prot_H-paniculata_contig24347.6594.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24347.6594.1
Unique Nameprot_H-paniculata_contig24347.6594.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length162
Homology
BLAST of mRNA_H-paniculata_contig24347.6594.1 vs. uniprot
Match: D8LJN0_ECTSI (Serine/Threonine Dehydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN0_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 2.090e-61
Identity = 106/167 (63.47%), Postives = 127/167 (76.05%), Query Frame = 0
Query:    2 TSGLELVEQVRELTNGSDLDAVIVPIGGGGLIGGVTTVVKEMCPGIRVIGAVPKQADDAYKSKLAGEVR------LPETVADGLRINLSDKTWPVVRDDVDEIVAVPEEEIKHWMRVVYERMKLVIEPSAAVGVAVVMSPMMRNRSFNTNGTPPRIGIVLCGGNVDV 162
            T GLELV+QV+E T G+ LDAV+VP+GGGGLI GV T VK +CPGIRVIGA P +A DA++SK +G ++      +P+T+ADGLR  L   TWPVVRD VDEIV V EEEI+ WMRVVYERMKLVIEPSAAVGVA +MSP +R    +      R+G+VLCGGNVDV
Sbjct:  170 TVGLELVQQVKEQTGGAGLDAVVVPVGGGGLITGVATAVKALCPGIRVIGAEPSKAADAFRSKQSGSLQGHDCEGMPDTIADGLRTTLGSTTWPVVRDSVDEIVTVSEEEIRLWMRVVYERMKLVIEPSAAVGVAALMSPRVRGMPQDVK----RVGVVLCGGNVDV 332          
BLAST of mRNA_H-paniculata_contig24347.6594.1 vs. uniprot
Match: D7FHM2_ECTSI (Serine Racemase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHM2_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 3.700e-58
Identity = 103/168 (61.31%), Postives = 126/168 (75.00%), Query Frame = 0
Query:    2 TSGLELVEQVRELTNGSDLDAVIVPIGGGGLIGGVTTVVKEMCPGIRVIGAVPKQADDAYKSKLAGEV-------RLPETVADGLRINLSDKTWPVVRDDVDEIVAVPEEEIKHWMRVVYERMKLVIEPSAAVGVAVVMSPMMRNRSFNTNGTPPRIGIVLCGGNVDV 162
            T GLELV QV++LT G+DLDAVIV IGGGGLI GVTT VK +CP  R+IGA P++A DA+KSK +G +        LP+T+ADGLR +L +K WPVVRD VDEIV V E++I+ WM VVY+RMKLVIEPSAAVGVA +MSP +R           ++G+VLCGGNVDV
Sbjct:  191 TIGLELVSQVKDLTGGADLDAVIVTIGGGGLISGVTTAVKALCPNARIIGAQPEKAADAFKSKQSGTLCSPAEGEALPDTIADGLRTSLGNKAWPVVRDSVDEIVTVSEDDIRVWMGVVYKRMKLVIEPSAAVGVAALMSPQVRAMPSEMR----KVGVVLCGGNVDV 354          
BLAST of mRNA_H-paniculata_contig24347.6594.1 vs. uniprot
Match: A0A2E8JZL7_9PLAN (Serine dehydratase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8JZL7_9PLAN)

HSP 1 Score: 154 bits (389), Expect = 5.970e-43
Identity = 88/166 (53.01%), Postives = 113/166 (68.07%), Query Frame = 0
Query:    2 TSGLELVEQVRELTNGSDLDAVIVPIGGGGLIGGVTTVVKEMCPGIRVIGAVPKQADDAYKSKLAGEVRL-----PETVADGLRINLSDKTWPVVRDDVDEIVAVPEEEIKHWMRVVYERMKLVIEPSAAVGVAVVMSPMMRNRSFNTNGTPPRIGIVLCGGNVDV 162
            T  LEL+ QV       DL AV+VP+GGGG+I GV TV+K + P I VIGA P  ADDA++SK AG ++       +T+ADGLR  L ++T+P++RD VDEI+ V E EI+  +++V ER KLVIEPSAAVGVA  M P +R R F       RIGIVLCGGN+D+
Sbjct:  160 TLALELIAQVP------DLQAVVVPVGGGGMISGVATVMKGLDPDIAVIGAEPALADDAFRSKQAGSIQPHAGDPTQTIADGLRTTLGERTFPIIRDLVDEIIPVKEGEIRAALQLVLERAKLVIEPSAAVGVAAAMQPALRERGFE------RIGIVLCGGNLDL 313          
BLAST of mRNA_H-paniculata_contig24347.6594.1 vs. uniprot
Match: A0A7S2Y2H5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2H5_9STRA)

HSP 1 Score: 152 bits (385), Expect = 3.040e-42
Identity = 82/165 (49.70%), Postives = 109/165 (66.06%), Query Frame = 0
Query:    2 TSGLELVEQVRELTNGSDLDAVIVPIGGGGLIGGVTTVVKEMCPGIRVIGAVPKQADDAYKSKLAGEV----RLPETVADGLRINLSDKTWPVVRDDVDEIVAVPEEEIKHWMRVVYERMKLVIEPSAAVGVAVVMSPMMRNRSFNTNGTPPRIGIVLCGGNVDV 162
            T GLELVEQVRE+T G D+DAV+VP+GGGGL  GV   VK M PG +VIG  P+ A  A  S+ AG +     LP T+ADGLR+++   TWP++RD VD++V V E +I+  +++V  RMKL IEPSAAV +A  +     +          RIG++LCGGNVD+
Sbjct:  178 TVGLELVEQVREMTGGMDMDAVLVPVGGGGLCSGVAVAVKAMSPGTKVIGVEPEMASSAKPSREAGNLISMNSLPNTLADGLRVSVGPITWPIMRDVVDDVVTVSEAQIQDTLKLVVSRMKLAIEPSAAVALAAALY----SEDIKKKEGLHRIGVILCGGNVDM 338          
BLAST of mRNA_H-paniculata_contig24347.6594.1 vs. uniprot
Match: L8GDL9_ACACA (Serine/threonine dehydratase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GDL9_ACACA)

HSP 1 Score: 148 bits (373), Expect = 1.200e-41
Identity = 89/166 (53.61%), Postives = 109/166 (65.66%), Query Frame = 0
Query:    1 STSGLELVEQVRELTNGSDLDAVIVPIGGGGLIGGVTTVVKEMCPGIRVIGAVPKQADDAYKSKLAGEVRLPET----VADGLRINLSDKTWPVVRDDVDEIVAVPEEEIKHWMRVVYERMKLVIEPSAAVGVAVVMSPMMRNRSFNTNGTPPRIGIVLCGGNVDV 162
            +T  LE +EQV      +DLDA+I P+GGGG++ GV    K + PGI+V GA PK ADDAY+SK AGE+ LP+T    +ADGLR  L   TWPVVRD VD I  V EEEIK  MR+V+ERMKLV+EPS AV +A V+S   R      N    RI +V  GGNVD+
Sbjct:   78 ATIALEALEQV------ADLDAIITPVGGGGMMSGVAIAAKALKPGIKVFGAEPKDADDAYRSKEAGEL-LPQTGTSTIADGLRTGLGSLTWPVVRDLVDAIYTVSEEEIKAAMRLVWERMKLVVEPSGAVSLAAVLSEDFRK----ANPDVRRICVVFSGGNVDL 232          
BLAST of mRNA_H-paniculata_contig24347.6594.1 vs. uniprot
Match: A0A2E3Q501_9BACT (Serine dehydratase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E3Q501_9BACT)

HSP 1 Score: 150 bits (379), Expect = 1.370e-41
Identity = 87/166 (52.41%), Postives = 109/166 (65.66%), Query Frame = 0
Query:    2 TSGLELVEQVRELTNGSDLDAVIVPIGGGGLIGGVTTVVKEMCPGIRVIGAVPKQADDAYKSKLAGEVRL-----PETVADGLRINLSDKTWPVVRDDVDEIVAVPEEEIKHWMRVVYERMKLVIEPSAAVGVAVVMSPMMRNRSFNTNGTPPRIGIVLCGGNVDV 162
            T  LEL+ QV       DL AV+VP+GGGG+I GV TV+K M  GI VIGA P  ADDA +SK  G ++        T+ADGLR  L ++T+P++RD VDEIV V E+ I+  +R+V ER KLVIEPSAAVG+AV M P  R R         RIG+VLCGGN+D+
Sbjct:  160 TLALELIAQVP------DLQAVVVPVGGGGMISGVATVMKGMDAGITVIGAEPSLADDACRSKQTGSIQPHLGDPTATIADGLRTTLGERTFPIIRDLVDEIVTVQEDHIRAALRLVLERSKLVIEPSAAVGIAVAMQPAFRERGLE------RIGVVLCGGNLDL 313          
BLAST of mRNA_H-paniculata_contig24347.6594.1 vs. uniprot
Match: A0A507C1P8_9FUNG (PALP domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507C1P8_9FUNG)

HSP 1 Score: 148 bits (374), Expect = 1.370e-40
Identity = 82/165 (49.70%), Postives = 111/165 (67.27%), Query Frame = 0
Query:    2 TSGLELVEQVRELTNGSDLDAVIVPIGGGGLIGGVTTVVKEMCPGIRVIGAVPKQADDAYKSKLAGEV---RLPETVADGLRINLSDKTWPVVRDDVDEIVAVPEEEIKHWMRVVYERMKLVIEPSAAVGVAVVM-SPMMRNRSFNTNGTPPRIGIVLCGGNVDV 162
            T  LE ++Q +++  G  LDA++VPIGGGG+I G+    K + P +R+IGA PK ADDAY+S  AG++     P T+ADGL  +L   T+P++RD VDEI+ V E EI   M++V+ERMKLVIEPSAAVGVAVV+  P  R            +G+VLCGGN+D+
Sbjct:  183 TLALEFIKQAKDM--GVPLDAIVVPIGGGGMISGICIAAKGLDPNLRIIGAEPKGADDAYRSMQAGQLIPQTAPNTIADGLLTSLGSLTYPIIRDHVDEIITVEETEIVQAMKLVFERMKLVIEPSAAVGVAVVLYRPEFRRLGVKN------VGVVLCGGNLDL 339          
BLAST of mRNA_H-paniculata_contig24347.6594.1 vs. uniprot
Match: A0A401RT17_CHIPU (L-serine ammonia-lyase n=1 Tax=Chiloscyllium punctatum TaxID=137246 RepID=A0A401RT17_CHIPU)

HSP 1 Score: 147 bits (370), Expect = 3.530e-40
Identity = 76/165 (46.06%), Postives = 112/165 (67.88%), Query Frame = 0
Query:    2 TSGLELVEQVRELTNGSDLDAVIVPIGGGGLIGGVTTVVKEMCPGIRVIGAVPKQADDAYKSKLAGEVR----LPETVADGLRINLSDKTWPVVRDDVDEIVAVPEEEIKHWMRVVYERMKLVIEPSAAVGVAVVMSPMMRNRSFNTNGTPPRIGIVLCGGNVDV 162
            T GLE+++QV       D+ AV+VP+GGGG++ G+T  +K   P ++V  A P++ADD Y+SK +G +      P T+ADG++ ++ +KTWP++RD VD++  V EEEIK   R+++ER KLVIEP+A VG+AVV+SP  RN   N       + +VLCGGNVD+
Sbjct:  166 TIGLEILQQVP------DVQAVVVPVGGGGMVSGITVAIKTQRPQVKVYAAEPEKADDCYQSKQSGCLTPNRYAPVTIADGVKTSIGEKTWPIIRDLVDDVFTVSEEEIKRATRLMWERAKLVIEPTAGVGIAVVLSPRFRNLPGNLRN----VCVVLCGGNVDL 320          
BLAST of mRNA_H-paniculata_contig24347.6594.1 vs. uniprot
Match: UPI001CB7CD7A (serine racemase-like isoform X2 n=2 Tax=Chiloscyllium plagiosum TaxID=36176 RepID=UPI001CB7CD7A)

HSP 1 Score: 144 bits (364), Expect = 4.060e-40
Identity = 75/165 (45.45%), Postives = 111/165 (67.27%), Query Frame = 0
Query:    2 TSGLELVEQVRELTNGSDLDAVIVPIGGGGLIGGVTTVVKEMCPGIRVIGAVPKQADDAYKSKLAGEVR----LPETVADGLRINLSDKTWPVVRDDVDEIVAVPEEEIKHWMRVVYERMKLVIEPSAAVGVAVVMSPMMRNRSFNTNGTPPRIGIVLCGGNVDV 162
            T GLE+++QV       D+ AV+VP+GGGG++ G+T  +K   P +++  A P++ADD Y+SK  G +      P T+ADG++ ++ +KTWP++RD VD++  V EEEIK   R+++ER KLVIEP+A VGVAVV+SP  R+   N       + +VLCGGNVD+
Sbjct:   88 TIGLEILQQVP------DVQAVVVPVGGGGMVSGITVAIKTQRPQVKIYAAEPEKADDCYQSKQCGCLTPNKYAPVTIADGVKTSIGEKTWPIIRDLVDDVFTVSEEEIKRATRLMWERAKLVIEPTAGVGVAVVLSPRFRDLPGNLRN----VCVVLCGGNVDL 242          
BLAST of mRNA_H-paniculata_contig24347.6594.1 vs. uniprot
Match: A0A2D5E2J8_9BACT (Serine dehydratase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2D5E2J8_9BACT)

HSP 1 Score: 146 bits (369), Expect = 4.230e-40
Identity = 86/166 (51.81%), Postives = 111/166 (66.87%), Query Frame = 0
Query:    2 TSGLELVEQVRELTNGSDLDAVIVPIGGGGLIGGVTTVVKEMCPGIRVIGAVPKQADDAYKSKLAGEVRL-----PETVADGLRINLSDKTWPVVRDDVDEIVAVPEEEIKHWMRVVYERMKLVIEPSAAVGVAVVMSPMMRNRSFNTNGTPPRIGIVLCGGNVDV 162
            T  LEL+ QV       DL+AV+VPIGGGGLI GV TVVK + P IRVIGA P   DDA +SK+AG ++       +T+ADGLR  L ++T+P++ + VDEIV V E  I+  +R+V ER KLVIEPSAAVGVAV +    + R+        RIG+VLCGGN+D+
Sbjct:  160 TLALELLGQVP------DLEAVVVPIGGGGLISGVATVVKSLAPSIRVIGAEPALVDDAARSKVAGSIQPHHGDPTKTIADGLRTTLGERTFPIIEELVDEIVTVEETAIRASLRLVLERSKLVIEPSAAVGVAVAIDSTFKARAHR------RIGVVLCGGNLDL 313          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24347.6594.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJN0_ECTSI2.090e-6163.47Serine/Threonine Dehydratase n=2 Tax=Ectocarpus Ta... [more]
D7FHM2_ECTSI3.700e-5861.31Serine Racemase n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
A0A2E8JZL7_9PLAN5.970e-4353.01Serine dehydratase n=1 Tax=Planctomycetaceae bacte... [more]
A0A7S2Y2H5_9STRA3.040e-4249.70Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
L8GDL9_ACACA1.200e-4153.61Serine/threonine dehydratase n=1 Tax=Acanthamoeba ... [more]
A0A2E3Q501_9BACT1.370e-4152.41Serine dehydratase n=1 Tax=Phycisphaerae bacterium... [more]
A0A507C1P8_9FUNG1.370e-4049.70PALP domain-containing protein n=1 Tax=Synchytrium... [more]
A0A401RT17_CHIPU3.530e-4046.06L-serine ammonia-lyase n=1 Tax=Chiloscyllium punct... [more]
UPI001CB7CD7A4.060e-4045.45serine racemase-like isoform X2 n=2 Tax=Chiloscyll... [more]
A0A2D5E2J8_9BACT4.230e-4051.81Serine dehydratase n=1 Tax=Phycisphaerae bacterium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1100coord: 2..161
e-value: 1.0E-43
score: 151.6
NoneNo IPR availablePANTHERPTHR43050SERINE / THREONINE RACEMASE FAMILY MEMBERcoord: 2..162
IPR001926Pyridoxal-phosphate dependent enzymePFAMPF00291PALPcoord: 2..139
e-value: 1.7E-28
score: 99.9
IPR036052Tryptophan synthase beta subunit-like PLP-dependent enzymeSUPERFAMILY53686Tryptophan synthase beta subunit-like PLP-dependent enzymescoord: 2..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24347contigH-paniculata_contig24347:596..1739 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24347.6594.1mRNA_H-paniculata_contig24347.6594.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24347 596..1739 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24347.6594.1 ID=prot_H-paniculata_contig24347.6594.1|Name=mRNA_H-paniculata_contig24347.6594.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=162bp
STSGLELVEQVRELTNGSDLDAVIVPIGGGGLIGGVTTVVKEMCPGIRVI
GAVPKQADDAYKSKLAGEVRLPETVADGLRINLSDKTWPVVRDDVDEIVA
VPEEEIKHWMRVVYERMKLVIEPSAAVGVAVVMSPMMRNRSFNTNGTPPR
IGIVLCGGNVDV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001926PLP-dep
IPR036052Trypto_synt_PLP_dependent