mRNA_H-paniculata_contig24322.6591.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig24322.6591.1
Unique NamemRNA_H-paniculata_contig24322.6591.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig24322.6591.1 vs. uniprot
Match: D7G7V9_ECTSI (Selenoprotein O n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7V9_ECTSI)

HSP 1 Score: 466 bits (1200), Expect = 1.380e-154
Identity = 258/434 (59.45%), Postives = 306/434 (70.51%), Query Frame = 1
Query:    1 IQLKGIGKTPFSRGGDGKAVLGACLKEYLYSEAFNGLGIGAAVVVSVCATGEAALIRDPDPKNSGALMRTPGAVLCRIAPSFLRFGSFELPARRGEVAVVRCLADYCLRHLRPYLMSLDQEVDSSVRTSPSLGKQEKRAASLENDALNSPQAVESGESAIGSDQLKHSYMKGNIEGRKEPREEYMELLVSFVQVTARMVAEWQALGFCHGVLNTDNFTLLGLGLDFGHCSFMEDYVPSWSPNEGDSALRYTFQNQPDVAAWNCERLAEAFSSLVGQSGIAEANDAFLPAFDAAYTFRMQRKLGLEGMDLGNDWAAALRSGSAERHQGTHATLSWDAVFLLDLLRLMANCRTDFTDTWRALIDVPGSSEALKSRNSSELDSDSVGAGESHEDMEVWDDECLQPLAAVLARAKPSQKQRQQWAQWIRQYMARIDSQ 1302
            IQLKGIG+TPFSRGGDGKAVLGACL+E+L+SEAF GLG+ AAV VSVC++GE+A IRD DPKN G   R  GAVLCR APSFLRFGSFELPARRG+V +VR LADYCLRHL P+  S      S +  +   G +  R        L   +  E G+ A G+ +  +  M          R +Y+ELLV+ VQ TARMVA WQA+GFCHGVLNTDNFTLLGLGLDFG CSFME Y P+WSPNEGDSALRY F+NQPDV+AWNCERLAEAFS +VG SG+AEAN AF PAFDAAYT  +Q+KLGL GMDLG+ W    RSG A   +     L  DA F+L    LMA CRTDFT+TWRAL+DVP  S A K+R +  L ++ + A    +D+   D+E L+PL++VL  A  S   R+QWA WIR Y +RIDSQ
Sbjct:  253 IQLKGIGQTPFSRGGDGKAVLGACLREFLFSEAFLGLGLPAAVAVSVCSSGESATIRDSDPKNGGTFKRARGAVLCRTAPSFLRFGSFELPARRGDVTLVRKLADYCLRHLSPHFES------SLLAHATGSGDERTREFLTSGKDLGIGRNEEDGQ-AQGNGKESNQEMGA--------RNDYVELLVAIVQATARMVAGWQAMGFCHGVLNTDNFTLLGLGLDFGPCSFMEAYDPTWSPNEGDSALRYAFRNQPDVSAWNCERLAEAFSPIVGVSGVAEANAAFSPAFDAAYTVHLQKKLGLSGMDLGSGWIHPRRSGDAPAGE-MQEKLPPDAQFVLSFFDLMAACRTDFTETWRALLDVPALSVARKARRN--LTTEHLEATGVEDDICNDDEETLRPLSSVLNAAGASSTARKQWATWIRDYSSRIDSQ 668          
BLAST of mRNA_H-paniculata_contig24322.6591.1 vs. uniprot
Match: A0A1Y1IEC0_KLENI (Selenoprotein O n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IEC0_KLENI)

HSP 1 Score: 197 bits (500), Expect = 2.110e-52
Identity = 147/438 (33.56%), Postives = 207/438 (47.26%), Query Frame = 1
Query:    1 IQLKGIGKTPFSRGGDGKAVLGACLKEYLYSEAFNGLGIGAAVVVSVCATGEAA---LIRDPDPKNSGALMRTPGAVLCRIAPSFLRFGSFELPARRGEVA--VVRCLADYCLRHLRPYLMSLDQEVDSSVRTSPSLGKQEKRAASLENDALNSPQAVESGESAIGSDQLKHSYMKGNIEGRKEPREEYMELLVSFVQVTARMVAEWQALGFCHGVLNTDNFTLLGLGLDFGHCSFMEDYVPSWSPNEGDSALRYTFQNQPDVAAWNCERLAEAF--SSLVGQSGIAEANDAFLPAFDAAYTFRMQRKLGLEGMDLGNDWAAALRSGSAERHQGTHATLSWDAVFLLDLLRLMANCRTDFTDTWRALIDVPGSSEALKSRNSSELDSDSVGAGESHEDMEVWDDECLQPLAAVLARAKPSQKQRQQWAQWIRQYMARI 1293
            +QLKG GKTP+SR  DG+AVL + ++E+L SE  +GLG+     +++  TG      +  D DPK        PGAV+CRIAPSF+RFG+F+LPA RGE    +V+ LADY ++H  P+L                     +R  + E DA    +A  SGE A         Y K            Y  L     + TAR+ A+WQ +GF HGVLNTDN ++LGL +D+G  +F++ +   ++PN  D   RY F NQPDV  WN  +LA AF    L+      E   A+  AF   Y   M  K+GL                             +DA     + +LM     DFT+ +RAL DV   +  L  +++SE                   +E L PL  VL R++    +R  WA W+R Y+ ++
Sbjct:  227 LQLKGAGKTPYSRHADGQAVLRSSVREFLCSETMHGLGVPTTRALTLVTTGRGVWRDMFYDGDPKQE------PGAVVCRIAPSFVRFGTFQLPASRGEAERPLVKQLADYVIKHHYPHL---------------------ERGEAAERDA--GAEASSSGEGAPAG-----GYNK------------YGALFKEVAERTARLAAKWQGVGFAHGVLNTDNMSILGLTIDYGPFAFVDAFDDQFTPNTSDPTRRYAFGNQPDVILWNMVQLANAFIEGELLTTPEAQELLPAYPLAFGTEYRALMAAKMGLP---------------------------EYDADLTTTMFQLMKRDSVDFTNHFRALGDV---TTGLDEQSASE-------------------EELLAPLEGVLGRSE----KRSDWADWMRAYLGKL 565          
BLAST of mRNA_H-paniculata_contig24322.6591.1 vs. uniprot
Match: A0A388K0J0_CHABU (Selenoprotein O n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K0J0_CHABU)

HSP 1 Score: 193 bits (490), Expect = 5.090e-50
Identity = 144/440 (32.73%), Postives = 216/440 (49.09%), Query Frame = 1
Query:    1 IQLKGIGKTPFSRGGDGKAVLGACLKEYLYSEAFNGLGIGAAVVVSVCATGEAALIRDPDPKNSGALMRTPGAVLCRIAPSFLRFGSFELPARRG--EVAVVRCLADYCLRHLRPYLMSLDQEVDSSVRTSPSLGKQEKRAASLENDALNSPQAVESGESAIGSDQLKHSYMKGNIEGRKEPREEYMELLVSFVQVTARMVAEWQALGFCHGVLNTDNFTLLGLGLDFGHCSFMEDYVPSWSPNEGD-SALRYTFQNQPDVAAWNCERL------AEAFSSLVGQSGIAEANDAFLPAFDAAYTFRMQRKLGLEGMDLGNDWAAALRSGSAERHQGTHATLSWDAVFLLDLLRLMANCRTDFTDTWRALIDVPGSSEALKSRNSSELDSDSVGAGESHEDMEVWDDECLQPLAAVLARAKPSQKQRQQWAQWIRQYMARI 1293
            +QLKG GKTP+SR  DG AVL + ++E++ SEA   LG+     +S+ ATGE       D    G + R PGAV+CR+APSF+RFG+F++ A RG  +  +V+ +ADY +++  P L        SS  +S   G +   +A + +              A  SD+   +Y K            Y  LLV   + TA+MVA+WQA+GF HGVLNTDN ++LGL +D+G   F+E + P ++PN  D    RY FQNQPD+  WN  +       AE  ++   + G+A   + FL      Y   M +KLG++                            +D   + DLL LMA  + DFT+ +RAL  V  S+E                 GES +  ++     L PL  VL +    ++Q + W +W+ +Y +++
Sbjct:  430 LQLKGAGKTPYSRFADGMAVLRSSIREFVCSEAMFHLGVPTTRALSLVATGEGVF---RDMFYDGNVRREPGAVVCRMAPSFVRFGTFQIHAARGGEDNILVQRIADYVIKYHFPQLEKKGASTASSSSSSCKEGAENGASAEIHD--------------ASSSDESGKTYNK------------YAALLVEVAERTAKMVAKWQAVGFTHGVLNTDNMSILGLTIDYGPFGFLEAFDPKYTPNTTDLPGRRYCFQNQPDICLWNIVQFVNALLSAELLTTKEAEEGVARYAETFLQD----YGLIMAQKLGIK---------------------------QYDKQMVSDLLALMAADKVDFTNFFRALGKVKVSAEP----------------GESGDGTDI-----LSPLEPVLGKELNEERQGK-WKEWMHRYRSQL 787          
BLAST of mRNA_H-paniculata_contig24322.6591.1 vs. uniprot
Match: A0A5C5UC11_9GAMM (Protein adenylyltransferase SelO n=1 Tax=Luteimonas marina TaxID=488485 RepID=A0A5C5UC11_9GAMM)

HSP 1 Score: 186 bits (472), Expect = 3.180e-49
Identity = 140/411 (34.06%), Postives = 199/411 (48.42%), Query Frame = 1
Query:    1 IQLKGIGKTPFSRGGDGKAVLGACLKEYLYSEAFNGLGIGAAVVVSVCATGEAALIRDPDPKNSGALMRTPGAVLCRIAPSFLRFGSFELPARRGEVAVVRCLADYCLRHLRPYLMSLDQEVDSSVRTSPSLGKQEKRAASLENDALNSPQAVESGESAIGSDQLKHSYMKGNIEGRKEPREEYMELLVSFVQVTARMVAEWQALGFCHGVLNTDNFTLLGLGLDFGHCSFMEDYVPSWSPNEGDSA-LRYTFQNQPDVAAWNCERLAEAFSSLVGQSGIAEAN-DAFLPAFDAAYTFRMQRKLGLEGMDLGNDWAAALRSGSAERHQGTHATLSWDAVFLLDLLRLMANCRTDFTDTWRALIDVPGSSEALKSRNSSELDSDSVGAGESHEDMEVWDDECLQPLAAVLAR 1227
            +QLKG G TP+SR  DG+AVL + ++E+L SEA + LG+     +S+ ATGE  L    D    G     PGA++CR+APSFLRFG FELP  RG+V ++R LAD+C+    P+L+                   ++  A+L+                +  D        G+ + R      Y E      + TAR+VA W  +GF HGVLNTDN ++LGL +D+G   +++DY P W+PN  D+   RY F  QP +A WN  RLA+A S L G +   +A  D +   +  AY   + RKLGL          A  R    ER +  H               LM   + D T  +RAL +V   + +L++   +  D D++  GE  E    W    L+  A  LAR
Sbjct:  123 LQLKGAGLTPYSRSADGRAVLRSSIREFLCSEAMHHLGVPTTRALSLVATGERVL---RDMFYDGRPRAEPGAIVCRVAPSFLRFGHFELPYSRGDVELLRQLADFCIWRDFPHLLG------------------DRAGATLD---------------GLRGD--------GSFDERL-----YGEWFAEVCERTARLVAGWMRVGFVHGVLNTDNMSILGLSIDYGPYGWIDDYDPDWTPNTTDAGGRRYRFGWQPRIAHWNLMRLAQALSPLFGDATPLQAGLDRYAAEYTRAYRDSVARKLGL----------AECRDDDVERMKALHG--------------LMQAAQVDMTLFFRALAEVDSGNPSLEAMRDAFYD-DAL-RGEHGEAFTAW----LRDYALRLAR 454          
BLAST of mRNA_H-paniculata_contig24322.6591.1 vs. uniprot
Match: A0A0U9HMB9_KLENI (Selenoprotein O n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HMB9_KLENI)

HSP 1 Score: 186 bits (473), Expect = 3.740e-49
Identity = 146/442 (33.03%), Postives = 203/442 (45.93%), Query Frame = 1
Query:    1 IQLKGIGKTPFSRGGDGKAVLGACLKEYLYSEAFNGLGIGAAVVVSVCATGEAALIRDPDPKNSGALMRTPGAVLCRIAPSFLRFGSFELPARRG--EVAVVRCLADYCLRHLRPYLMSLDQEVDSSVRTSPSLGKQEKRAASLENDALNSPQAVESGESAIGSDQLKHSYMKGNIEGRKEPREEYMELLVSFVQVTARMVAEWQALGFCHGVLNTDNFTLLGLGLDFGHCSFMEDYVPSWSPNEGDSALRYTFQNQPDVAAWNCERLAEAFSSLVGQSGIAEANDA------FLPAFDAAYTFRMQRKLGLEGMDLGNDWAAALRSGSAERHQGTHATLSWDAVFLLDLLRLMANCRTDFTDTWRALIDVPGSSEALKSRNSSELDSDSVGAGESHEDMEVWDDECLQPLAAVLARAKPSQKQRQQWAQWIRQYMARIDSQ 1302
            +QLKG G+TP+SR  DG+AVL + L+E+L SEA +GLG+     +++  TG        D    G     PGAV+CR+APSF+RFG+F+LPA RG  E  +V+ LADY + H  P L +               G + +R            Q  E+  S I  +           EG      EY  L     + T R+VA WQA+GF HGVLNTDN ++LGL LD+G  +F++ Y   ++PN  D   RY F  QPDV  WN  +LA AF +     G+  A +A      F   F   Y+ RM  KLG+                            ++D  F   LL LM   + DFT+ +RAL  V                  + G GE     E  ++  L+ +  VL    P    +  WAQW+R Y+ ++  Q
Sbjct:  140 LQLKGAGRTPYSRSADGQAVLRSSLREFLCSEAMHGLGVPTTRALTLVGTGTGV---HRDMFYDGHPNLEPGAVVCRMAPSFVRFGTFQLPAERGGKETKLVKFLADYMIEHHFPKLKT---------------GLENRRG-----------QVAEAEMSGIDGE-----------EGVSGKYNEYAALFKEVAERTGRLVAYWQAVGFVHGVLNTDNMSILGLTLDYGPFAFLDAYSDQFTPNTSDPTGRYAFGIQPDVVLWNMVQLANAFFA----GGLLTAAEARALMAVFPQTFGVEYSHRMAAKLGMA---------------------------TFDGDFTTALLALMKRDKVDFTNLFRALSGVT-----------------TEGPGE-----EGTEEGLLRSVEGVL----PEGSVKGDWAQWMRIYIVKLKKQ 484          
BLAST of mRNA_H-paniculata_contig24322.6591.1 vs. uniprot
Match: A0A087SCV4_AUXPR (Selenoprotein O n=4 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SCV4_AUXPR)

HSP 1 Score: 184 bits (467), Expect = 2.320e-48
Identity = 130/371 (35.04%), Postives = 182/371 (49.06%), Query Frame = 1
Query:    1 IQLKGIGKTPFSRGGDGKAVLGACLKEYLYSEAFNGLGIGAAVVVSVCATGEAALIRDPDPKNSGALMRTPGAVLCRIAPSFLRFGSFELPARRG--EVAVVRCLADYCLRHLRPYLMSLDQEVDSSVRTSPSLGKQEKRAASLENDALNSPQAVESGESAIGSDQLKHSYMKGNIEGRKEPREEYMELLVSFVQVTARMVAEWQALGFCHGVLNTDNFTLLGLGLDFGHCSFMEDYVPSWSPNEGD-SALRYTFQNQPDVAAWNCERLAEAF--SSLVGQSGIAEANDAFLPAFDAAYTFRMQRKLGLEGMDLGNDWAAALRSGSAERHQGTHATLSWDAVFLLDLLRLMANCRTDFTDTWRALIDV-PG 1095
            +QLKG GKTPFSR  DG+AVL + L+EY+ SEA   LG+     +S+ ATG A + RD      G +   PGAV+CR+A SF+RFG+F+LP+ RG  ++ +VR +AD+ +R   P+L   + EV +                               G  A G D            G   P  +Y+  L    + TA  V  W  +GF HGVLNTDN ++LG  +D+G  +FME + P+++PN  D    RY F+ QP +  +N   L +AF  + L+   G+ E  D+F  A   A++  M+RKLGL   D G                              DL+ LM   + DFT+TWRAL  V PG
Sbjct:  140 LQLKGAGKTPFSRMADGRAVLRSSLREYVASEAMAALGVPTTRALSLVATG-AGIYRDMF--YDGDVKEEPGAVVCRVARSFVRFGTFQLPSARGGEQLGLVRRVADHVIRRHYPHLNGDNGEVSA-------------------------------GNGAAGED------------GAASPDPKYLRFLKEVAERTAATVVHWHRVGFVHGVLNTDNMSILGDTIDYGPYAFMERFDPNYTPNTTDLPGRRYAFRAQPAICQFNVLMLGKAFVLAGLLDGEGLQEVVDSFTVALSGAFSDAMRRKLGLRDFDPG---------------------------LYGDLMALMIQDKPDFTNTWRALSSVAPG 437          
BLAST of mRNA_H-paniculata_contig24322.6591.1 vs. uniprot
Match: A0A8J4EXV3_9CHLO (Selenoprotein O n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4EXV3_9CHLO)

HSP 1 Score: 184 bits (466), Expect = 1.720e-47
Identity = 143/444 (32.21%), Postives = 200/444 (45.05%), Query Frame = 1
Query:    1 IQLKGIGKTPFSRGGDGKAVLGACLKEYLYSEAFNGLGIGAAVVVSVCATGEAALIRDPDPKNSGALMRTPGAVLCRIAPSFLRFGSFELPARRG--EVAVVRCLADYCLRHLRPYLMSLDQEVDSSVRTSPSLGKQEKRAASLENDALNSPQAVESGESAIGSDQLKHSYMKGNIEGRKEPREEYMELLVSFVQVTARMVAEWQALGFCHGVLNTDNFTLLGLGLDFGHCSFMEDYVPSWSPNEGD-SALRYTFQNQPDVAAWNCERLAEAF--SSLVGQSGIAEANDAFLPAFDAAYTFRMQRKLGLEGMDLGNDWAAALRSGSAERHQGTHATLSWDAVFLLDLLRLMANCRTDFTDTWRALIDVPGSSEALK-------SRNSSELDSDSVGAGESHEDMEVWDDECLQPLAAVLARAKPSQKQR-QQWAQWIRQYMARI 1293
            +QLKG GKTP+SR  DG+AVL + L+EY+ SEA   LG+     +S+  TGE  L    D   +G     PGAV+CR+APSF+RFGSF+LP  RG  EV +V+  AD+ +++  P L +                               SPQ                                Y+ LL   V  T R+VA+WQALGF HGVLNTDN ++LGL +D+G   F++ + P W+PN  D S  RY+++NQP+   +N   LA A   + LV + G  E    +       Y  RM  KLGL+                            +D     +L+RLM +   DFT+T+RAL  V    E  +       S + S   S SVG   +              L+A L   +P   +R   W QW++ Y A++
Sbjct:  251 LQLKGAGKTPYSRRADGRAVLRSSLREYVCSEAMAALGVPTTRALSLVGTGEPVL---RDMFYNGNARWEPGAVVCRVAPSFVRFGSFQLPVSRGAGEVGLVKLAADWVVKYHYPELAA-------------------------------SPQP-------------------------------YLALLREVVHRTGRLVADWQALGFVHGVLNTDNMSILGLTIDYGPFGFLDKFDPDWTPNLTDASGRRYSYRNQPEAVQFNLIMLANALLAADLVSREGAEETLGEYSKVLSETYNARMAAKLGLK---------------------------EYDRALSHELMRLMYDDDADFTNTFRALCSVSSVEEEEEQQFQPDTSESVSRSGSGSVGLTAA--------------LSASLNGGQPLSSERLAAWRQWLQAYRAKL 588          
BLAST of mRNA_H-paniculata_contig24322.6591.1 vs. uniprot
Match: A0A0C2DH36_9DELT (Protein adenylyltransferase SelO n=3 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A0C2DH36_9DELT)

HSP 1 Score: 181 bits (460), Expect = 1.860e-47
Identity = 141/440 (32.05%), Postives = 193/440 (43.86%), Query Frame = 1
Query:    1 IQLKGIGKTPFSRGGDGKAVLGACLKEYLYSEAFNGLGIGAAVVVSVCATGEAALIRDPDPKNSGALMRTPGAVLCRIAPSFLRFGSFELPARRGEVAVVRCLADYCLRHLRPYLMSLDQEVDSSVRTSPSLGKQEKRAASLENDALNSPQAVESGESAIGSDQLKHSYMKGNIEGRKEPREEYMELLVSFVQVTARMVAEWQALGFCHGVLNTDNFTLLGLGLDFGHCSFMEDYVPSWSPNEGDSA-LRYTFQNQPDVAAWNCERLAEAFSSLVGQ-SGIAEANDAFLPAFDAAYTFRMQRKLGLEGMDLGNDWAAALRSGSAERHQGTHATLSWDAVFLLDLLRLMANCRTDFTDTWRALIDVPGSSEALKSRNSSELDSDSVGAGESHEDMEVWDDECLQPLAAVLARAKPSQ---KQRQQWAQWIRQYMARIDSQA 1305
            +QLKG G TP+SR GDG+AVL + ++E+L SEA + LG+     +S+  TG+  ++RD      G     PGA++CR+APSFLRFG+FELP  RGE  ++R LADY +    P L+S   +   S+  S                                                      Y        Q TA MVAEW  +GF HGV+NTDN ++LGL +D+G   ++++Y P W+PN  D+A  RY F NQP +A WN  + A A   LVG      +   AF              KLGLE    G++     RSG +  +Q                +R++ +  TD T  +RAL DVP  + A                          DDE L PL A    A PS      R     W+RQ   R+  +A
Sbjct:  122 LQLKGAGPTPYSRRGDGRAVLRSSVREFLCSEAMHHLGVPTTRALSLVGTGDE-VVRDMF--YDGNAKPEPGAIVCRVAPSFLRFGNFELPMARGEHELLRQLADYAITTHFPELLSQANDAGQSISAST-----------------------------------------------------YAAWFTQVCQRTATMVAEWMRVGFVHGVMNTDNMSVLGLTIDYGPYGWIDNYDPDWTPNTTDAAGRRYRFGNQPRIAMWNLVKFANALHPLVGSVEPFEDGMRAFSDTLGQHTLASFAAKLGLEPF-AGDEDPEDPRSGVSLANQS---------------MRVLGSTPTDMTIFYRALADVPVQANAS-------------------------DDELLAPLWAAYYEADPSTITPATRSLTLAWLRQLGERVRGEA 464          
BLAST of mRNA_H-paniculata_contig24322.6591.1 vs. uniprot
Match: A0A545SGZ0_9GAMM (Protein adenylyltransferase SelO n=1 Tax=Halothiobacillaceae bacterium TaxID=2268194 RepID=A0A545SGZ0_9GAMM)

HSP 1 Score: 180 bits (457), Expect = 3.830e-47
Identity = 127/366 (34.70%), Postives = 174/366 (47.54%), Query Frame = 1
Query:    1 IQLKGIGKTPFSRGGDGKAVLGACLKEYLYSEAFNGLGIGAAVVVSVCATGEAALIRDPDPKNSGALMRTPGAVLCRIAPSFLRFGSFELPARRGEVAVVRCLADYCLRHLRPYLMSLDQEVDSSVRTSPSLGKQEKRAASLENDALNSPQAVESGESAIGSDQLKHSYMKGNIEGRKEPREEYMELLVSFVQVTARMVAEWQALGFCHGVLNTDNFTLLGLGLDFGHCSFMEDYVPSWSPNEGDS-ALRYTFQNQPDVAAWNCERLAEAFSSLVGQ-SGIAEANDAFLPAFDAAYTFRMQRKLGLEGMDLGNDWAAALRSGSAERHQGTHATLSWDAVFLLDLLRLMANCRTDFTDTWRALIDVP 1092
            +QLKG G TP++R  DG+AVL + L+E+L SEA + LGI     +S+ ATG+A L    D   +G +   PGAV+CR+APSF RFG FE+ A R + A++R LAD+ LRH  P L                                  P   E+                            Y+ L  +  + TA MVA W  +GF HGV+NTDN ++LGL +D+G   ++EDY P W+PN  D+   RY +  QP+VA WN  RLAEA   LVG    + EA   +  A+   +   +  KLG         W A         H+G       D     DLL +M   + D+T  +R LID+P
Sbjct:  125 LQLKGAGPTPYARSADGRAVLRSSLREFLCSEAMHHLGIPTTRALSLVATGDAVL---RDMLYTGDMRPEPGAVVCRVAPSFTRFGHFEIHAARKDHALLRQLADHTLRHDYPEL---------------------------------GPPGTEA----------------------------YLALFRAVCRRTAVMVAHWMRVGFVHGVMNTDNMSILGLTIDYGPYGWLEDYDPDWTPNTTDARGRRYAYARQPEVAGWNLARLAEALIPLVGTVEPLQEAMAVYGEAYATTWRGMLAAKLG---------WKA---------HRGAE-----DDRLFEDLLEIMRRAQCDWTILFRTLIDLP 403          
BLAST of mRNA_H-paniculata_contig24322.6591.1 vs. uniprot
Match: UPI0019AC59FC (UPF0061 protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=UPI0019AC59FC)

HSP 1 Score: 179 bits (455), Expect = 6.170e-47
Identity = 128/364 (35.16%), Postives = 175/364 (48.08%), Query Frame = 1
Query:    1 IQLKGIGKTPFSRGGDGKAVLGACLKEYLYSEAFNGLGIGAAVVVSVCATGEAALIRDPDPKNSGALMRTPGAVLCRIAPSFLRFGSFELPARRGEVAVVRCLADYCLRHLRPYLMSLDQEVDSSVRTSPSLGKQEKRAASLENDALNSPQAVESGESAIGSDQLKHSYMKGNIEGRKEPREEYMELLVSFVQVTARMVAEWQALGFCHGVLNTDNFTLLGLGLDFGHCSFMEDYVPSWSPNEGDS-ALRYTFQNQPDVAAWNCERLAEAFSSLVGQSGIAEANDAFLPAFDAAYTFRMQRKLGLEGMDLGNDWAAALRSGSAERHQGTHATLSWDAVFLLDLLRLMANCRTDFTDTWRALIDV 1089
            +QLKG G+TP+SRG DG+AVL + ++E+L SEA + LG+     +S+ ATGEA ++RD      G     PGA++CR+APSF+RFGSFELPA RG+ A++R LAD+ +    P                                                            ++GR  P   Y        + TA +VA W  +GF HGV+NTDN ++LGL +D+G   +++DY P W+PN  D+   RY F  QP VA WN  RLA+A S L      AE  +A L  F A Y    +R           D AA L  G AE  +G       D     +L  LM     D T T+R+L++V
Sbjct:  121 LQLKGAGRTPYSRGADGRAVLRSSIREFLCSEAMHHLGVPTTRALSLVATGEA-VVRDMF--YDGHPRAEPGAIVCRVAPSFVRFGSFELPASRGDAALLRRLADFTISRDFP-----------------------------------------------------------GLQGRDGPG--YAAWFAQVCERTAELVAHWMRVGFVHGVMNTDNMSILGLTIDYGPYGWVDDYDPDWTPNTTDAQGRRYRFGTQPQVAYWNLGRLAQALSPLFAD---AEPLNAGLERFRATYLACQRR-----------DTAAKL--GLAECREG-------DLELAGELYALMQRAEMDMTLTFRSLVEV 397          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24322.6591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7V9_ECTSI1.380e-15459.45Selenoprotein O n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
A0A1Y1IEC0_KLENI2.110e-5233.56Selenoprotein O n=1 Tax=Klebsormidium nitens TaxID... [more]
A0A388K0J0_CHABU5.090e-5032.73Selenoprotein O n=1 Tax=Chara braunii TaxID=69332 ... [more]
A0A5C5UC11_9GAMM3.180e-4934.06Protein adenylyltransferase SelO n=1 Tax=Luteimona... [more]
A0A0U9HMB9_KLENI3.740e-4933.03Selenoprotein O n=1 Tax=Klebsormidium nitens TaxID... [more]
A0A087SCV4_AUXPR2.320e-4835.04Selenoprotein O n=4 Tax=Auxenochlorella prototheco... [more]
A0A8J4EXV3_9CHLO1.720e-4732.21Selenoprotein O n=1 Tax=Volvox africanus TaxID=517... [more]
A0A0C2DH36_9DELT1.860e-4732.05Protein adenylyltransferase SelO n=3 Tax=Enhygromy... [more]
A0A545SGZ0_9GAMM3.830e-4734.70Protein adenylyltransferase SelO n=1 Tax=Halothiob... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24322contigH-paniculata_contig24322:232..2975 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score371.3
Seed ortholog evalue5.2e-100
Seed eggNOG ortholog2880.D7G7V9
Preferred nameSELO
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Uncharacterized ACR, YdiU/UPF0061 family
EggNOG OGsCOG0397@1,KOG2542@2759
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1447
Cds size1107
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24322.6591.1prot_H-paniculata_contig24322.6591.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig24322 692..2500 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929702.0520334-UTR-H-paniculata_contig24322:231..3661622929702.0520334-UTR-H-paniculata_contig24322:231..366Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig24322 232..366 -
1691480973.2931938-UTR-H-paniculata_contig24322:231..3661691480973.2931938-UTR-H-paniculata_contig24322:231..366Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig24322 232..366 -
1622929702.0690467-UTR-H-paniculata_contig24322:687..6911622929702.0690467-UTR-H-paniculata_contig24322:687..691Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig24322 688..691 -
1691480973.3047168-UTR-H-paniculata_contig24322:687..6911691480973.3047168-UTR-H-paniculata_contig24322:687..691Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig24322 688..691 -
1622929702.1501434-UTR-H-paniculata_contig24322:2500..26431622929702.1501434-UTR-H-paniculata_contig24322:2500..2643Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig24322 2501..2643 -
1691480973.3590922-UTR-H-paniculata_contig24322:2500..26431691480973.3590922-UTR-H-paniculata_contig24322:2500..2643Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig24322 2501..2643 -
1622929702.1716151-UTR-H-paniculata_contig24322:2917..29751622929702.1716151-UTR-H-paniculata_contig24322:2917..2975Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig24322 2918..2975 -
1691480973.367004-UTR-H-paniculata_contig24322:2917..29751691480973.367004-UTR-H-paniculata_contig24322:2917..2975Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig24322 2918..2975 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929702.0860088-CDS-H-paniculata_contig24322:691..11761622929702.0860088-CDS-H-paniculata_contig24322:691..1176Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24322 692..1176 -
1691480973.31517-CDS-H-paniculata_contig24322:691..11761691480973.31517-CDS-H-paniculata_contig24322:691..1176Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24322 692..1176 -
1622929702.1034136-CDS-H-paniculata_contig24322:1532..16661622929702.1034136-CDS-H-paniculata_contig24322:1532..1666Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24322 1533..1666 -
1691480973.3264775-CDS-H-paniculata_contig24322:1532..16661691480973.3264775-CDS-H-paniculata_contig24322:1532..1666Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24322 1533..1666 -
1622929702.1192148-CDS-H-paniculata_contig24322:1908..20181622929702.1192148-CDS-H-paniculata_contig24322:1908..2018Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24322 1909..2018 -
1691480973.3374507-CDS-H-paniculata_contig24322:1908..20181691480973.3374507-CDS-H-paniculata_contig24322:1908..2018Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24322 1909..2018 -
1622929702.1357603-CDS-H-paniculata_contig24322:2122..25001622929702.1357603-CDS-H-paniculata_contig24322:2122..2500Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24322 2123..2500 -
1691480973.3514667-CDS-H-paniculata_contig24322:2122..25001691480973.3514667-CDS-H-paniculata_contig24322:2122..2500Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig24322 2123..2500 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig24322.6591.1

>prot_H-paniculata_contig24322.6591.1 ID=prot_H-paniculata_contig24322.6591.1|Name=mRNA_H-paniculata_contig24322.6591.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=369bp
MRTPGAVLCRIAPSFLRFGSFELPARRGEVAVVRCLADYCLRHLRPYLMS
LDQEVDSSVRTSPSLGKQEKRAASLENDALNSPQAVESGESAIGSDQLKH
SYMKGNIEGRKEPREEYMELLVSFVQVTARMVAEWQALGFCHGVLNTDNF
TLLGLGLDFGHCSFMEDYVPSWSPNEGDSALRYTFQNQPDVAAWNCERLA
EAFSSLVGQSGIAEANDAFLPAFDAAYTFRMQRKLGLEGMDLGNDWAAAL
RSGSAERHQGTHATLSWDAVFLLDLLRLMANCRTDFTDTWRALIDVPGSS
EALKSRNSSELDSDSVGAGESHEDMEVWDDECLQPLAAVLARAKPSQKQR
QQWAQWIRQYMARIDSQA*
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mRNA from alignment at H-paniculata_contig24322:232..2975-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig24322.6591.1 ID=mRNA_H-paniculata_contig24322.6591.1|Name=mRNA_H-paniculata_contig24322.6591.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2744bp|location=Sequence derived from alignment at H-paniculata_contig24322:232..2975- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATCCAACTCAAGGGAATCGGGAAGACACCATTTTCGCGAGGCGGTGACGG AAAAGCAGGTGAGGTAGGCGCCGTCAAGACTACTAGACCCCCAGAACCTT CTACTGATGGGCAAAAAATGCTGTTGTTTATTTTGCGGGCCATGCAAAGT TGAATATACATAAAGAGTCGTACTGTTGCGTTTACCCGACTTTCATTCAC TTGTCTTGACCACATCAGACTTATATGCTTCCATGAATGCCCTATTTCCT GCTGAATCTTTTCAGCAGCATGTTTCTATATGCTTATCTTCTCATTCTCA TCGTGCGAGTCGTCATGCCCGTTGGCCTGCAGTACTTGGAGCATGCCTGA AGGAATATTTATACAGCGAGGCCTTCAATGGTTTGGGCATCGGGGCAGCG GTCGTCGTTTCGGTTTGCGCTACAGGAGAGGCAGCATTGATCAGAGACCC AGACCCCAAAAATAGCGGTGCGCTCATGCGGACGCCTGGCGCGGTTCTTT GTCGCATTGCACCCAGCTTCCTGCGATTTGGATCCTTCGAGCTACCAGCG AGGAGGGGTGAGGTGGCTGTTGTGAGATGCTTGGCGGACTACTGCCTTCG CCATCTTCGCCCTTATTTGATGTCGCTCGACCAAGAGGTCGACTCGAGCG TCCGCACTTCGCCTAGCCTAGGGAAACAGGAAAAACGCGCCGCATCGCTC GAAAATGATGCTCTGAACTCTCCGCAGGCGGTAGAGAGTGGCGAATCTGC GATTGGCAGCGATCAGCTAAAGCATTCATACATGAAGGGAAATATCGAAG GCAGGAAAGAGCCTCGAGAAGAATACATGGAGTTGTTGGTTTCTTTTGTG CAGGTGAGCCTTGTGAAGAGAGCATCACTCATTGTGTCTGCCGAAGTTTG AAGCTCTTGCCATGATCACGTACGTCTTTTGATATTGTTTCTCTTACCCA CTGCCAGGTGACAGCGAGGATGGTGGCTGAGTGGCAAGCGCTGGGCTTTT GCCACGGCGTCCTTAACACCGACAATTTCACTCTACTCGGCCTAGGTCTC GACTTCGGCCACTGCAGGTTTGTACGGCGGCATTGTGGCATCAGTACTAC GAAAATATTCTAGTCCTCTTTCTACTTCTAGGTGGTTGAAGGACTTATTC CATGAAGAATTTGTAAATAAACAACTTACGCCTGAGGTTGAAACCTGTAT ATCCTGTGCGTAAGGGTCACGTTTACATGGGCCTCGTGCAGTCGCTGTCA TCACTGTTTCGGCGTCTCACCGTCGTGCATCCGCTTACGCATGGTACCAA CTGAGGTAGTTTCATGGAGGATTACGTGCCATCATGGTCTCCAAATGAGG GTGATTCTGCGCTTCGATATACCTTTCAAAATCAGCCCGATGTCGCGGCG TGGAACTGCGAACGACTAGCTGAGGCCTTCTCGTCGCTAGTAGGTGAGCC CACTTGTCCTGCAGAGGGTACGCTGTCGTTTCTGGAAACTGTTTCTTGAA GATACCCTATGCGCTGCTTAAGCTCAATATTGGCACTACCCGACGGACGG AATGGTGAGTCCCAGCACTTCTGGTTTTTTTCGGTCGACACTTTCGGTAG CGTAGTTGGGTCGCGTTTGTTCCGTCACTCGTTTGCCACCGCTCAGCAAA CCGCTCCAAGCTTCTCGGACACAAGTGGATGGTTTTTGCTTCCTGGCTGC AGCTGGAGCAACAATCAATAGTGCTCCCCTCGATTAAGTGTAAGCTAATG CGATTAGTACTGGAGGAACAACGTGCGTTGGACACCGTTTGCAGTGCAGG TCAATCCGGAATTGCTGAAGCGAATGACGCCTTCTTGCCAGCCTTCGATG CCGCCTACACCTTTCGCATGCAACGGAAGCTGGGACTAGAGGGCATGGAC CTTGGGAATGACTGGGCAGCCGCGCTGCGGAGTGGGTCCGCCGAACGACA TCAAGGAACACACGCCACATTATCGTGGGACGCTGTTTTCTTGTTGGATT TGTTGAGATTGATGGCAAACTGTAGAACAGACTTCACGGACACCTGGCGG GCTCTGATCGATGTGCCTGGTTCGTCAGAAGCTTTGAAGAGTAGGAACTC TTCGGAGTTGGACAGCGACAGCGTAGGTGCTGGTGAGAGTCATGAAGACA TGGAAGTTTGGGACGATGAATGTCTCCAGCCTCTCGCCGCTGTCTTGGCC CGTGCGAAGCCGTCACAAAAGCAAAGGCAGCAATGGGCGCAATGGATACG TCAGTACATGGCCCGTATTGACTCACAGGCATGAAGGAGTGAATAAAGGA ATGAGTTACTGAATGAATAATAAATATCTCTGCAAATGGAAAAACTAAGG TTGTTGATGGGTCATTTGGTGATATTTCGGGGCGGGTCATTCACATTCGG CAGGTAGATTCTCGAACGCCTGTTTTTCTTCGGGATTCATCGGTTGTGCA TTCGTGATCAATGTACATGAGCGCAGCCAAATTTTCGCAGTTCCATACTG AAGAGACCCGCCGTGGTATCCCTTCAGATTAATTCGCTGGATCATGTTCC GCTTTTGATGTCTGACGGCAACCCCAAAATGGTAACTGTTTTACTTTCTG GACGAGTAGGGCATTGGAAGGTACCATCCCGAGGGAGAAGAGGAAGGGCG GCGTGAAAGGCTCGAGGTCATGCGAGCCAGTAACCCCGCTTTTATCCTAC GAGCAAGAGCTTTGGACCAGGCAGTGAAAGCCGCAGAGAACGGA
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Coding sequence (CDS) from alignment at H-paniculata_contig24322:232..2975-

>mRNA_H-paniculata_contig24322.6591.1 ID=mRNA_H-paniculata_contig24322.6591.1|Name=mRNA_H-paniculata_contig24322.6591.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2214bp|location=Sequence derived from alignment at H-paniculata_contig24322:232..2975- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGGACGCCTGGCGCGGTTCTTTGTCGCATTGCACCCAGCTTCCTGCG
ATTTGGATCCTTCGAGCTACCAGCGAGGAGGGGTGAGGTGGCTGTTGTGA
GATGCTTGGCGGACTACTGCCTTCGCCATCTTCGCCCTTATTTGATGTCG
CTCGACCAAGAGGTCGACTCGAGCGTCCGCACTTCGCCTAGCCTAGGGAA
ACAGGAAAAACGCGCCGCATCGCTCGAAAATGATGCTCTGAACTCTCCGC
AGGCGGTAGAGAGTGGCGAATCTGCGATTGGCAGCGATCAGCTAAAGCAT
TCATACATGAAGGGAAATATCGAAGGCAGGAAAGAGCCTCGAGAAGAATA
CATGGAGTTGTTGGTTTCTTTTGTGCAGATGCGGACGCCTGGCGCGGTTC
TTTGTCGCATTGCACCCAGCTTCCTGCGATTTGGATCCTTCGAGCTACCA
GCGAGGAGGGGTGAGGTGGCTGTTGTGAGATGCTTGGCGGACTACTGCCT
TCGCCATCTTCGCCCTTATTTGATGTCGCTCGACCAAGAGGTCGACTCGA
GCGTCCGCACTTCGCCTAGCCTAGGGAAACAGGAAAAACGCGCCGCATCG
CTCGAAAATGATGCTCTGAACTCTCCGCAGGCGGTAGAGAGTGGCGAATC
TGCGATTGGCAGCGATCAGCTAAAGCATTCATACATGAAGGGAAATATCG
AAGGCAGGAAAGAGCCTCGAGAAGAATACATGGAGTTGTTGGTTTCTTTT
GTGCAGGTGACAGCGAGGATGGTGGCTGAGTGGCAAGCGCTGGGCTTTTG
CCACGGCGTCCTTAACACCGACAATTTCACTCTACTCGGCCTAGGTCTCG
ACTTCGGCCACTGCAGGTGACAGCGAGGATGGTGGCTGAGTGGCAAGCGC
TGGGCTTTTGCCACGGCGTCCTTAACACCGACAATTTCACTCTACTCGGC
CTAGGTCTCGACTTCGGCCACTGCAGTTTCATGGAGGATTACGTGCCATC
ATGGTCTCCAAATGAGGGTGATTCTGCGCTTCGATATACCTTTCAAAATC
AGCCCGATGTCGCGGCGTGGAACTGCGAACGACTAGCTGAGGCCTTCTCG
TCGCTAGTAGTTTCATGGAGGATTACGTGCCATCATGGTCTCCAAATGAG
GGTGATTCTGCGCTTCGATATACCTTTCAAAATCAGCCCGATGTCGCGGC
GTGGAACTGCGAACGACTAGCTGAGGCCTTCTCGTCGCTAGTAGGTCAAT
CCGGAATTGCTGAAGCGAATGACGCCTTCTTGCCAGCCTTCGATGCCGCC
TACACCTTTCGCATGCAACGGAAGCTGGGACTAGAGGGCATGGACCTTGG
GAATGACTGGGCAGCCGCGCTGCGGAGTGGGTCCGCCGAACGACATCAAG
GAACACACGCCACATTATCGTGGGACGCTGTTTTCTTGTTGGATTTGTTG
AGATTGATGGCAAACTGTAGAACAGACTTCACGGACACCTGGCGGGCTCT
GATCGATGTGCCTGGTTCGTCAGAAGCTTTGAAGAGTAGGAACTCTTCGG
AGTTGGACAGCGACAGCGTAGGTGCTGGTGAGAGTCATGAAGACATGGAA
GTTTGGGACGATGAATGTCTCCAGCCTCTCGCCGCTGTCTTGGCCCGTGC
GAAGCCGTCACAAAAGCAAAGGCAGCAATGGGCGCAATGGATACGTCAGT
ACATGGCCCGTATTGACTCACAGGCATGAGTCAATCCGGAATTGCTGAAG
CGAATGACGCCTTCTTGCCAGCCTTCGATGCCGCCTACACCTTTCGCATG
CAACGGAAGCTGGGACTAGAGGGCATGGACCTTGGGAATGACTGGGCAGC
CGCGCTGCGGAGTGGGTCCGCCGAACGACATCAAGGAACACACGCCACAT
TATCGTGGGACGCTGTTTTCTTGTTGGATTTGTTGAGATTGATGGCAAAC
TGTAGAACAGACTTCACGGACACCTGGCGGGCTCTGATCGATGTGCCTGG
TTCGTCAGAAGCTTTGAAGAGTAGGAACTCTTCGGAGTTGGACAGCGACA
GCGTAGGTGCTGGTGAGAGTCATGAAGACATGGAAGTTTGGGACGATGAA
TGTCTCCAGCCTCTCGCCGCTGTCTTGGCCCGTGCGAAGCCGTCACAAAA
GCAAAGGCAGCAATGGGCGCAATGGATACGTCAGTACATGGCCCGTATTG
ACTCACAGGCATGA
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