prot_H-paniculata_contig24403.6609.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24403.6609.1
Unique Nameprot_H-paniculata_contig24403.6609.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length88
Homology
BLAST of mRNA_H-paniculata_contig24403.6609.1 vs. uniprot
Match: A0A6H5K111_9PHAE (TrmE-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K111_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 1.260e-40
Identity = 76/87 (87.36%), Postives = 81/87 (93.10%), Query Frame = 0
Query:    1 MGHLEAEVRSRFQGAEDDESPLITRRRHRQHVESCLSALRASQRANLPLDLAAEELRISNRELGRITGAVGVEELLDVIFRDFCIGK 87
            M HLEAEVRSRFQGA DDESPLITRRRHRQHVE+CL ALRA+QR  +PLDLAAEELRI++ ELGRITGAVGVEELLDVIFRDFCIGK
Sbjct:  541 MEHLEAEVRSRFQGAADDESPLITRRRHRQHVEACLLALRAAQRPQMPLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK 627          
BLAST of mRNA_H-paniculata_contig24403.6609.1 vs. uniprot
Match: D8LG51_ECTSI (TrmE, organellal GTPase involved in tRNA modification n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG51_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 2.870e-40
Identity = 76/87 (87.36%), Postives = 81/87 (93.10%), Query Frame = 0
Query:    1 MGHLEAEVRSRFQGAEDDESPLITRRRHRQHVESCLSALRASQRANLPLDLAAEELRISNRELGRITGAVGVEELLDVIFRDFCIGK 87
            M HLEAEVRSRFQGA DDESPLITRRRHRQHVE+CL ALRA+QR  +PLDLAAEELRI++ ELGRITGAVGVEELLDVIFRDFCIGK
Sbjct:  704 MEHLEAEVRSRFQGAADDESPLITRRRHRQHVEACLLALRAAQRPQMPLDLAAEELRIASSELGRITGAVGVEELLDVIFRDFCIGK 790          
BLAST of mRNA_H-paniculata_contig24403.6609.1 vs. uniprot
Match: A0A836CK05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK05_9STRA)

HSP 1 Score: 112 bits (279), Expect = 3.640e-27
Identity = 58/88 (65.91%), Postives = 69/88 (78.41%), Query Frame = 0
Query:    1 MGHLEAEVRSRFQGAEDDE-SPLITRRRHRQHVESCLSALRASQRANLPLDLAAEELRISNRELGRITGAVGVEELLDVIFRDFCIGK 87
            + HLE E+  R+Q  +  E +PLITR RHR HV++CLSAL  S   +LP+DLAAEELR ++ ELGRITGAV VEELLDVIFRDFCIGK
Sbjct:  386 LRHLEDEIARRYQTQQGQEDAPLITRARHRHHVQACLSALEGSMDPSLPMDLAAEELRYASAELGRITGAVDVEELLDVIFRDFCIGK 473          
BLAST of mRNA_H-paniculata_contig24403.6609.1 vs. uniprot
Match: A0A4D9CTT5_9STRA (TrmE-type G domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTT5_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.420e-21
Identity = 53/77 (68.83%), Postives = 61/77 (79.22%), Query Frame = 0
Query:   14 GAEDD--ESPLITRRRHRQHVESCLSALRASQ-RANLPLDLAAEELRISNRELGRITGAVGVEELLDVIFRDFCIGK 87
            G +D+  E+P+ITR RHR HVE CL AL AS     L LD+AAEELRI++ ELGRITGAV VEE+LDVIFRDFCIGK
Sbjct:  389 GTDDERAEAPVITRARHRVHVERCLEALTASMGEQGLGLDVAAEELRIASTELGRITGAVDVEEVLDVIFRDFCIGK 465          
BLAST of mRNA_H-paniculata_contig24403.6609.1 vs. uniprot
Match: A0A7S2USR2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USR2_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.550e-21
Identity = 53/88 (60.23%), Postives = 65/88 (73.86%), Query Frame = 0
Query:    1 MGHLEAEVRSRFQGAEDDESPLITRRRHRQHVESCLSALR-ASQRANLPL-DLAAEELRISNRELGRITGAVGVEELLDVIFRDFCIG 86
            + HL  EV+ +F  + +D +PLITR RHR H+E C+ AL  A+  AN    DLAAEELR++  ELGRITGAV VEE+LDVIFRDFCIG
Sbjct:  156 LSHLATEVKRKFDRSGED-APLITRSRHRTHIERCVQALETAALLANTAATDLAAEELRVAALELGRITGAVDVEEVLDVIFRDFCIG 242          
BLAST of mRNA_H-paniculata_contig24403.6609.1 vs. uniprot
Match: R1DA12_EMIHU (TrmE-type G domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DA12_EMIHU)

HSP 1 Score: 95.5 bits (236), Expect = 4.660e-21
Identity = 50/82 (60.98%), Postives = 61/82 (74.39%), Query Frame = 0
Query:   11 RFQGAEDDESPLITRRRHRQHVESCLSALR-----ASQRANLPLDLAAEELRISNRELGRITGAVGVEELLDVIFRDFCIGK 87
            R  G+++ E+PL+TR RHRQH+E C++AL      AS     PLDLA EELR ++ ELGRITG V VEE+LDVIFRDFCIGK
Sbjct:  467 RLYGSDEGETPLVTRARHRQHLEGCVAALAQFEELASLGEAAPLDLACEELRTASLELGRITGRVDVEEVLDVIFRDFCIGK 548          
BLAST of mRNA_H-paniculata_contig24403.6609.1 vs. uniprot
Match: A0A7S3BYM8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BYM8_9EUKA)

HSP 1 Score: 87.8 bits (216), Expect = 1.500e-20
Identity = 48/79 (60.76%), Postives = 59/79 (74.68%), Query Frame = 0
Query:   14 GAEDDESPLITRRRHRQHVESCLSALRASQR-ANL----PLDLAAEELRISNRELGRITGAVGVEELLDVIFRDFCIGK 87
            GA + E  L+TR RHR+H+ +C+ AL A +  A+L    PLDLAAEELR +  E+GRITG + VEELLDVIFRDFCIGK
Sbjct:   40 GASEREPVLVTRARHREHLRACVEALDAFEDLASLGDATPLDLAAEELRTAANEIGRITGRIDVEELLDVIFRDFCIGK 118          
BLAST of mRNA_H-paniculata_contig24403.6609.1 vs. uniprot
Match: A0A0M0JVR3_9EUKA (tRNA modification gtpase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JVR3_9EUKA)

HSP 1 Score: 92.4 bits (228), Expect = 5.030e-20
Identity = 51/79 (64.56%), Postives = 58/79 (73.42%), Query Frame = 0
Query:   14 GAEDDESPLITRRRHRQHVESCLSALRA-SQRANL----PLDLAAEELRISNRELGRITGAVGVEELLDVIFRDFCIGK 87
            GA D E+ LITR RHR+H+  C  AL A  Q A L    PLDLAAEE+RI+  ELG+ITG + VEELLDVIFRDFCIGK
Sbjct:  403 GASDREAALITRARHREHLRRCADALEAFEQYAGLGDSAPLDLAAEEIRIAANELGKITGRIDVEELLDVIFRDFCIGK 481          
BLAST of mRNA_H-paniculata_contig24403.6609.1 vs. uniprot
Match: A0A813AKH5_9DINO (MnmE protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AKH5_9DINO)

HSP 1 Score: 90.1 bits (222), Expect = 5.890e-20
Identity = 52/89 (58.43%), Postives = 60/89 (67.42%), Query Frame = 0
Query:    1 MGHLEAEVRSRFQGAEDDES--PLITRRRHRQHVESCLSALRASQRANLPLDLAAEELRISNRELGRITGAVGVEELLDVIFRDFCIGK 87
            +  LE E+R+R+ GA D ES   LITR RHRQHVE CL  L         +DLAAEELR +   LGRITG V VE+LLD+IF DFCIGK
Sbjct:  188 LSGLEEEIRTRY-GAMDAESNSTLITRERHRQHVEECLRCLEGFLAQPATVDLAAEELRRAMTSLGRITGRVDVEDLLDIIFTDFCIGK 275          
BLAST of mRNA_H-paniculata_contig24403.6609.1 vs. uniprot
Match: A0A7S0NV32_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NV32_9EUKA)

HSP 1 Score: 87.8 bits (216), Expect = 3.230e-19
Identity = 47/79 (59.49%), Postives = 57/79 (72.15%), Query Frame = 0
Query:   14 GAEDDESPLITRRRHRQHVESCLSALRA-----SQRANLPLDLAAEELRISNRELGRITGAVGVEELLDVIFRDFCIGK 87
            GA   E  L+TR RHRQH+ +C++A+ A     S+    P+D+AAEELR +  ELGRITG V VEELLDVIFRDFCIGK
Sbjct:  177 GASQREPALVTRARHRQHLGACVAAMEAYADLASRGDAAPVDIAAEELRTAVNELGRITGRVDVEELLDVIFRDFCIGK 255          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24403.6609.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K111_9PHAE1.260e-4087.36TrmE-type G domain-containing protein n=1 Tax=Ecto... [more]
D8LG51_ECTSI2.870e-4087.36TrmE, organellal GTPase involved in tRNA modificat... [more]
A0A836CK05_9STRA3.640e-2765.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CTT5_9STRA1.420e-2168.83TrmE-type G domain-containing protein n=4 Tax=Mono... [more]
A0A7S2USR2_9STRA1.550e-2160.23Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
R1DA12_EMIHU4.660e-2160.98TrmE-type G domain-containing protein n=2 Tax=Emil... [more]
A0A7S3BYM8_9EUKA1.500e-2060.76Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A0M0JVR3_9EUKA5.030e-2064.56tRNA modification gtpase n=1 Tax=Chrysochromulina ... [more]
A0A813AKH5_9DINO5.890e-2058.43MnmE protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A7S0NV32_9EUKA3.230e-1959.49Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 4..18
e-value: 6.9E-22
score: 80.8
NoneNo IPR availablePANTHERPTHR42714:SF2TRNA MODIFICATION GTPASE GTPBP3, MITOCHONDRIALcoord: 9..87
NoneNo IPR availablePANTHERPTHR42714FAMILY NOT NAMEDcoord: 9..87
NoneNo IPR availableSUPERFAMILY116878TrmE connector domaincoord: 17..87
IPR027368tRNA modification GTPase MnmE domain 2GENE3D1.20.120.430coord: 19..87
e-value: 6.9E-22
score: 80.8
IPR025867MnmE, helical domainPFAMPF12631MnmE_helicalcoord: 3..84
e-value: 6.2E-19
score: 69.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24403contigH-paniculata_contig24403:697..1726 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24403.6609.1mRNA_H-paniculata_contig24403.6609.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24403 415..2168 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24403.6609.1 ID=prot_H-paniculata_contig24403.6609.1|Name=mRNA_H-paniculata_contig24403.6609.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=88bp
MGHLEAEVRSRFQGAEDDESPLITRRRHRQHVESCLSALRASQRANLPLD
LAAEELRISNRELGRITGAVGVEELLDVIFRDFCIGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027368MnmE_dom2
IPR025867MnmE_helical