHEDLVSIEDPDGKARLDEGRGL 360 G H SLP L+ NAQYL+RLQFPLGYNF+ +L E LQ AF KLM++M VP+LGT FN+YAP+++V+LCLFT C+GYAR RLVG+EHEDL + D DG+A + L Sbjct: 475 GPHQSLPRQLIMNAQYLVRLQFPLGYNFVTLL------GPEGGALQRIAFNKLMSNMAVVPLLGTDFNIYAPLLMVLLCLFTACRGYARLLRLVGIEHEDLHTA-DVDGQASMRRSNAL 586
BLAST of mRNA_H-paniculata_contig11013.662.1 vs. uniprot
Match: A0A7R9Z808_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z808_9STRA) HSP 1 Score: 115 bits (287), Expect = 3.850e-29 Identity = 63/126 (50.00%), Postives = 86/126 (68.25%), Query Frame = 1 Query: 1 QGNHHSLPEPLLFNAQYLIRLQFPLGYNFMRILRYYGTNSTEVPGLQIPAFQKLMNDMNTVPVLGTSFNVYAPMVLVVLCLFTFCKGYARAQRLVGLEHEDLVSIEDP---DGKARLDEGRGLIER 369 +G SL L+FNAQYL+RLQFPLGYN++ +L+Y T+ST AF ++M+DM TVP GTSF+VYAP++++ LC FT C GYAR L+G+EHED + + D DGK ++EG L+ R Sbjct: 64 RGYKQSLGVALVFNAQYLVRLQFPLGYNYLLMLKY-DTSSTTC------AFSRVMSDMETVPFFGTSFSVYAPLLILALCGFTLCNGYARLLSLLGVEHEDAILMGDKETLDGK--VNEGIQLLRR 180
BLAST of mRNA_H-paniculata_contig11013.662.1 vs. uniprot
Match: A0A7S2VYF6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VYF6_9STRA) HSP 1 Score: 114 bits (285), Expect = 6.800e-29 Identity = 64/135 (47.41%), Postives = 91/135 (67.41%), Query Frame = 1 Query: 1 QGNHHSLPEPLLFNAQYLIRLQFPLGYNFMRILRYYGTNSTEVPGLQIPAFQKLMNDMNTVPVLGTSFNVYAPMVLVVLCLFTFCKGYARAQRLVGLEHEDLVSIEDPDG-KARLDEGRGLIERGKRHAQVIKLR 402 +G+ S LLF+AQYL+RLQFPLGYN++ +L+Y T+ST AF LM++M+TVP LGTSF+VYAP++++ LC FT C GY R L+G EHED + + D D ++ + EG L+ +RHA+ I+ R Sbjct: 85 RGHRQSHGVALLFSAQYLVRLQFPLGYNYLLMLKY-DTSSTTC------AFSNLMSNMSTVPFLGTSFSVYAPLLILCLCGFTLCNGYPRLVALLGFEHEDGILMGDRDALESNVSEGITLL---RRHAERIECR 209
BLAST of mRNA_H-paniculata_contig11013.662.1 vs. uniprot
Match: A0A7S0BUX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BUX5_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.150e-28 Identity = 63/129 (48.84%), Postives = 85/129 (65.89%), Query Frame = 1 Query: 1 QGNHHSLPEPLLFNAQYLIRLQFPLGYNFMRILRYYGTNSTEVPGLQIPAFQKLMNDMNTVPVLGTSFNVYAPMVLVVLCLFTFCKGYARAQRLVGLEHEDLVSIEDPDGKAR-LDEGRGLIERGKRHA 384 +G S LLFNAQYLIR+QFPLGYN++ +L+Y T ST AF ++M+DM+TVP GT+F+VYAP++++ L FT GYAR L+G+EHED + + D + R + EG LIER KR A Sbjct: 34 RGYKQSPGVALLFNAQYLIRMQFPLGYNYLLMLKY-DTESTNC------AFAQVMSDMSTVPFFGTNFSVYAPLLIIALTCFTLLNGYARFLSLLGIEHEDAILLGDTETLDRQVKEGMSLIERRKRDA 155
BLAST of mRNA_H-paniculata_contig11013.662.1 vs. uniprot
Match: W7TPT9_9STRA (LMBR1-like membrane protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPT9_9STRA) HSP 1 Score: 115 bits (288), Expect = 3.470e-27 Identity = 63/123 (51.22%), Postives = 81/123 (65.85%), Query Frame = 1 Query: 1 QGNHHSLPEPLLFNAQYLIRLQFPLGYNFMRILRYYGTNSTEVPGLQIPAFQKLMNDMNTVPVLGTSFNVYAPMVLVVLCLFTFCKGYARAQRLVGLEHEDLVSIEDPDGKARLDEGRGLIER 369 QG H SL PLL NAQYLIRLQFPL YNF+ +LR + T AF+ LM++M VP+LG F+VYAP+++VVL FT+ +GYAR RLVG HEDL+S E+ + + +GR L R Sbjct: 497 QGPHQSLAGPLLVNAQYLIRLQFPLAYNFLLMLRSPSSKQT--------AFRHLMSNMAVVPLLGRGFSVYAPLMMVVLAAFTYFRGYARLLRLVGAYHEDLISGEEQE--EMIQQGRSLARR 609
BLAST of mRNA_H-paniculata_contig11013.662.1 vs. uniprot
Match: A0A7S2XKF6_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XKF6_9STRA) HSP 1 Score: 114 bits (286), Expect = 5.810e-27 Identity = 57/124 (45.97%), Postives = 87/124 (70.16%), Query Frame = 1 Query: 1 QGNHHSLPEPLLFNAQYLIRLQFPLGYNFMRILRYYGTNSTEVPGLQIPAFQKLMNDMNTVPVLGTSFNVYAPMVLVVLCLFTFCKGYARAQRLVGLEHEDLVSIEDPDG-KARLDEGRGLIER 369 +G++ S+ L+FNAQYL+RLQFPLGYN++ +L+Y T+ST AF +M+DM+TVP GTSF+VYAP++++ LC FT C GY R ++G+EHED + + D + + +++EG L+ R Sbjct: 461 RGHNQSIGVALVFNAQYLVRLQFPLGYNYLLMLKY-DTSSTNC------AFVHVMSDMSTVPFFGTSFSVYAPLMIIALCCFTLCNGYPRLLAVLGIEHEDAILMGDKETLEGKVNEGITLLRR 577
BLAST of mRNA_H-paniculata_contig11013.662.1 vs. uniprot
Match: A0A7S2A7R7_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A7R7_TRICV) HSP 1 Score: 112 bits (279), Expect = 1.510e-26 Identity = 60/130 (46.15%), Postives = 86/130 (66.15%), Query Frame = 1 Query: 1 QGNHHSLPEPLLFNAQYLIRLQFPLGYNFMRILRYYGTNSTEVPGLQIPAFQKLMNDMNTVPVLGTSFNVYAPMVLVVLCLFTFCKGYARAQRLVGLEHEDLVSIEDPDG-KARLDEGRGLIERGKRHAQ 387 +G S L+FNAQYL+RLQFPLGYN++ +L+Y ++T AF ++M+ M TVP GTSF+VYAP++++ LC FT C GYAR L+G+EHED + + D D +++EG L+ +RHAQ Sbjct: 280 RGCRQSPGVALIFNAQYLVRLQFPLGYNYLMMLKYDTASTT-------CAFSRVMSHMETVPFFGTSFSVYAPLLILALCGFTLCNGYARLLSLLGMEHEDAILMGDRDTLDGKVNEGIQLM---RRHAQ 399
BLAST of mRNA_H-paniculata_contig11013.662.1 vs. uniprot
Match: A0A7S4VB21_9STRA (Hypothetical protein n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VB21_9STRA) HSP 1 Score: 113 bits (282), Expect = 2.160e-26 Identity = 59/129 (45.74%), Postives = 86/129 (66.67%), Query Frame = 1 Query: 1 QGNHHSLPEPLLFNAQYLIRLQFPLGYNFMRILRYYGTNSTEVPGLQIPAFQKLMNDMNTVPVLGTSFNVYAPMVLVVLCLFTFCKGYARAQRLVGLEHEDLVSIEDPDG-KARLDEGRGLIERGKRHA 384 +GN S LLFNAQYL+RLQFPLGYN++ ++ Y + T AF +LM+ M+TVPVLGTSF+VYAP++++ LC FT C GY R ++G+EHED + + D + +++EG L+ + +R A Sbjct: 484 RGNRQSHGVALLFNAQYLVRLQFPLGYNYL-LMTKYDISFTNC------AFSQLMSHMDTVPVLGTSFSVYAPLLILALCGFTLCDGYPRLMAVLGVEHEDAILLSDKETLNGKVNEGISLLRKYERRA 605 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11013.662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11013.662.1 >prot_H-paniculata_contig11013.662.1 ID=prot_H-paniculata_contig11013.662.1|Name=mRNA_H-paniculata_contig11013.662.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=141bp QGNHHSLPEPLLFNAQYLIRLQFPLGYNFMRILRYYGTNSTEVPGLQIPAback to top mRNA from alignment at H-paniculata_contig11013:6624..8144- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11013.662.1 ID=mRNA_H-paniculata_contig11013.662.1|Name=mRNA_H-paniculata_contig11013.662.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1521bp|location=Sequence derived from alignment at H-paniculata_contig11013:6624..8144- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11013:6624..8144- >mRNA_H-paniculata_contig11013.662.1 ID=mRNA_H-paniculata_contig11013.662.1|Name=mRNA_H-paniculata_contig11013.662.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=846bp|location=Sequence derived from alignment at H-paniculata_contig11013:6624..8144- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |