prot_H-paniculata_contig24348.6595.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24348.6595.1
Unique Nameprot_H-paniculata_contig24348.6595.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length166
Homology
BLAST of mRNA_H-paniculata_contig24348.6595.1 vs. uniprot
Match: A0A6H5K1D8_9PHAE (MCM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D8_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 3.100e-26
Identity = 60/80 (75.00%), Postives = 64/80 (80.00%), Query Frame = 0
Query:    1 MCRTQVTLQDAVVSVICVETSLHSTAQLGMESVLHSDFPPNPDEEFEIQQGLILDRLGLSHFHRPRGPPQPPPLSGETSR 80
            MCRT+VTLQDAVVSVICVETSLHSTAQLG++SVLHSDFPPNPDEEFE+QQGLILDRL L           PPPL   T R
Sbjct:  258 MCRTEVTLQDAVVSVICVETSLHSTAQLGVDSVLHSDFPPNPDEEFELQQGLILDRLKLRS---------PPPLPFVTRR 328          
BLAST of mRNA_H-paniculata_contig24348.6595.1 vs. uniprot
Match: D7G551_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G551_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 4.360e-26
Identity = 54/59 (91.53%), Postives = 58/59 (98.31%), Query Frame = 0
Query:    1 MCRTQVTLQDAVVSVICVETSLHSTAQLGMESVLHSDFPPNPDEEFEIQQGLILDRLGL 59
            MCRT+VTLQDAVVSVICVETSLHSTAQLG++SVLHSDFPPNPDEEFE+QQGLILDRL L
Sbjct:  241 MCRTEVTLQDAVVSVICVETSLHSTAQLGVDSVLHSDFPPNPDEEFELQQGLILDRLKL 299          
BLAST of mRNA_H-paniculata_contig24348.6595.1 vs. uniprot
Match: D8LM73_ECTSI (MCM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM73_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 5.950e-26
Identity = 54/59 (91.53%), Postives = 58/59 (98.31%), Query Frame = 0
Query:    1 MCRTQVTLQDAVVSVICVETSLHSTAQLGMESVLHSDFPPNPDEEFEIQQGLILDRLGL 59
            MCRT+VTLQDAVVSVICVETSLHSTAQLG++SVLHSDFPPNPDEEFE+QQGLILDRL L
Sbjct:  642 MCRTEVTLQDAVVSVICVETSLHSTAQLGVDSVLHSDFPPNPDEEFELQQGLILDRLKL 700          
BLAST of mRNA_H-paniculata_contig24348.6595.1 vs. uniprot
Match: A0A6H5JX13_9PHAE (MCM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX13_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 9.990e-17
Identity = 41/44 (93.18%), Postives = 44/44 (100.00%), Query Frame = 0
Query:    1 MCRTQVTLQDAVVSVICVETSLHSTAQLGMESVLHSDFPPNPDE 44
            MCRT+VTLQDAVVSVICVETSLHSTAQLG++SVLHSDFPPNPDE
Sbjct:  327 MCRTEVTLQDAVVSVICVETSLHSTAQLGVDSVLHSDFPPNPDE 370          
BLAST of mRNA_H-paniculata_contig24348.6595.1 vs. uniprot
Match: A0A835Z090_9STRA (MCM2/3/5 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z090_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 7.080e-14
Identity = 68/160 (42.50%), Postives = 83/160 (51.88%), Query Frame = 0
Query:    1 MCRTQVTLQDAVVSVICVETSLHSTAQLGMESVLHSDFPPNPDEEFEIQQGLILDRLGLSHFHRPRGPPQPPPLSGETSREHSQT---FREQSLNGSSNNKWAKFGAAAAASRLGLKRPREPMDDWVGGDPQEGGNGV--VGGXXXXNGSGWGDVLVMSQ 155
            M R +V L DAV SV CVETSLHS   LG  SV+HS FP + D +F+++Q LILDRLGL+H         PPP + +  R H Q      ++ + GS      + G     S+LG KRP     D  GGD   GG  V   GG      S W DV  MSQ
Sbjct:  848 MGRGEVALADAVQSVACVETSLHSCNLLGPNSVMHSGFPVDADAQFKMEQRLILDRLGLNHLGG-----DPPPTAPDNGRGHYQGGPGTPQRQVGGSQGGGPQQGGW----SQLG-KRPAADAYDGGGGD---GGRRVRPAGGGR----SAWPDVYRMSQ 990          
BLAST of mRNA_H-paniculata_contig24348.6595.1 vs. uniprot
Match: UPI00109BA4C7 (DNA helicase MCM9 isoform X1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BA4C7)

HSP 1 Score: 73.9 bits (180), Expect = 2.830e-12
Identity = 35/60 (58.33%), Postives = 46/60 (76.67%), Query Frame = 0
Query:    1 MCRTQVTLQDAVVSVICVETSLHSTAQLGMESVLHSDFPPNPDEEFEIQQGLILDRLGLS 60
            MCR +VT+QDA+V+V CVE S+ +TA LG  + LH+ FP +P+EEF+IQ  LIL RL LS
Sbjct:  595 MCRHEVTIQDAIVAVTCVECSMQNTALLGSTNALHTKFPDDPEEEFKIQAELILKRLKLS 654          
BLAST of mRNA_H-paniculata_contig24348.6595.1 vs. uniprot
Match: A0A7S0PCK2_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PCK2_CAFRO)

HSP 1 Score: 70.5 bits (171), Expect = 1.960e-11
Identity = 48/120 (40.00%), Postives = 67/120 (55.83%), Query Frame = 0
Query:    1 MCRTQVTLQDAVVSVICVETSLHSTAQLGMESVLHSDFPPNPDEEFEIQQGLILDRLGLSHFHRPRGPPQPPPLS---GETSREHS-QTFREQSLNGSSNNKWAKFGAAAAASRLGLKRP 116
            MCR +VTLQDAV +V+ VETS+++TA +G +SVL + FP +PD E++ Q+   L +LGLS       PP   P S   G     HS   +        S+++ A    AAA S   L+RP
Sbjct:   98 MCRPEVTLQDAVCTVLLVETSMNTTALVGADSVLRTGFPADPDAEYDRQERDALAQLGLSRLRTAPKPPSDKPRSASPGSAPLPHSGANWGSSQATARSSSRPADPFEAAARSGSSLQRP 217          
BLAST of mRNA_H-paniculata_contig24348.6595.1 vs. uniprot
Match: A0A5A8CLM3_CAFRO (MCM domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CLM3_CAFRO)

HSP 1 Score: 70.5 bits (171), Expect = 4.540e-11
Identity = 48/120 (40.00%), Postives = 67/120 (55.83%), Query Frame = 0
Query:    1 MCRTQVTLQDAVVSVICVETSLHSTAQLGMESVLHSDFPPNPDEEFEIQQGLILDRLGLSHFHRPRGPPQPPPLS---GETSREHS-QTFREQSLNGSSNNKWAKFGAAAAASRLGLKRP 116
            MCR +VTLQDAV +V+ VETS+++TA +G +SVL + FP +PD E++ Q+   L +LGLS       PP   P S   G     HS   +        S+++ A    AAA S   L+RP
Sbjct:  785 MCRPEVTLQDAVCTVLLVETSMNTTALVGADSVLRTGFPADPDAEYDRQERDALAQLGLSRLRTAPKPPSDKPRSASPGSAPLPHSGANWGSSQATARSSSRPADPFEAAARSDSSLQRP 904          
BLAST of mRNA_H-paniculata_contig24348.6595.1 vs. uniprot
Match: A0A812ZUJ1_9DINO (Mcm9 protein n=2 Tax=Sar TaxID=2698737 RepID=A0A812ZUJ1_9DINO)

HSP 1 Score: 70.5 bits (171), Expect = 4.620e-11
Identity = 48/120 (40.00%), Postives = 67/120 (55.83%), Query Frame = 0
Query:    1 MCRTQVTLQDAVVSVICVETSLHSTAQLGMESVLHSDFPPNPDEEFEIQQGLILDRLGLSHFHRPRGPPQPPPLS---GETSREHS-QTFREQSLNGSSNNKWAKFGAAAAASRLGLKRP 116
            MCR +VTLQDAV +V+ VETS+++TA +G +SVL + FP +PD E++ Q+   L +LGLS       PP   P S   G     HS   +        S+++ A    AAA S   L+RP
Sbjct:  693 MCRPEVTLQDAVCTVLLVETSMNTTALVGADSVLRTGFPADPDAEYDRQERDALAQLGLSRLRTAPKPPSDKPRSASPGSAPLPHSGANWGSSQATARSSSRPADPFEAAARSGSSLQRP 812          
BLAST of mRNA_H-paniculata_contig24348.6595.1 vs. uniprot
Match: A0A6P8IIV4_ACTTE (DNA helicase MCM9-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IIV4_ACTTE)

HSP 1 Score: 70.1 bits (170), Expect = 6.230e-11
Identity = 31/60 (51.67%), Postives = 45/60 (75.00%), Query Frame = 0
Query:    1 MCRTQVTLQDAVVSVICVETSLHSTAQLGMESVLHSDFPPNPDEEFEIQQGLILDRLGLS 60
            M R +VT+QDA+V+V C+E S+  TA LG  + LH+ FP +P+EEF++Q  +IL RLGL+
Sbjct:  592 MARKEVTIQDAIVAVTCIECSMQKTALLGSMNALHTKFPDDPEEEFKLQAEIILKRLGLN 651          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24348.6595.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1D8_9PHAE3.100e-2675.00MCM domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G551_ECTSI4.360e-2691.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LM73_ECTSI5.950e-2691.53MCM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JX13_9PHAE9.990e-1793.18MCM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z090_9STRA7.080e-1442.50MCM2/3/5 family-domain-containing protein n=1 Tax=... [more]
UPI00109BA4C72.830e-1258.33DNA helicase MCM9 isoform X1 n=2 Tax=Exaiptasia di... [more]
A0A7S0PCK2_CAFRO1.960e-1140.00Hypothetical protein (Fragment) n=1 Tax=Cafeteria ... [more]
A0A5A8CLM3_CAFRO4.540e-1140.00MCM domain-containing protein n=2 Tax=Cafeteria ro... [more]
A0A812ZUJ1_9DINO4.620e-1140.00Mcm9 protein n=2 Tax=Sar TaxID=2698737 RepID=A0A81... [more]
A0A6P8IIV4_ACTTE6.230e-1151.67DNA helicase MCM9-like n=1 Tax=Actinia tenebrosa T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24348contigH-paniculata_contig24348:1131..3289 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24348.6595.1mRNA_H-paniculata_contig24348.6595.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24348 404..3409 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24348.6595.1 ID=prot_H-paniculata_contig24348.6595.1|Name=mRNA_H-paniculata_contig24348.6595.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=166bp
MCRTQVTLQDAVVSVICVETSLHSTAQLGMESVLHSDFPPNPDEEFEIQQ
GLILDRLGLSHFHRPRGPPQPPPLSGETSREHSQTFREQSLNGSSNNKWA
KFGAAAAASRLGLKRPREPMDDWVGGDPQEGGNGVVGGGGGGNGSGWGDV
LVMSQRPDKTSTPYR*
back to top