mRNA_H-paniculata_contig24409.6610.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig24409.6610.1 vs. uniprot
Match: D7G0S6_ECTSI (Similar to ubiquitin specific peptidase 15 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0S6_ECTSI) HSP 1 Score: 399 bits (1024), Expect = 2.190e-126 Identity = 189/247 (76.52%), Postives = 217/247 (87.85%), Query Frame = 1
Query: 40 FYRTHTKGKPLARGSVGLTNLGNTCFMNSMLQCLLSTESLSTYFRNLAWKNEMNEKNPLGMGGKVAEAYADLNDAVWSGEYSVVVPNHLKRVVAQYAPMFSGYNQHDAGELMSFLLDGIHEDLNRVHKKPYMEPVDSAGREDAVIADESWRRYLMRNDSIMVDVCTGLLRSHVTCPMCQHASVTFDPYTSLSLPLPVEDAIMVEVLFHPMPYGTRPMMMAFTLSKESKVRELKTMLCERINKERQTS 780
FYRT+TK KP+ RG+VGL+NLGNTCFMNSMLQCLL+TESLSTYFR+ WK E+NE NPLGMGGK+A AYA LND WSGEYSVVVPN +K+VV+QYAPMF+GY QHDA ELMSFLLDGIHEDLNRVHKKPYME VDSAGR D V+A+ESWRRYLMRNDS+MVD CTGLLRSHVTCP C +SVTFDPYTSLSLPLP + A+MV+VLFHP+PYG+RPM +A TL K++ VR+LKT +C+R N+ER S
Sbjct: 527 FYRTNTKAKPITRGAVGLSNLGNTCFMNSMLQCLLATESLSTYFRSQHWKREVNEDNPLGMGGKMAAAYAGLNDDAWSGEYSVVVPNTVKKVVSQYAPMFAGYQQHDASELMSFLLDGIHEDLNRVHKKPYMETVDSAGRADRVVAEESWRRYLMRNDSVMVDTCTGLLRSHVTCPECNLSSVTFDPYTSLSLPLPFDTAVMVKVLFHPLPYGSRPMEVAVTLQKDNTVRDLKTAICQRYNQERPQS 773
BLAST of mRNA_H-paniculata_contig24409.6610.1 vs. uniprot
Match: A0A836CC49_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC49_9STRA) HSP 1 Score: 257 bits (656), Expect = 2.500e-80 Identity = 123/204 (60.29%), Postives = 154/204 (75.49%), Query Frame = 1
Query: 16 SGSFSTGTFYRTHTKGKPLARGSVGLTNLGNTCFMNSMLQCLLSTESLSTYFRNLAWKNEMNEKNPLGMGGKVAEAYADLNDAVWSGEYSVVVPNHLKRVVAQYAPMFSGYNQHDAGELMSFLLDGIHEDLNRVHKKPYMEPVDSAGREDAVIADESWRRYLMRNDSIMVDVCTGLLRSHVTCPMCQHASVTFDPYTSLSLPLP 627
SG +S G R +T G P G+VGL NLGNTCFMNSMLQCL +T +L+ YF++ W ++NE N LG GK+A AYA+L +W G Y+ V P LKRV+ ++AP F+GY Q D+ ELM FLLDG+HEDLNRV +KPY+E V+S GR DAV+A++SWRRYL+RNDS++VD C GLLRSHVTCP C + S+TFD YT LSLPLP
Sbjct: 37 SGGYSWGE--RGNTVGTPAEPGAVGLHNLGNTCFMNSMLQCLSATGALTAYFKSGGWSVDLNEDNALGADGKMARAYAELVRNLWDGRYTQVAPAALKRVIGEHAPAFAGYQQQDSQELMIFLLDGLHEDLNRVRRKPYVEAVESDGRPDAVVAEDSWRRYLLRNDSVLVDRCHGLLRSHVTCPACNYESITFDAYTCLSLPLP 238
BLAST of mRNA_H-paniculata_contig24409.6610.1 vs. uniprot
Match: A0A6S8CHP7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8CHP7_9STRA) HSP 1 Score: 249 bits (635), Expect = 3.260e-74 Identity = 125/239 (52.30%), Postives = 160/239 (66.95%), Query Frame = 1
Query: 25 FSTGTFYRTHTKGKPLARGSVGLTNLGNTCFMNSMLQCLLSTESLSTYFRNLAW-KNEMNEKNPLGMGGKVAEAYADLNDAVWSGEYSVVVPNHLKRVVAQYAPMFSGYNQHDAGELMSFLLDGIHEDLNRVHKKPYMEPVDSAGREDAVIADESWRRYLMRNDSIMVDVCTGLLRSHVTCPMCQHASVTFDPYTSLSLPLPVEDAIMVEVLFHPMPYGTRPMMMAFTLSKESKVRELK 738
F + ++ R H KG P A G+VGL+NLGNTCFMNSMLQCL T+ L YF N ++E+NE NPLG GG +A AYAD WSG+Y+++VP LK+ V Q A F GY Q D+ E MS+LLDG+HEDLNRV KKPY+E ++S GR D V+A+ESW R+ +RN SI++D GLLRSH+TCP C H S+TFDPY +LSLPLP + + G+RP LS + +LK
Sbjct: 459 FLSQSYGRPHHKGTPPAPGAVGLSNLGNTCFMNSMLQCLSHTKQLREYFLNAERVQSELNEDNPLGSGGNIARAYADFISDSWSGDYAIIVPTILKKAVGQQASQFLGYQQQDSQEFMSYLLDGLHEDLNRVRKKPYIETLESNGRPDQVVANESWDRFQLRNKSIIIDTFYGLLRSHITCPNCGHESITFDPYNTLSLPLPSAKIRRITITLSRAD-GSRPTKYLVQLSSRDTITQLK 696
BLAST of mRNA_H-paniculata_contig24409.6610.1 vs. uniprot
Match: A0A7R9YEL1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YEL1_9STRA) HSP 1 Score: 249 bits (635), Expect = 1.060e-73 Identity = 119/232 (51.29%), Postives = 157/232 (67.67%), Query Frame = 1
Query: 58 KGKPLARGSVGLTNLGNTCFMNSMLQCLLSTESLSTYFRNLAWKNEMNEKNPLGMGGKVAEAYADLNDAVWSGEYSVVVPNHLKRVVAQYAPMFSGYNQHDAGELMSFLLDGIHEDLNRVHKKPYMEPVDSAGREDAVIADESWRRYLMRNDSIMVDVCTGLLRSHVTCPMCQHASVTFDPYTSLSLPLPVEDAIMVEVLFHPMPYGTRPMMMAFTLSKESKVRELKTMLCE 753
+GKP G+VGL NLGNTCFMNSMLQC+ T L+ +F N W++++N+ NPLGM GK+A YAD VW G ++VV P LKR V + P F+GY Q D+ E MSFLLDG+HEDLNR H+KPY E V+S GR D +A E WRR+L+RNDS++VD C GLLRSH+TC C + S+TFDP+ SLSLPLPV + V+++ P P M + + + ++K + E
Sbjct: 500 RGKPPIAGAVGLKNLGNTCFMNSMLQCISHTPQLTGFFLNGGWRDDVNKSNPLGMQGKLATVYADFLKDVWGGNHTVVAPTTLKRTVGTFNPTFAGYAQQDSQEFMSFLLDGLHEDLNRNHEKPYTEQVESKGRPDEEVAKEQWRRHLLRNDSVVVDNCHGLLRSHLTCCKCGYNSITFDPFLSLSLPLPVNNTRRVDLVVMPAALSENPYRMTVDMQTNACLGDVKRWIAE 731
BLAST of mRNA_H-paniculata_contig24409.6610.1 vs. uniprot
Match: A0A7S2W2S4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2S4_9STRA) HSP 1 Score: 246 bits (629), Expect = 1.650e-71 Identity = 122/237 (51.48%), Postives = 160/237 (67.51%), Query Frame = 1
Query: 46 RTHTKGKPLARGSVGLTNLGNTCFMNSMLQCLLSTESLSTYFRNLAWKNEMNEKNPLGMGGKVAEAYADLNDAVWSGEYSVVVPNHLKRVVAQYAPMFSGYNQHDAGELMSFLLDGIHEDLNRVHKKPYMEPVDSA-GREDAVIADESWRRYLMRNDSIMVDVCTGLLRSHVTCPMCQHASVTFDPYTSLSLPLPVEDA-----IMVEVLFHPMPY-GTRPMMMAFTLSKESKVREL 735
R G+P+A G+VGL NLGNTCFMNSMLQC+ T L+ +F +K ++N +N LG GGK+ EAY++L +WS YS + P K V+ ++AP F+GY QHD+ E MSFL+DGIHEDLNRV KKPY E V+ G+ D +A+E+WRR+L+RNDS++VD C GLLRSH+ CP C+H SVTFDPY SLSLPLP ++ V F P+P G + M T+ VR+L
Sbjct: 456 RASVTGEPVASGAVGLINLGNTCFMNSMLQCVAQTPLLTPFFLEGKFKGDLNRRNALGTGGKLTEAYSELLKKIWSSSYSTLAPKEFKAVLGKHAPQFAGYQQHDSQEFMSFLMDGIHEDLNRVKKKPYTEVVEGGDGKPDEEVANEAWRRHLLRNDSVIVDHCEGLLRSHLVCPKCKHESVTFDPYMSLSLPLPTASRRAARNTVLSVTFVPLPSKGGKLRPMDLTVPSRGTVRDL 692
BLAST of mRNA_H-paniculata_contig24409.6610.1 vs. uniprot
Match: A0A2C9JIB0_BIOGL (Ubiquitinyl hydrolase 1 n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JIB0_BIOGL) HSP 1 Score: 243 bits (621), Expect = 1.660e-71 Identity = 117/233 (50.21%), Postives = 161/233 (69.10%), Query Frame = 1
Query: 40 FYRTHTKGKPLAR-GSVGLTNLGNTCFMNSMLQCLLSTESLSTYFRNLAWKNEMNEKNPLGMGGKVAEAYADLNDAVWSGEYSVVVPNHLKRVVAQYAPMFSGYNQHDAGELMSFLLDGIHEDLNRVHKKPYMEPVDSAGREDAVIADESWRRYLMRNDSIMVDVCTGLLRSHVTCPMCQHASVTFDPYTSLSLPLPVEDAIMVEVLFHPMPYGTRPMMMAFTLSKESKVREL 735
+Y T++ ++ G GL NLGNTCFMNS LQC+L+ L+ Y + W+ E+N++NPLGM G+VA YA+L VWSG+ S VP + K V ++AP FSGY Q D+ ELM+FLLDG+HEDLNR+ KKPY+E DS GR D ++A E+W Y RNDS++VD+ GLL+S V CP C+ SVTFDP+ +LSLPLPV+ +EV++ P+P +PM + T+ K +R+L
Sbjct: 273 YYNTYSDRSGTSKPGLCGLANLGNTCFMNSALQCMLNVSRLTDYMLSGKWEKELNKENPLGMKGEVAITYAELVRDVWSGQRSYTVPRNFKVAVGRFAPQFSGYQQQDSQELMAFLLDGLHEDLNRIRKKPYIELKDSGGRPDKIVAKEAWDNYKKRNDSVIVDIFHGLLKSTVRCPDCEKISVTFDPFCNLSLPLPVKKERQMEVIWVPLPPEKKPMQLKLTVPKTGSIRDL 505
BLAST of mRNA_H-paniculata_contig24409.6610.1 vs. uniprot
Match: A0A7S1XMK1_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMK1_9STRA) HSP 1 Score: 246 bits (628), Expect = 4.180e-71 Identity = 122/231 (52.81%), Postives = 157/231 (67.97%), Query Frame = 1
Query: 34 GTF-YRTHTKGKPLARGSVGLTNLGNTCFMNSMLQCLLSTESLSTYFRNLAWKNEMNEKNPLGMGGKVAEAYADLNDAVWSGEYSVVVPNHLKRVVAQYAPMFSGYNQHDAGELMSFLLDGIHEDLNRVHKKPYMEPVDSAGREDAVIADESWRRYLMRNDSIMVDVCTGLLRSHVTCPMCQHASVTFDPYTSLSLPLPVEDAIMVEVLFHPMPYGTRPMMMAFTLSKESK 723
GT+ Y + T+G+P G+VGL NLGNTCFMNSMLQC+ T L+++F W+ ++N+ NPLGM GK+A YAD VW G ++VV P LKR V + P F+GY Q D+ E MSFLLDG+HEDLNR KPY E V+S GR DA +A E WRR+L+RNDS++VD C GLLRSH+TC C + S+TFDP+ SLSLPLPV + V + + RP M T+ ES+
Sbjct: 496 GTYGYDSGTRGRPPVAGAVGLRNLGNTCFMNSMLQCISHTPQLTSFFLGGEWRKDVNKDNPLGMNGKLATVYADFLKDVWGGNHTVVAPTGLKRTVGNFNPTFAGYAQQDSQEFMSFLLDGLHEDLNRNQTKPYTEQVESKGRPDAEVAAEQWRRHLLRNDSVVVDHCHGLLRSHLTCCKCSNDSITFDPFLSLSLPLPVHNTRAVSIFLLRVDLSLRPEKM--TVDMESR 724
BLAST of mRNA_H-paniculata_contig24409.6610.1 vs. uniprot
Match: A0A397CIK1_9STRA (USP domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CIK1_9STRA) HSP 1 Score: 241 bits (615), Expect = 4.870e-71 Identity = 114/206 (55.34%), Postives = 150/206 (72.82%), Query Frame = 1
Query: 28 STGTFYRTHTKGKPLARGSVGLTNLGNTCFMNSMLQCLLSTESLSTYFRNL------AWKNEMNEKNPLGMGGKVAEAYADLNDAVWSGEYSVVVPNHLKRVVAQYAPMFSGYNQHDAGELMSFLLDGIHEDLNRVHKKPYMEPVDSAGREDAVIADESWRRYLMRNDSIMVDVCTGLLRSHVTCPMCQHASVTFDPYTSLSLPLP 627
S+ ++ T K +G VGL NLGNTCF+NS+LQCL +++ L YF + E+N +NPLGMGGK+A+AYA L + +WSGE VV P+ LK V+ +YAP F+GY QHD+ E++SF+LDGIHEDLNRV +KPY +P++ AGR DA +A+E W YL+RNDS++VD C LRSHVTCP CQ+ S+TFDPY SLSLP+P
Sbjct: 559 SSSGYHSTKYTAKAEFQGVVGLQNLGNTCFLNSVLQCLSNSKPLLDYFFQTDNDGGRVYMREINPRNPLGMGGKIAKAYAKLMEKMWSGESKVVTPSDLKYVIGEYAPAFAGYAQHDSQEVLSFILDGIHEDLNRVLEKPYTKPIEHAGRPDADVAEEEWANYLLRNDSVVVDHCMAQLRSHVTCPSCQNESITFDPYMSLSLPVP 764
BLAST of mRNA_H-paniculata_contig24409.6610.1 vs. uniprot
Match: A0A8B6DHW2_MYTGA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6DHW2_MYTGA) HSP 1 Score: 239 bits (610), Expect = 1.970e-70 Identity = 118/253 (46.64%), Postives = 165/253 (65.22%), Query Frame = 1
Query: 10 SGSGSFSTGTFYRTHTKGKPLARGSVGLTNLGNTCFMNSMLQCLLSTESLSTYFRNLAWKNEMNEKNPLGMGGKVAEAYADLNDAVWSGEYSVVVPNHLKRVVAQYAPMFSGYNQHDAGELMSFLLDGIHEDLNRVHKKPYMEPVDSAGREDAVIADESWRRYLMRNDSIMVDVCTGLLRSHVTCPMCQHASVTFDPYTSLSLPLPVEDAIMVEVLFHPMPYGTRPMMMAFTLSKESKVRELKTMLCERINKE 768
SG G S G + +G +A G GL+NLGNTCFMNS +QC+ + L+ Y + W +E+NE NPLGMGG++A++YA+L +WSG+YS VP + K V ++AP FSGY Q D+ EL++FLLDG+HEDLNR+HKKPY+E D+ R D ++A ESW Y RNDS++VD GLL+S V CP C SVTFDP+ LSLPLPV+ +E+ + P+ +P+ + K V ++ +L E++ E
Sbjct: 83 SGYGGSSYGYYGXDQGRGGSVAPGLCGLSNLGNTCFMNSAIQCMSNVPKLTEYLLSDRWISEVNESNPLGMGGEIAKSYAELIKVMWSGKYSHTVPRNFKVAVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRIHKKPYIEQKDTDDRPDELVAKESWENYRKRNDSVIVDTFHGLLKSTVHCPECDKISVTFDPFCYLSLPLPVKKERQLEIFWVPLSPEKKPVQFKLIVPKMGSVLDMCKILSEKVGVE 335
BLAST of mRNA_H-paniculata_contig24409.6610.1 vs. uniprot
Match: A0A397DTH8_9STRA (USP domain-containing protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DTH8_9STRA) HSP 1 Score: 244 bits (622), Expect = 2.270e-70 Identity = 122/246 (49.59%), Postives = 168/246 (68.29%), Query Frame = 1
Query: 28 STGTFYRTHTKGKPLARGSVGLTNLGNTCFMNSMLQCLLSTESLSTYFRNL------AWKNEMNEKNPLGMGGKVAEAYADLNDAVWSGEYSVVVPNHLKRVVAQYAPMFSGYNQHDAGELMSFLLDGIHEDLNRVHKKPYMEPVDSAGREDAVIADESWRRYLMRNDSIMVDVCTGLLRSHVTCPMCQHASVTFDPYTSLSLPLPVEDAIMVEVLFHPMPYGTRPMMMAFTLSKESKVRELKTML 747
S+ ++ T K +G VGL NLGNTCF+NS+LQCL +++ L YF + E+N +NPLGMGGK+A+AYA L + +WSGE VV P+ LK V+ +YAP F+GY QHD+ E++SF+LDGIHEDLNRV +KPY +P++ AGR DA +A+E W YL+RNDS++VD C LRSHVTCP CQ+ S+TFDPY SLSLP+P + +++ + H + G+RP + KE ++K L
Sbjct: 516 SSSGYHSTKYTAKAEFQGVVGLQNLGNTCFLNSVLQCLSNSKPLLDYFFQTDNDGGRVYMREINPRNPLGMGGKIAKAYAKLMEKMWSGESKVVTPSDLKYVIGEYAPAFAGYAQHDSQEVLSFILDGIHEDLNRVLEKPYTKPIEHAGRPDADVAEEEWANYLLRNDSVVVDHCMAQLRSHVTCPSCQNESITFDPYMSLSLPVPNQAWVLLTL--HGI--GSRPTQFGLHVPKEGVYADVKAAL 757 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24409.6610.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig24409.6610.1 >prot_H-paniculata_contig24409.6610.1 ID=prot_H-paniculata_contig24409.6610.1|Name=mRNA_H-paniculata_contig24409.6610.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=260bp RQRSGSGSFSTGTFYRTHTKGKPLARGSVGLTNLGNTCFMNSMLQCLLSTback to top mRNA from alignment at H-paniculata_contig24409:93..3507- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig24409.6610.1 ID=mRNA_H-paniculata_contig24409.6610.1|Name=mRNA_H-paniculata_contig24409.6610.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3415bp|location=Sequence derived from alignment at H-paniculata_contig24409:93..3507- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig24409:93..3507- >mRNA_H-paniculata_contig24409.6610.1 ID=mRNA_H-paniculata_contig24409.6610.1|Name=mRNA_H-paniculata_contig24409.6610.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1560bp|location=Sequence derived from alignment at H-paniculata_contig24409:93..3507- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |