mRNA_H-paniculata_contig24428.6614.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig24428.6614.1 vs. uniprot
Match: D8LI40_ECTSI (A to I editase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI40_ECTSI) HSP 1 Score: 154 bits (389), Expect = 2.420e-38 Identity = 133/337 (39.47%), Postives = 159/337 (47.18%), Query Frame = 1
Query: 31 AWRLKPTLRLHLYVSDPPCGDASIYEQATAAEPPLPAQLSTCGNSRFRSATAQGEQNASTVPDLPINNRVVEEGVCSSGDCEYGTASPSHPNAQTQSSGQCYNKRYRSCRSILLDGGRKRGHGSSKETLMSTKGSPAPAADRMTFTGAKIALTVGKDTAPGDDGIGGESSEVKFRGTGDGAVMWTRGVTMPIV-------RE-REQSLGVLRIKSSRSNIYEEGRTMSMSCSDKLAKWAVLGLQGGLLASWIEPLFLSSIVVGADPRADGPAALVKALKRAVPGRA-LQSCRESLEQT-------ETLKS----RAAVSEAMEMMVTTVVFSRSKTQ 981
+WRLKP +RLHLY+SD PCGDASIYEQ A + G R G+ P N D + A S P A ++S G+ +RG G ADR A+ A+ I G S V D + R + + RE EQ +G LRIKSSRSNI EEGRTMSMSCSDKLAKWA LG+QGGLLASW+EP+FLSSIV+ ADPR DGPA L AL RA+PGRA L + R S + T E L R E M + V+ V F+RSK Q
Sbjct: 188 SWRLKPYIRLHLYISDAPCGDASIYEQKRQAP-------NVGGGGSARCGGGDGD---------PGN------------DSSWDDAPRSTPLAGSRSDGE------------------RRGRGD---------------ADRGDAKRARCAVA-----------IAGLSDAVAPSPRPDLPLDEERSCSAASLNPLDCKPREPEEQQVGALRIKSSRSNISEEGRTMSMSCSDKLAKWAFLGVQGGLLASWVEPIFLSSIVISADPRTDGPAPLASALTRAIPGRAALANRRSSFDGTTGTVGGEEHLSHPPMPREEEEERMAVFVSEVTFARSKAQ 452
BLAST of mRNA_H-paniculata_contig24428.6614.1 vs. uniprot
Match: A0A835ZEK1_9STRA (A to I editase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEK1_9STRA) HSP 1 Score: 110 bits (275), Expect = 3.790e-23 Identity = 108/310 (34.84%), Postives = 147/310 (47.42%), Query Frame = 1
Query: 10 LEPNG-RGAWRLKPTLRLHLYVSDPPCGDASIYEQATAAEPPLPAQLSTCGNSRFRSATAQGEQNASTVP--------------------DLPINNRVVEEGVCSSGDCEYGTASPSHPNAQTQS--SGQCYNKRYRSCRSILLDGGRKRGHGSSKETLMSTKGSPAPAADRMTFTGAKIALTV--GKDTAPGDDGIGGESSEVKFRGTGDGAVMWTRGVTMPIVREREQSLGVLRIKSSRSNIYEEGRTMSMSCSDKLAKWAVLGLQGGLLASWIEPLFLSSIVVGADPRADGPAALVKALKRAVPGRA 864
LE G G +RL+ RLHLY+S+PPCGDASIY + A PP + + R +ATA+ +A+ +P T P+ P A + S S C KR + + +K K ST+GS P+ GA +A+T G A G G G ++ G A+ +T + + RE Q++G LR+KS RS++ E RT SMSCSDKLA+WAVLGLQG LL W+EP+ LSS+ V AD RA P A A++RA+ RA
Sbjct: 81 LESTGVEGRFRLRRGHRLHLYISEPPCGDASIYPRV-ADSPPAAVEAAA----RADTATAEAALDATQLPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMVPA-PAAASHSVNSPTCPLKRANNSGAGDAPHAKK-----PKLNGDSTEGSGLPS------DGATMAVTAENGDVVAGGQGGSGAHAA-------GAVAMAYTGAKALTLEREVRQAVGQLRLKSGRSDLRPEDRTESMSCSDKLARWAVLGLQGRLLRRWLEPVLLSSVTVSADARA-APDAQRAAMRRAICDRA 365
BLAST of mRNA_H-paniculata_contig24428.6614.1 vs. uniprot
Match: A0A662XZG5_9STRA (A to I editase domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XZG5_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 5.330e-17 Identity = 53/101 (52.48%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 601 PIVREREQSLGVLRIKSSRSNIYEEGRTMSMSCSDKLAKWAVLGLQGGLLASWIEPLFLSSIVVGADPRADGPAALVKALKRAVPGR-----ALQSCRESL 888
P + EQ+LG+ R+KS RS++ E +T+SMSCSDKLAKW LGLQG LL W EP+FL SIVVG D +A +AL+RAV R AL+S +SL
Sbjct: 218 PPEKRFEQTLGLARVKSGRSDLPVEKQTLSMSCSDKLAKWNALGLQGSLLLQWFEPIFLRSIVVGTDEKAMSAVKQEQALRRAVCTRLQDRHALESTADSL 318
BLAST of mRNA_H-paniculata_contig24428.6614.1 vs. uniprot
Match: A0A662WKZ4_9STRA (A to I editase domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKZ4_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 1.000e-16 Identity = 52/101 (51.49%), Postives = 67/101 (66.34%), Query Frame = 1
Query: 601 PIVREREQSLGVLRIKSSRSNIYEEGRTMSMSCSDKLAKWAVLGLQGGLLASWIEPLFLSSIVVGADPRADGPAALVKALKRAVPGR-----ALQSCRESL 888
P + EQ++G+ R+KS RS++ E +T+SMSCSDKLAKW LGLQG LL W EP+FL SIVVG D +A +AL+RAV R AL+S +SL
Sbjct: 483 PPEKRFEQTMGLARVKSGRSDLPVEKQTLSMSCSDKLAKWNALGLQGSLLLQWFEPIFLRSIVVGTDEKAMSAVKQERALRRAVCTRLQDRHALESTTDSL 583
BLAST of mRNA_H-paniculata_contig24428.6614.1 vs. uniprot
Match: A0A329S331_9STRA (A to I editase domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S331_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 2.950e-16 Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = 1
Query: 601 PIVREREQSLGVLRIKSSRSNIYEEGRTMSMSCSDKLAKWAVLGLQGGLLASWIEPLFLSSIVVGADPRADGPAALVKALKRAVPGRALQSCRESLEQTETLKSRAAV 924
P+ ++ Q++G+ R+KS RS++ E +T+SMSCSDKLA+W LGLQG LL W EP+FLSSI+V D +A +AL+RAV R + R +L + E L AV
Sbjct: 201 PLDKKFAQAVGIARVKSGRSDLPPEKQTLSMSCSDKLARWNALGLQGSLLLQWFEPIFLSSIIVSEDAKAMSVTKQEQALQRAVCARLEE--RNALVEGERLSCETAV 306
BLAST of mRNA_H-paniculata_contig24428.6614.1 vs. uniprot
Match: A0A8J5MBZ2_9STRA (A to I editase domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MBZ2_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 4.280e-16 Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = 1
Query: 601 PIVREREQSLGVLRIKSSRSNIYEEGRTMSMSCSDKLAKWAVLGLQGGLLASWIEPLFLSSIVVGADPRADGPAALVKALKRAVPGRALQSCRESLEQTETLKSRAAV 924
P+ ++ Q++G+ R+KS RS++ E +T+SMSCSDKLA+W LGLQG LL W EP+FLSSI+V D +A +AL+RAV R + R +L + E L AV
Sbjct: 441 PLDKKFAQAVGIARVKSGRSDLPPEKQTLSMSCSDKLARWNALGLQGSLLLQWFEPIFLSSIIVSEDAKAMSVTKQEQALQRAVCARLEE--RNALVEGERLSCETAV 546
BLAST of mRNA_H-paniculata_contig24428.6614.1 vs. uniprot
Match: M4BAQ7_HYAAE (A to I editase domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BAQ7_HYAAE) HSP 1 Score: 89.0 bits (219), Expect = 5.490e-16 Identity = 46/77 (59.74%), Postives = 56/77 (72.73%), Query Frame = 1
Query: 622 QSLGVLRIKSSRSNIYEEGRTMSMSCSDKLAKWAVLGLQGGLLASWIEPLFLSSIVVGADPRADGPAALVKALKRAV 852
Q++ V R+KS RS++ + +T+SMSCSDKLAKW LGLQG LL W EP+FLSSIVV D RA A +ALKRAV
Sbjct: 210 QAISVARVKSGRSDLPPDKQTLSMSCSDKLAKWNALGLQGSLLLQWFEPIFLSSIVVSKDNRAKSVAVQDQALKRAV 286
BLAST of mRNA_H-paniculata_contig24428.6614.1 vs. uniprot
Match: A0A6G0WT42_9STRA (A to I editase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WT42_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 2.540e-15 Identity = 44/88 (50.00%), Postives = 58/88 (65.91%), Query Frame = 1
Query: 613 EREQSLGVLRIKSSRSNIYEEGRTMSMSCSDKLAKWAVLGLQGGLLASWIEPLFLSSIVVGADPRADGPAALVKALKRAVPGRALQSC 876
E +LG+ R+KS RS+I E RT+SMSCSDK+ KW GLQG LL+ W EP+ LS IVV D +AD + +AL+R+V + SC
Sbjct: 174 EHSNALGLARVKSGRSDILPENRTVSMSCSDKICKWLACGLQGNLLSQWFEPIILSGIVVSQDSKADD-GSFHRALQRSVSRSRVDSC 260
BLAST of mRNA_H-paniculata_contig24428.6614.1 vs. uniprot
Match: A0A2P4XLQ8_9STRA (tRNA-specific adenosine deaminase n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XLQ8_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 2.830e-15 Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 1
Query: 601 PIVREREQSLGVLRIKSSRSNIYEEGRTMSMSCSDKLAKWAVLGLQGGLLASWIEPLFLSSIVVGADPRADGPAALVKALKRAVPGR 861
P ++ Q++G+ R+KS RS++ E +T+SMSCSDKLAKW LGLQG LL W EP+FLSSIVV D +A +AL+RA+ R
Sbjct: 209 PADKKFAQAVGIARMKSGRSDLPLEKQTLSMSCSDKLAKWNALGLQGSLLLQWFEPIFLSSIVVSGDDQAMSVVKQEQALQRALCAR 295
BLAST of mRNA_H-paniculata_contig24428.6614.1 vs. uniprot
Match: K3WR94_GLOUD (A to I editase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WR94_GLOUD) HSP 1 Score: 86.3 bits (212), Expect = 4.550e-15 Identity = 45/91 (49.45%), Postives = 61/91 (67.03%), Query Frame = 1
Query: 601 PIVREREQSLGVLRIKSSRSNIYEEGRTMSMSCSDKLAKWAVLGLQGGLLASWIEPLFLSSIVVGADPRADGPAALVKALKRAVPGRALQS 873
P + +Q +G+ R+KS RS++ + +T+SMSCSDKLAKW +G+QG LL W EPLFL SIVV D AA +AL+RA+ GR +S
Sbjct: 228 PPEKRFDQMVGIARVKSGRSDLPPDKQTLSMSCSDKLAKWNAVGIQGTLLLQWYEPLFLRSIVVSRDDTCVSTAAQYEALERAICGRFKES 318 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24428.6614.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig24428.6614.1 >prot_H-paniculata_contig24428.6614.1 ID=prot_H-paniculata_contig24428.6614.1|Name=mRNA_H-paniculata_contig24428.6614.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=327bp MLLLEPNGRGAWRLKPTLRLHLYVSDPPCGDASIYEQATAAEPPLPAQLSback to top mRNA from alignment at H-paniculata_contig24428:278..1644- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig24428.6614.1 ID=mRNA_H-paniculata_contig24428.6614.1|Name=mRNA_H-paniculata_contig24428.6614.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1367bp|location=Sequence derived from alignment at H-paniculata_contig24428:278..1644- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig24428:278..1644- >mRNA_H-paniculata_contig24428.6614.1 ID=mRNA_H-paniculata_contig24428.6614.1|Name=mRNA_H-paniculata_contig24428.6614.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1962bp|location=Sequence derived from alignment at H-paniculata_contig24428:278..1644- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |