mRNA_H-paniculata_contig24322.6591.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig24322.6591.1 vs. uniprot
Match: D7G7V9_ECTSI (Selenoprotein O n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7V9_ECTSI) HSP 1 Score: 466 bits (1200), Expect = 1.380e-154 Identity = 258/434 (59.45%), Postives = 306/434 (70.51%), Query Frame = 1
Query: 1 IQLKGIGKTPFSRGGDGKAVLGACLKEYLYSEAFNGLGIGAAVVVSVCATGEAALIRDPDPKNSGALMRTPGAVLCRIAPSFLRFGSFELPARRGEVAVVRCLADYCLRHLRPYLMSLDQEVDSSVRTSPSLGKQEKRAASLENDALNSPQAVESGESAIGSDQLKHSYMKGNIEGRKEPREEYMELLVSFVQVTARMVAEWQALGFCHGVLNTDNFTLLGLGLDFGHCSFMEDYVPSWSPNEGDSALRYTFQNQPDVAAWNCERLAEAFSSLVGQSGIAEANDAFLPAFDAAYTFRMQRKLGLEGMDLGNDWAAALRSGSAERHQGTHATLSWDAVFLLDLLRLMANCRTDFTDTWRALIDVPGSSEALKSRNSSELDSDSVGAGESHEDMEVWDDECLQPLAAVLARAKPSQKQRQQWAQWIRQYMARIDSQ 1302
IQLKGIG+TPFSRGGDGKAVLGACL+E+L+SEAF GLG+ AAV VSVC++GE+A IRD DPKN G R GAVLCR APSFLRFGSFELPARRG+V +VR LADYCLRHL P+ S S + + G + R L + E G+ A G+ + + M R +Y+ELLV+ VQ TARMVA WQA+GFCHGVLNTDNFTLLGLGLDFG CSFME Y P+WSPNEGDSALRY F+NQPDV+AWNCERLAEAFS +VG SG+AEAN AF PAFDAAYT +Q+KLGL GMDLG+ W RSG A + L DA F+L LMA CRTDFT+TWRAL+DVP S A K+R + L ++ + A +D+ D+E L+PL++VL A S R+QWA WIR Y +RIDSQ
Sbjct: 253 IQLKGIGQTPFSRGGDGKAVLGACLREFLFSEAFLGLGLPAAVAVSVCSSGESATIRDSDPKNGGTFKRARGAVLCRTAPSFLRFGSFELPARRGDVTLVRKLADYCLRHLSPHFES------SLLAHATGSGDERTREFLTSGKDLGIGRNEEDGQ-AQGNGKESNQEMGA--------RNDYVELLVAIVQATARMVAGWQAMGFCHGVLNTDNFTLLGLGLDFGPCSFMEAYDPTWSPNEGDSALRYAFRNQPDVSAWNCERLAEAFSPIVGVSGVAEANAAFSPAFDAAYTVHLQKKLGLSGMDLGSGWIHPRRSGDAPAGE-MQEKLPPDAQFVLSFFDLMAACRTDFTETWRALLDVPALSVARKARRN--LTTEHLEATGVEDDICNDDEETLRPLSSVLNAAGASSTARKQWATWIRDYSSRIDSQ 668
BLAST of mRNA_H-paniculata_contig24322.6591.1 vs. uniprot
Match: A0A1Y1IEC0_KLENI (Selenoprotein O n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IEC0_KLENI) HSP 1 Score: 197 bits (500), Expect = 2.110e-52 Identity = 147/438 (33.56%), Postives = 207/438 (47.26%), Query Frame = 1
Query: 1 IQLKGIGKTPFSRGGDGKAVLGACLKEYLYSEAFNGLGIGAAVVVSVCATGEAA---LIRDPDPKNSGALMRTPGAVLCRIAPSFLRFGSFELPARRGEVA--VVRCLADYCLRHLRPYLMSLDQEVDSSVRTSPSLGKQEKRAASLENDALNSPQAVESGESAIGSDQLKHSYMKGNIEGRKEPREEYMELLVSFVQVTARMVAEWQALGFCHGVLNTDNFTLLGLGLDFGHCSFMEDYVPSWSPNEGDSALRYTFQNQPDVAAWNCERLAEAF--SSLVGQSGIAEANDAFLPAFDAAYTFRMQRKLGLEGMDLGNDWAAALRSGSAERHQGTHATLSWDAVFLLDLLRLMANCRTDFTDTWRALIDVPGSSEALKSRNSSELDSDSVGAGESHEDMEVWDDECLQPLAAVLARAKPSQKQRQQWAQWIRQYMARI 1293
+QLKG GKTP+SR DG+AVL + ++E+L SE +GLG+ +++ TG + D DPK PGAV+CRIAPSF+RFG+F+LPA RGE +V+ LADY ++H P+L +R + E DA +A SGE A Y K Y L + TAR+ A+WQ +GF HGVLNTDN ++LGL +D+G +F++ + ++PN D RY F NQPDV WN +LA AF L+ E A+ AF Y M K+GL +DA + +LM DFT+ +RAL DV + L +++SE +E L PL VL R++ +R WA W+R Y+ ++
Sbjct: 227 LQLKGAGKTPYSRHADGQAVLRSSVREFLCSETMHGLGVPTTRALTLVTTGRGVWRDMFYDGDPKQE------PGAVVCRIAPSFVRFGTFQLPASRGEAERPLVKQLADYVIKHHYPHL---------------------ERGEAAERDA--GAEASSSGEGAPAG-----GYNK------------YGALFKEVAERTARLAAKWQGVGFAHGVLNTDNMSILGLTIDYGPFAFVDAFDDQFTPNTSDPTRRYAFGNQPDVILWNMVQLANAFIEGELLTTPEAQELLPAYPLAFGTEYRALMAAKMGLP---------------------------EYDADLTTTMFQLMKRDSVDFTNHFRALGDV---TTGLDEQSASE-------------------EELLAPLEGVLGRSE----KRSDWADWMRAYLGKL 565
BLAST of mRNA_H-paniculata_contig24322.6591.1 vs. uniprot
Match: A0A388K0J0_CHABU (Selenoprotein O n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K0J0_CHABU) HSP 1 Score: 193 bits (490), Expect = 5.090e-50 Identity = 144/440 (32.73%), Postives = 216/440 (49.09%), Query Frame = 1
Query: 1 IQLKGIGKTPFSRGGDGKAVLGACLKEYLYSEAFNGLGIGAAVVVSVCATGEAALIRDPDPKNSGALMRTPGAVLCRIAPSFLRFGSFELPARRG--EVAVVRCLADYCLRHLRPYLMSLDQEVDSSVRTSPSLGKQEKRAASLENDALNSPQAVESGESAIGSDQLKHSYMKGNIEGRKEPREEYMELLVSFVQVTARMVAEWQALGFCHGVLNTDNFTLLGLGLDFGHCSFMEDYVPSWSPNEGD-SALRYTFQNQPDVAAWNCERL------AEAFSSLVGQSGIAEANDAFLPAFDAAYTFRMQRKLGLEGMDLGNDWAAALRSGSAERHQGTHATLSWDAVFLLDLLRLMANCRTDFTDTWRALIDVPGSSEALKSRNSSELDSDSVGAGESHEDMEVWDDECLQPLAAVLARAKPSQKQRQQWAQWIRQYMARI 1293
+QLKG GKTP+SR DG AVL + ++E++ SEA LG+ +S+ ATGE D G + R PGAV+CR+APSF+RFG+F++ A RG + +V+ +ADY +++ P L SS +S G + +A + + A SD+ +Y K Y LLV + TA+MVA+WQA+GF HGVLNTDN ++LGL +D+G F+E + P ++PN D RY FQNQPD+ WN + AE ++ + G+A + FL Y M +KLG++ +D + DLL LMA + DFT+ +RAL V S+E GES + ++ L PL VL + ++Q + W +W+ +Y +++
Sbjct: 430 LQLKGAGKTPYSRFADGMAVLRSSIREFVCSEAMFHLGVPTTRALSLVATGEGVF---RDMFYDGNVRREPGAVVCRMAPSFVRFGTFQIHAARGGEDNILVQRIADYVIKYHFPQLEKKGASTASSSSSSCKEGAENGASAEIHD--------------ASSSDESGKTYNK------------YAALLVEVAERTAKMVAKWQAVGFTHGVLNTDNMSILGLTIDYGPFGFLEAFDPKYTPNTTDLPGRRYCFQNQPDICLWNIVQFVNALLSAELLTTKEAEEGVARYAETFLQD----YGLIMAQKLGIK---------------------------QYDKQMVSDLLALMAADKVDFTNFFRALGKVKVSAEP----------------GESGDGTDI-----LSPLEPVLGKELNEERQGK-WKEWMHRYRSQL 787
BLAST of mRNA_H-paniculata_contig24322.6591.1 vs. uniprot
Match: A0A5C5UC11_9GAMM (Protein adenylyltransferase SelO n=1 Tax=Luteimonas marina TaxID=488485 RepID=A0A5C5UC11_9GAMM) HSP 1 Score: 186 bits (472), Expect = 3.180e-49 Identity = 140/411 (34.06%), Postives = 199/411 (48.42%), Query Frame = 1
Query: 1 IQLKGIGKTPFSRGGDGKAVLGACLKEYLYSEAFNGLGIGAAVVVSVCATGEAALIRDPDPKNSGALMRTPGAVLCRIAPSFLRFGSFELPARRGEVAVVRCLADYCLRHLRPYLMSLDQEVDSSVRTSPSLGKQEKRAASLENDALNSPQAVESGESAIGSDQLKHSYMKGNIEGRKEPREEYMELLVSFVQVTARMVAEWQALGFCHGVLNTDNFTLLGLGLDFGHCSFMEDYVPSWSPNEGDSA-LRYTFQNQPDVAAWNCERLAEAFSSLVGQSGIAEAN-DAFLPAFDAAYTFRMQRKLGLEGMDLGNDWAAALRSGSAERHQGTHATLSWDAVFLLDLLRLMANCRTDFTDTWRALIDVPGSSEALKSRNSSELDSDSVGAGESHEDMEVWDDECLQPLAAVLAR 1227
+QLKG G TP+SR DG+AVL + ++E+L SEA + LG+ +S+ ATGE L D G PGA++CR+APSFLRFG FELP RG+V ++R LAD+C+ P+L+ ++ A+L+ + D G+ + R Y E + TAR+VA W +GF HGVLNTDN ++LGL +D+G +++DY P W+PN D+ RY F QP +A WN RLA+A S L G + +A D + + AY + RKLGL A R ER + H LM + D T +RAL +V + +L++ + D D++ GE E W L+ A LAR
Sbjct: 123 LQLKGAGLTPYSRSADGRAVLRSSIREFLCSEAMHHLGVPTTRALSLVATGERVL---RDMFYDGRPRAEPGAIVCRVAPSFLRFGHFELPYSRGDVELLRQLADFCIWRDFPHLLG------------------DRAGATLD---------------GLRGD--------GSFDERL-----YGEWFAEVCERTARLVAGWMRVGFVHGVLNTDNMSILGLSIDYGPYGWIDDYDPDWTPNTTDAGGRRYRFGWQPRIAHWNLMRLAQALSPLFGDATPLQAGLDRYAAEYTRAYRDSVARKLGL----------AECRDDDVERMKALHG--------------LMQAAQVDMTLFFRALAEVDSGNPSLEAMRDAFYD-DAL-RGEHGEAFTAW----LRDYALRLAR 454
BLAST of mRNA_H-paniculata_contig24322.6591.1 vs. uniprot
Match: A0A0U9HMB9_KLENI (Selenoprotein O n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HMB9_KLENI) HSP 1 Score: 186 bits (473), Expect = 3.740e-49 Identity = 146/442 (33.03%), Postives = 203/442 (45.93%), Query Frame = 1
Query: 1 IQLKGIGKTPFSRGGDGKAVLGACLKEYLYSEAFNGLGIGAAVVVSVCATGEAALIRDPDPKNSGALMRTPGAVLCRIAPSFLRFGSFELPARRG--EVAVVRCLADYCLRHLRPYLMSLDQEVDSSVRTSPSLGKQEKRAASLENDALNSPQAVESGESAIGSDQLKHSYMKGNIEGRKEPREEYMELLVSFVQVTARMVAEWQALGFCHGVLNTDNFTLLGLGLDFGHCSFMEDYVPSWSPNEGDSALRYTFQNQPDVAAWNCERLAEAFSSLVGQSGIAEANDA------FLPAFDAAYTFRMQRKLGLEGMDLGNDWAAALRSGSAERHQGTHATLSWDAVFLLDLLRLMANCRTDFTDTWRALIDVPGSSEALKSRNSSELDSDSVGAGESHEDMEVWDDECLQPLAAVLARAKPSQKQRQQWAQWIRQYMARIDSQ 1302
+QLKG G+TP+SR DG+AVL + L+E+L SEA +GLG+ +++ TG D G PGAV+CR+APSF+RFG+F+LPA RG E +V+ LADY + H P L + G + +R Q E+ S I + EG EY L + T R+VA WQA+GF HGVLNTDN ++LGL LD+G +F++ Y ++PN D RY F QPDV WN +LA AF + G+ A +A F F Y+ RM KLG+ ++D F LL LM + DFT+ +RAL V + G GE E ++ L+ + VL P + WAQW+R Y+ ++ Q
Sbjct: 140 LQLKGAGRTPYSRSADGQAVLRSSLREFLCSEAMHGLGVPTTRALTLVGTGTGV---HRDMFYDGHPNLEPGAVVCRMAPSFVRFGTFQLPAERGGKETKLVKFLADYMIEHHFPKLKT---------------GLENRRG-----------QVAEAEMSGIDGE-----------EGVSGKYNEYAALFKEVAERTGRLVAYWQAVGFVHGVLNTDNMSILGLTLDYGPFAFLDAYSDQFTPNTSDPTGRYAFGIQPDVVLWNMVQLANAFFA----GGLLTAAEARALMAVFPQTFGVEYSHRMAAKLGMA---------------------------TFDGDFTTALLALMKRDKVDFTNLFRALSGVT-----------------TEGPGE-----EGTEEGLLRSVEGVL----PEGSVKGDWAQWMRIYIVKLKKQ 484
BLAST of mRNA_H-paniculata_contig24322.6591.1 vs. uniprot
Match: A0A087SCV4_AUXPR (Selenoprotein O n=4 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SCV4_AUXPR) HSP 1 Score: 184 bits (467), Expect = 2.320e-48 Identity = 130/371 (35.04%), Postives = 182/371 (49.06%), Query Frame = 1
Query: 1 IQLKGIGKTPFSRGGDGKAVLGACLKEYLYSEAFNGLGIGAAVVVSVCATGEAALIRDPDPKNSGALMRTPGAVLCRIAPSFLRFGSFELPARRG--EVAVVRCLADYCLRHLRPYLMSLDQEVDSSVRTSPSLGKQEKRAASLENDALNSPQAVESGESAIGSDQLKHSYMKGNIEGRKEPREEYMELLVSFVQVTARMVAEWQALGFCHGVLNTDNFTLLGLGLDFGHCSFMEDYVPSWSPNEGD-SALRYTFQNQPDVAAWNCERLAEAF--SSLVGQSGIAEANDAFLPAFDAAYTFRMQRKLGLEGMDLGNDWAAALRSGSAERHQGTHATLSWDAVFLLDLLRLMANCRTDFTDTWRALIDV-PG 1095
+QLKG GKTPFSR DG+AVL + L+EY+ SEA LG+ +S+ ATG A + RD G + PGAV+CR+A SF+RFG+F+LP+ RG ++ +VR +AD+ +R P+L + EV + G A G D G P +Y+ L + TA V W +GF HGVLNTDN ++LG +D+G +FME + P+++PN D RY F+ QP + +N L +AF + L+ G+ E D+F A A++ M+RKLGL D G DL+ LM + DFT+TWRAL V PG
Sbjct: 140 LQLKGAGKTPFSRMADGRAVLRSSLREYVASEAMAALGVPTTRALSLVATG-AGIYRDMF--YDGDVKEEPGAVVCRVARSFVRFGTFQLPSARGGEQLGLVRRVADHVIRRHYPHLNGDNGEVSA-------------------------------GNGAAGED------------GAASPDPKYLRFLKEVAERTAATVVHWHRVGFVHGVLNTDNMSILGDTIDYGPYAFMERFDPNYTPNTTDLPGRRYAFRAQPAICQFNVLMLGKAFVLAGLLDGEGLQEVVDSFTVALSGAFSDAMRRKLGLRDFDPG---------------------------LYGDLMALMIQDKPDFTNTWRALSSVAPG 437
BLAST of mRNA_H-paniculata_contig24322.6591.1 vs. uniprot
Match: A0A8J4EXV3_9CHLO (Selenoprotein O n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4EXV3_9CHLO) HSP 1 Score: 184 bits (466), Expect = 1.720e-47 Identity = 143/444 (32.21%), Postives = 200/444 (45.05%), Query Frame = 1
Query: 1 IQLKGIGKTPFSRGGDGKAVLGACLKEYLYSEAFNGLGIGAAVVVSVCATGEAALIRDPDPKNSGALMRTPGAVLCRIAPSFLRFGSFELPARRG--EVAVVRCLADYCLRHLRPYLMSLDQEVDSSVRTSPSLGKQEKRAASLENDALNSPQAVESGESAIGSDQLKHSYMKGNIEGRKEPREEYMELLVSFVQVTARMVAEWQALGFCHGVLNTDNFTLLGLGLDFGHCSFMEDYVPSWSPNEGD-SALRYTFQNQPDVAAWNCERLAEAF--SSLVGQSGIAEANDAFLPAFDAAYTFRMQRKLGLEGMDLGNDWAAALRSGSAERHQGTHATLSWDAVFLLDLLRLMANCRTDFTDTWRALIDVPGSSEALK-------SRNSSELDSDSVGAGESHEDMEVWDDECLQPLAAVLARAKPSQKQR-QQWAQWIRQYMARI 1293
+QLKG GKTP+SR DG+AVL + L+EY+ SEA LG+ +S+ TGE L D +G PGAV+CR+APSF+RFGSF+LP RG EV +V+ AD+ +++ P L + SPQ Y+ LL V T R+VA+WQALGF HGVLNTDN ++LGL +D+G F++ + P W+PN D S RY+++NQP+ +N LA A + LV + G E + Y RM KLGL+ +D +L+RLM + DFT+T+RAL V E + S + S S SVG + L+A L +P +R W QW++ Y A++
Sbjct: 251 LQLKGAGKTPYSRRADGRAVLRSSLREYVCSEAMAALGVPTTRALSLVGTGEPVL---RDMFYNGNARWEPGAVVCRVAPSFVRFGSFQLPVSRGAGEVGLVKLAADWVVKYHYPELAA-------------------------------SPQP-------------------------------YLALLREVVHRTGRLVADWQALGFVHGVLNTDNMSILGLTIDYGPFGFLDKFDPDWTPNLTDASGRRYSYRNQPEAVQFNLIMLANALLAADLVSREGAEETLGEYSKVLSETYNARMAAKLGLK---------------------------EYDRALSHELMRLMYDDDADFTNTFRALCSVSSVEEEEEQQFQPDTSESVSRSGSGSVGLTAA--------------LSASLNGGQPLSSERLAAWRQWLQAYRAKL 588
BLAST of mRNA_H-paniculata_contig24322.6591.1 vs. uniprot
Match: A0A0C2DH36_9DELT (Protein adenylyltransferase SelO n=3 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A0C2DH36_9DELT) HSP 1 Score: 181 bits (460), Expect = 1.860e-47 Identity = 141/440 (32.05%), Postives = 193/440 (43.86%), Query Frame = 1
Query: 1 IQLKGIGKTPFSRGGDGKAVLGACLKEYLYSEAFNGLGIGAAVVVSVCATGEAALIRDPDPKNSGALMRTPGAVLCRIAPSFLRFGSFELPARRGEVAVVRCLADYCLRHLRPYLMSLDQEVDSSVRTSPSLGKQEKRAASLENDALNSPQAVESGESAIGSDQLKHSYMKGNIEGRKEPREEYMELLVSFVQVTARMVAEWQALGFCHGVLNTDNFTLLGLGLDFGHCSFMEDYVPSWSPNEGDSA-LRYTFQNQPDVAAWNCERLAEAFSSLVGQ-SGIAEANDAFLPAFDAAYTFRMQRKLGLEGMDLGNDWAAALRSGSAERHQGTHATLSWDAVFLLDLLRLMANCRTDFTDTWRALIDVPGSSEALKSRNSSELDSDSVGAGESHEDMEVWDDECLQPLAAVLARAKPSQ---KQRQQWAQWIRQYMARIDSQA 1305
+QLKG G TP+SR GDG+AVL + ++E+L SEA + LG+ +S+ TG+ ++RD G PGA++CR+APSFLRFG+FELP RGE ++R LADY + P L+S + S+ S Y Q TA MVAEW +GF HGV+NTDN ++LGL +D+G ++++Y P W+PN D+A RY F NQP +A WN + A A LVG + AF KLGLE G++ RSG + +Q +R++ + TD T +RAL DVP + A DDE L PL A A PS R W+RQ R+ +A
Sbjct: 122 LQLKGAGPTPYSRRGDGRAVLRSSVREFLCSEAMHHLGVPTTRALSLVGTGDE-VVRDMF--YDGNAKPEPGAIVCRVAPSFLRFGNFELPMARGEHELLRQLADYAITTHFPELLSQANDAGQSISAST-----------------------------------------------------YAAWFTQVCQRTATMVAEWMRVGFVHGVMNTDNMSVLGLTIDYGPYGWIDNYDPDWTPNTTDAAGRRYRFGNQPRIAMWNLVKFANALHPLVGSVEPFEDGMRAFSDTLGQHTLASFAAKLGLEPF-AGDEDPEDPRSGVSLANQS---------------MRVLGSTPTDMTIFYRALADVPVQANAS-------------------------DDELLAPLWAAYYEADPSTITPATRSLTLAWLRQLGERVRGEA 464
BLAST of mRNA_H-paniculata_contig24322.6591.1 vs. uniprot
Match: A0A545SGZ0_9GAMM (Protein adenylyltransferase SelO n=1 Tax=Halothiobacillaceae bacterium TaxID=2268194 RepID=A0A545SGZ0_9GAMM) HSP 1 Score: 180 bits (457), Expect = 3.830e-47 Identity = 127/366 (34.70%), Postives = 174/366 (47.54%), Query Frame = 1
Query: 1 IQLKGIGKTPFSRGGDGKAVLGACLKEYLYSEAFNGLGIGAAVVVSVCATGEAALIRDPDPKNSGALMRTPGAVLCRIAPSFLRFGSFELPARRGEVAVVRCLADYCLRHLRPYLMSLDQEVDSSVRTSPSLGKQEKRAASLENDALNSPQAVESGESAIGSDQLKHSYMKGNIEGRKEPREEYMELLVSFVQVTARMVAEWQALGFCHGVLNTDNFTLLGLGLDFGHCSFMEDYVPSWSPNEGDS-ALRYTFQNQPDVAAWNCERLAEAFSSLVGQ-SGIAEANDAFLPAFDAAYTFRMQRKLGLEGMDLGNDWAAALRSGSAERHQGTHATLSWDAVFLLDLLRLMANCRTDFTDTWRALIDVP 1092
+QLKG G TP++R DG+AVL + L+E+L SEA + LGI +S+ ATG+A L D +G + PGAV+CR+APSF RFG FE+ A R + A++R LAD+ LRH P L P E+ Y+ L + + TA MVA W +GF HGV+NTDN ++LGL +D+G ++EDY P W+PN D+ RY + QP+VA WN RLAEA LVG + EA + A+ + + KLG W A H+G D DLL +M + D+T +R LID+P
Sbjct: 125 LQLKGAGPTPYARSADGRAVLRSSLREFLCSEAMHHLGIPTTRALSLVATGDAVL---RDMLYTGDMRPEPGAVVCRVAPSFTRFGHFEIHAARKDHALLRQLADHTLRHDYPEL---------------------------------GPPGTEA----------------------------YLALFRAVCRRTAVMVAHWMRVGFVHGVMNTDNMSILGLTIDYGPYGWLEDYDPDWTPNTTDARGRRYAYARQPEVAGWNLARLAEALIPLVGTVEPLQEAMAVYGEAYATTWRGMLAAKLG---------WKA---------HRGAE-----DDRLFEDLLEIMRRAQCDWTILFRTLIDLP 403
BLAST of mRNA_H-paniculata_contig24322.6591.1 vs. uniprot
Match: UPI0019AC59FC (UPF0061 protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=UPI0019AC59FC) HSP 1 Score: 179 bits (455), Expect = 6.170e-47 Identity = 128/364 (35.16%), Postives = 175/364 (48.08%), Query Frame = 1
Query: 1 IQLKGIGKTPFSRGGDGKAVLGACLKEYLYSEAFNGLGIGAAVVVSVCATGEAALIRDPDPKNSGALMRTPGAVLCRIAPSFLRFGSFELPARRGEVAVVRCLADYCLRHLRPYLMSLDQEVDSSVRTSPSLGKQEKRAASLENDALNSPQAVESGESAIGSDQLKHSYMKGNIEGRKEPREEYMELLVSFVQVTARMVAEWQALGFCHGVLNTDNFTLLGLGLDFGHCSFMEDYVPSWSPNEGDS-ALRYTFQNQPDVAAWNCERLAEAFSSLVGQSGIAEANDAFLPAFDAAYTFRMQRKLGLEGMDLGNDWAAALRSGSAERHQGTHATLSWDAVFLLDLLRLMANCRTDFTDTWRALIDV 1089
+QLKG G+TP+SRG DG+AVL + ++E+L SEA + LG+ +S+ ATGEA ++RD G PGA++CR+APSF+RFGSFELPA RG+ A++R LAD+ + P ++GR P Y + TA +VA W +GF HGV+NTDN ++LGL +D+G +++DY P W+PN D+ RY F QP VA WN RLA+A S L AE +A L F A Y +R D AA L G AE +G D +L LM D T T+R+L++V
Sbjct: 121 LQLKGAGRTPYSRGADGRAVLRSSIREFLCSEAMHHLGVPTTRALSLVATGEA-VVRDMF--YDGHPRAEPGAIVCRVAPSFVRFGSFELPASRGDAALLRRLADFTISRDFP-----------------------------------------------------------GLQGRDGPG--YAAWFAQVCERTAELVAHWMRVGFVHGVMNTDNMSILGLTIDYGPYGWVDDYDPDWTPNTTDAQGRRYRFGTQPQVAYWNLGRLAQALSPLFAD---AEPLNAGLERFRATYLACQRR-----------DTAAKL--GLAECREG-------DLELAGELYALMQRAEMDMTLTFRSLVEV 397 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24322.6591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig24322.6591.1 >prot_H-paniculata_contig24322.6591.1 ID=prot_H-paniculata_contig24322.6591.1|Name=mRNA_H-paniculata_contig24322.6591.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=369bp MRTPGAVLCRIAPSFLRFGSFELPARRGEVAVVRCLADYCLRHLRPYLMSback to top mRNA from alignment at H-paniculata_contig24322:232..2975- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig24322.6591.1 ID=mRNA_H-paniculata_contig24322.6591.1|Name=mRNA_H-paniculata_contig24322.6591.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2744bp|location=Sequence derived from alignment at H-paniculata_contig24322:232..2975- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig24322:232..2975- >mRNA_H-paniculata_contig24322.6591.1 ID=mRNA_H-paniculata_contig24322.6591.1|Name=mRNA_H-paniculata_contig24322.6591.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2214bp|location=Sequence derived from alignment at H-paniculata_contig24322:232..2975- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |