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Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR033443 | Pentacotripeptide-repeat region of PRORP | PFAM | PF17177 | PPR_long | coord: 365..467
e-value: 4.9E-10
score: 39.1 |
| IPR002885 | Pentatricopeptide repeat | TIGRFAM | TIGR00756 | TIGR00756 | coord: 306..340
e-value: 4.7E-8
score: 30.7
coord: 236..270
e-value: 9.0E-8
score: 29.8
coord: 341..375
e-value: 1.0E-6
score: 26.5
coord: 376..408
e-value: 6.6E-4
score: 17.7
coord: 169..200
e-value: 4.7E-5
score: 21.3
coord: 411..442
e-value: 3.0E-7
score: 28.2
coord: 201..235
e-value: 2.0E-8
score: 31.9
coord: 271..305
e-value: 1.1E-6
score: 26.5 |
| IPR002885 | Pentatricopeptide repeat | PFAM | PF13041 | PPR_2 | coord: 303..350
e-value: 1.4E-10
score: 41.2
coord: 198..245
e-value: 2.8E-13
score: 49.8 |
| IPR002885 | Pentatricopeptide repeat | PFAM | PF01535 | PPR | coord: 271..301
e-value: 0.0025
score: 17.9
coord: 169..196
e-value: 0.0075
score: 16.4 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 164..198
score: 9.821 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 339..373
score: 11.794 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 444..473
score: 7.136 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 234..268
score: 11.356 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 269..303
score: 11.488 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 374..408
score: 10.841 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 199..233
score: 12.419 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 409..443
score: 11.509 |
| IPR002885 | Pentatricopeptide repeat | PROSITE | PS51375 | PPR | coord: 304..338
score: 11.959 |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | GENE3D | 1.25.40.10 | | coord: 385..473
e-value: 1.0E-21
score: 79.1
coord: 278..384
e-value: 5.2E-36
score: 125.7
coord: 131..277
e-value: 1.1E-36
score: 127.9 |
| None | No IPR available | PANTHER | PTHR46128 | FAMILY NOT NAMED | coord: 326..471
coord: 164..343 |
| None | No IPR available | PRODOM | PD104036 | | coord: 201..306
e-value: 0.001
score: 103.0 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig24320.6590.1 ID=prot_H-paniculata_contig24320.6590.1|Name=mRNA_H-paniculata_contig24320.6590.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=474bp
MIFSPAASSAARSVSGICWFSRELKALGHDDLWKIAKSSGRCVSYQVCAK
PSHQLTVALVRSPRDNPQSAARSLSFPGQRAELCSTGYAHLPSKGLLAPN
SGAHRWVKARNEKMGKTRARNTRPGLQSQPWYIMQQLKEAGFRRDWRQVE
LVLSDALVASDVDSLRASNAAINALGRCARWDKALNLLIKMQAKGIYPDV
VSYNSAMKACSNCRQWEKAVDLLVEMQTKGVSPNAVSYNTAMKAYGSGAQ
WEKALDLLTEMEAKDISPDVVSYTSAMKACGDCGQWGKTLDLLTEMQAKG
ISPNVVSYSSAMTACGKGGQWQKTLDLFAEMQAKGVSPNVVSYTSAMEAY
GDSGQWEKTLGLLGEMRAKGVPPDVVSYTAAIKTCRDCRQWENALGLLAE
MQAKGISPKAVTYNLTIAACSKAGQWSKALAVLDEMKANGISSVDISYGS
AVKACRDAGRYIEADRVLKEMRP* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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