prot_H-paniculata_contig24365.6601.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24365.6601.1
Unique Nameprot_H-paniculata_contig24365.6601.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length110
Homology
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BLAST of mRNA_H-paniculata_contig24365.6601.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 3.260e-8
Identity = 40/116 (34.48%), Postives = 61/116 (52.59%), Query Frame = 0 
Query:    2 LSSTGGGEFNVTWQGRVIIDRAFNVSGGTQLTVTGSATSANNEGDAIIDAQSSTGMFTVADGSTLRLINLVLEGGNNTL--------GGSVYSKGPS-LVSVVDCNFTNNDAVRGG 108
            L  +G GEF V WQG V+++R   +S G+ + VTG++      G+A+ID   +  +F V DGSTL L  L L  G  T         GG+V  +    +++   C+F  N+A+  G
Sbjct:   46 LLCSGAGEFEVEWQGEVLLERPIFISNGSYVKVTGASA-----GEAVIDGGDAVVLFNVNDGSTLELDALSLVRGVATYTATYSYGGGGAVILRSDDCILTASSCSFIGNNAIDSG 156
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24365.6601.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JWI3_9PHAE3.260e-834.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 13..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24365contigH-paniculata_contig24365:3141..3470 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24365.6601.1mRNA_H-paniculata_contig24365.6601.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24365 3141..3470 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24365.6601.1 ID=prot_H-paniculata_contig24365.6601.1|Name=mRNA_H-paniculata_contig24365.6601.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=110bp
MLSSTGGGEFNVTWQGRVIIDRAFNVSGGTQLTVTGSATSANNEGDAIID
AQSSTGMFTVADGSTLRLINLVLEGGNNTLGGSVYSKGPSLVSVVDCNFT
NNDAVRGGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence