mRNA_H-paniculata_contig11005.657.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig11005.657.1 vs. uniprot
Match: D7FT94_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT94_ECTSI) HSP 1 Score: 361 bits (926), Expect = 6.340e-111 Identity = 174/253 (68.77%), Postives = 209/253 (82.61%), Query Frame = 2
Query: 479 KQPCEGCDCGLNGAAEPPGPLEGTMHAYESHIIICSGHEDWPKMIEAEEASIAQSLHNMCLGAGLIWTKQLAKAAAAEGKVAAPNRVKISACTEPSRGRPGYTDVIVYPEGLVYSLDPNDLDALQTFVKVQLADRKVATELKPVPVSYEKMVLVCTHASRDKRCGRAGPQVLEAMAKELESRGIREDQVAIRGSSHFGGHKYAGVLIIYPQGDWYGLVNKKNAACIIDKVVLGTSMMKANWRGNMSNPGRKAE 1237
K+PC GCDCGL PGP+EGTMHAYE HIIICSGH++WPK++EAEE+S+A+SL N+CLGAGLI+TK++A AA G V +VKISAC+EPSRGR G TDVIVYPEGL+YSL +D +L+ F+ VQL + +VAT+LKPVPVSY+KMVLVCTH SRDKRCGRAGPQV+ M K L+ RG+ D++A+RGSSHFGGHKYAGVLIIYPQGDW+GLV+KKNA I+DK VLGT MK NWRGNM++PG K E
Sbjct: 81 KEPCGGCDCGLM----EPGPIEGTMHAYERHIIICSGHQNWPKVVEAEESSLAESLFNLCLGAGLIFTKKVALAAKKAG-VPKTRQVKISACSEPSRGREGTTDVIVYPEGLIYSLSRDDTSSLEQFLNVQLINGEVATQLKPVPVSYKKMVLVCTHMSRDKRCGRAGPQVIGEMEKALQERGVGPDEIAVRGSSHFGGHKYAGVLIIYPQGDWFGLVSKKNAPAIVDKCVLGTEGMKTNWRGNMADPGTKKE 328
BLAST of mRNA_H-paniculata_contig11005.657.1 vs. uniprot
Match: A0A2P6NW20_9EUKA (Altered inheritance of mitochondria protein 32 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NW20_9EUKA) HSP 1 Score: 146 bits (368), Expect = 1.570e-35 Identity = 96/246 (39.02%), Postives = 134/246 (54.47%), Query Frame = 2
Query: 518 AAEPPGP-LEGTMHA-YESHIIICSGHEDWPKMIEAEEASIAQSLHNMCLGAGLIWTKQLAKAAAAEGKVAAPNRVKISACTEPSRGRPGYTDVIVYPEGLVYSLDP------------NDLDALQTFVKVQLADRKVATELKPVPVSYEKMVLVCTHASRDKRCGRAGPQVLEAMAKELESRGIREDQVAIRGSSHFGGHKYAGVLIIYPQGDWYGLVNKKNAACIIDKVVLGTSMMKANWRGNM 1213
A +P P L GT+ Y+ H+I+CSG DW E E + SL TK+L +G+ P + + C+EP+R G D+IVYPEG VYS + + D L +FV L D + + V++E +VLVCTH +RDKRCGR GPQV++ + L R I D+VAI GSSH GGHKYA V+++YP+GDWYG + KNA+ ++D + S+ +RG M
Sbjct: 16 ANQPYNPKLVGTVKKDYKRHLILCSGQMDWTGKPEKESGTFINSL-----------TKELKSRNLPDGE---PGTL-FTLCSEPNRSDKG-VDIIVYPEG-VYSNEEVLSEKGVRYFQVTEAD-LPSFVDHILKD-EAPPNIHKEKVTWEHVVLVCTHGTRDKRCGRIGPQVVDQLTGMLSERNISSDKVAILGSSHLGGHKYAAVVVVYPEGDWYGQMTAKNASDLMDAYLQCKSLYPPGFRGKM 242
BLAST of mRNA_H-paniculata_contig11005.657.1 vs. uniprot
Match: L8H8Q7_ACACA (Ferredoxin, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H8Q7_ACACA) HSP 1 Score: 147 bits (370), Expect = 1.660e-35 Identity = 92/255 (36.08%), Postives = 132/255 (51.76%), Query Frame = 2
Query: 491 EGCDCGLNGAAEPPGP------------LEGTMHAYESHIIICSGHE--DWPKMIEAEEASIAQSLHNMCLGAGLIWTKQLAKAAAAEGKVAAPNRVKISACTEPSRGRPGYTDVIVYPEGLVYSLDPNDLDALQTFVKVQLADRKVATELKPVPVSYEKMVLVCTHASRDKRCGRAGPQVLEAMAKELESRGIREDQVAIRGSSHFGGHKYAGVLIIYPQGDWYGLVNKKNAACIIDKVVLGTSMMKANWRGNM 1213
E C+CGL A P L GT+ YE H IICSG E +W I+ +E S AQ LAK A K + K++ E S+G G TD+IV+PE + Y + + V+ L + V+ +K P E +VLVC H +RD RCG GP ++ A + L +RG+ ED+V +R SSH GGHKYAGV+++YP+GDW+G + ++ ++D + SM+ +WRG M
Sbjct: 23 ETCECGLTVAQGGCAPASSSSASLYNSQLLGTVKKYEKHFIICSGTEPDEWGAKIDKDEGSFAQ----------------LAKQAITARKAELTFKFKLTNSDERSKGSEG-TDLIVFPERIRYL--GVTAETMPFIVEDHLVNGHVSERVKHEPFESE-LVLVCCHNNRDTRCGAEGPIIVSAFDRLLAARGLGEDKVMVRSSSHLGGHKYAGVVVVYPRGDWFGFITEQQVEKLLDNYIEHGSMVPEHWRGRM 257
BLAST of mRNA_H-paniculata_contig11005.657.1 vs. uniprot
Match: UPI0001FE36D4 (hypothetical protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=UPI0001FE36D4) HSP 1 Score: 140 bits (352), Expect = 3.840e-32 Identity = 74/172 (43.02%), Postives = 114/172 (66.28%), Query Frame = 2
Query: 701 AAAEGKVAAPNRVKISACTEPSRGRPGYTDVIVYPEGLVYSLDPNDLDALQTFVKVQLADRKVATELKPVPVSYEKMVLVCTHASRDKRCGRAGPQVLEAMAKELESRGIREDQVAIRGSSHFGGHKYAGVLIIYPQGDWYGLVNKKNAACIIDKVVLGT-SMMKANWRGNM 1213
A++EG+ + P ++AC+E ++G G TDVIVYPEG+ Y ++ + FV+ Q+ VA + PV +VLVCTH +RD RCGR+GPQV++ +A+ + R I +D +A+RGSSH GGHKYAGV+++YP GDWYG+++ +NA +ID + ++ N+RG +
Sbjct: 202 ASSEGRQSVP---LVTACSELTKGDFG-TDVIVYPEGIRYL--GVTIEQIPEFVEYQVVRGVVAQNIPHEPVDKRYLVLVCTHGTRDARCGRSGPQVMDKLAELMAERSIGDDTIAVRGSSHLGGHKYAGVVVVYPPGDWYGMLSGRNADKLIDAYLEHQPELISKNFRGRI 367
BLAST of mRNA_H-paniculata_contig11005.657.1 vs. uniprot
Match: A0A2E0UXF4_9CHLR (Uncharacterized protein n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0UXF4_9CHLR) HSP 1 Score: 121 bits (303), Expect = 5.620e-27 Identity = 75/226 (33.19%), Postives = 121/226 (53.54%), Query Frame = 2
Query: 539 LEGTMHAYESHIIICSGHEDWPKMIEAEEASIAQSLHNMCLGAGLIWTKQLAKAAAAEGKVAAPNRVKISACTEPSRGRPGYTDVIVYPEGL-VYSLDPNDLDALQTFVKVQLADRKVATELKPVPVSYEKMVLVCTHASRDKRCGRAGPQVLEAMAKELESRGIREDQVAIRGSSHFGGHKYAGVLIIYPQGDWYGLVNKKNAACIIDKVVLGTSMMKANWRGNM 1213
L GT+ Y HII+CSGH +WP I+ +E ++L + K+ N +K++AC P+ G G T ++V+P+ + + L ++L+ L +++ + +R + E P + ++LVC H +RD RCG A P V++ M +E + E QV + SSH GGHK+AGV ++YP G+WYG + +++AA +I L A WRG M
Sbjct: 17 LPGTVKYYNRHIIVCSGHSEWPAKIQ-DEGGFIKALSSSI------------------NKITELNAIKLTACDLPAVGD-GET-ILVFPDRVRISGLTEDNLENLINYLRDGI-ERGLKIESFP-----KFLILVCGHQNRDNRCGLAAPGVMQKMMNVIEQFDLTE-QVLVSRSSHLGGHKFAGVAVVYPSGNWYGRLTEQDAANVIKAECLDRQPYPALWRGRM 214
BLAST of mRNA_H-paniculata_contig11005.657.1 vs. uniprot
Match: A0A0M8KAU1_9CHLR (Uncharacterized protein n=2 Tax=Ardenticatenia TaxID=1382928 RepID=A0A0M8KAU1_9CHLR) HSP 1 Score: 117 bits (294), Expect = 6.540e-26 Identity = 78/229 (34.06%), Postives = 121/229 (52.84%), Query Frame = 2
Query: 545 GTMHAYESHIIICSGHEDWPKMIEAEEASIAQSLHNMCLGAGLIWTKQLAKAAAAEGKVAAPN---RVKISACTEPSRGRPGYTDVIVYPEGLVY-SLDPNDLDALQTFVKVQLADRKVATEL--KPVPVSYEKMVLVCTHASRDKRCGRAGPQVLEAMAKELESRGIREDQVAIRGSSHFGGHKYAGVLIIYPQGDWYGLVNKKNAACIIDKVVLGTSMMKANWRGNM 1213
G++ Y+ H I+C+G W +E G G + +A A K P+ +++++A EPS G GY DV+V+P+G+ Y L D+ T ++ L + + L +PV V Y VLVC HA RD+RCGRAGP +++ + L+ G+ D+ + SSH GGHK+AG +I+YP GDWYGLV + I+ + + ++ A WRG +
Sbjct: 14 GSVKRYDRHFIVCTGVRHWAPKVEQ--------------GGGFL------QALADATKPLEPHLGQKIRVTASDEPSEGD-GY-DVLVFPDGVRYLGLREEDIP---TLIEDHLLGGRPSPRLAHRPVEVGY---VLVCVHAERDERCGRAGPPLVDRFWEVLDREGL-SDRYRVVASSHLGGHKFAGNIIVYPSGDWYGLVTPADVERIVREHLREGRIVAALWRGRI 213
BLAST of mRNA_H-paniculata_contig11005.657.1 vs. uniprot
Match: A0A1Y1I1V5_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I1V5_KLENI) HSP 1 Score: 119 bits (297), Expect = 6.820e-25 Identity = 80/234 (34.19%), Postives = 120/234 (51.28%), Query Frame = 2
Query: 536 PLEGTMHAYESHIIICSGH-EDWPKMIEAEEASIAQSLHNMCLGAGLIWTKQLAKAAAAEGKVAAPNRVKISACTEPSRGRPGYTDVIVYPEGLVYSLDPNDLDALQTFVKVQLA-DRKVATELKPVPVSYEKMVLVCTHASRDKRCGRAGPQVLEAMAKELESRGIREDQVAIRGSSHFGGHKYAGVLIIYPQ------GDWYGLVNKKNAACIIDKVVLGTSMMKANWRGNM 1213
PL GT+ YE H+ + +G + WP +E + T AK AAA + A + C + S G G DV+V+P + Y L P+D + FVK L+ D ++ T +P+ S+ V +CTH SRD RCG GP ++ A + + +G+ E V IRG SH GGHKYAG +IIY + GDWYG V+ + ++++ + G +++ WRG M
Sbjct: 37 PLAGTVKFYEQHVFLTAGDGKKWPAKVEKSTS-----------------TGLPAKLAAAVSQHAGAKKTNFMLC-DSSDGAEG--DVLVFPNMVKYRLQPSD--DVAAFVKSALSLDGEITTPSEPITGSH---VFICTHNSRDARCGYCGPLLVAAFKEAAKEKGLAES-VHIRGCSHTGGHKYAGNVIIYREREGKVEGDWYGYVSPADVTTLLEQHIQGGKIVEKLWRGRM 244
BLAST of mRNA_H-paniculata_contig11005.657.1 vs. uniprot
Match: A0A7S1TUK0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TUK0_9STRA) HSP 1 Score: 116 bits (290), Expect = 3.090e-24 Identity = 90/294 (30.61%), Postives = 129/294 (43.88%), Query Frame = 2
Query: 488 CEGCDCGLNGAAEPPGPLEGTMHAYESHIIICSGHED---WPKMIEAEEASIAQSLHNMCLGAGLIWTKQLAKAAAAEGKV-----------------------AAPNRVKISACTEPSRGRPG---YTDVIVYPEGLVYSLDPNDLDALQTFVKVQLADRKVATEL---KPVPVSYEKMVLVCTHASRDKRCGRAGPQVLEAMAKELESRGIR----------------------------------EDQVAIRGSSHFGGHKYAGVLIIYPQGDWYGLVNKKNAACIIDKVV 1171
C+GCD A E + GT AY H+++ +G W + IE E S AQ L G+I K+ A A P VK++A E + G YT+ YP G+ ++ A Q + L R L +P P+ ++K++LVCTHASRDKRCGRAGPQ+L M++ L RG+ +V +RG SH GGHK+AGV I+YP+ DWYG ++K NAA ++ +++
Sbjct: 47 CDGCDA----ADECASDILGTATAYHCHVLVATGVASDGLWNEKIEKVEGSFAQVLVGALKDLGMIAEKKKKDQEKAXXXXXXXXXXXXXXXXXXXXXLSPDAPAVPFAVKVTAVAEDATGGRNVLLYTNR--YPRGVRIRVEQTAAGA-QGLCEALLRSRDEGDALAPFQPEPLPWDKLILVCTHASRDKRCGRAGPQMLTHMSEALVKRGLGAGLPPDHPRHTHDPRGFLGAVASEISHRLAYGAPRPRVVLRGCSHIGGHKHAGVCIVYPEADWYGRISKANAAKLLARIL 333
BLAST of mRNA_H-paniculata_contig11005.657.1 vs. uniprot
Match: A0A7W1C6G9_9BACT (Sucrase ferredoxin n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7W1C6G9_9BACT) HSP 1 Score: 108 bits (270), Expect = 6.380e-23 Identity = 78/235 (33.19%), Postives = 116/235 (49.36%), Query Frame = 2
Query: 524 EPPG--PLEGTMHAYESHIIICSGHEDWPKMIEAEEASIAQSLHNMCLGAGLIWTKQLAKAAAAEGKVAAPNRVKISACTEPSRGRPGYTDVIVYPEGLVYSLDPNDLDALQTFVKVQLADRKVATELKPVPVSYEKM---VLVCTHASRDKRCGRAGPQVLEAMAKELESRGIREDQVAIRGSSHFGGHKYAGVLIIYPQGDWYGLVNKKNAACIIDKVVLGTSMMKANWRGNM 1213
EP G PL GT+ Y H+++C+G WP IE E + + ++ A E P K++A E S G PG D++V+PE + Y + +D T+ V LAD + E+ S V VC HA+RD+RCGR GP V+ A+ + + G+ + +R +SH GGHKYAG ++IYP G WYG V +A I+ + +++ RG M
Sbjct: 3 EPRGEWPLSGTVKPYGRHVLVCTGARSWPARIEEAEGLLGRMARDV--------------RALRETSATPP---KLTASDESSMG-PG-ADLLVFPESVRY----HGVDEA-TWPGV-LADHVIGGEVSTAAPSTPLTGVHVFVCVHAARDERCGRCGPPVIAALREACAAEGMAD--ATVRATSHVGGHKYAGNVLIYPSGAWYGYVRPADARRIVRDHIREGRIVEELCRGRM 210
BLAST of mRNA_H-paniculata_contig11005.657.1 vs. uniprot
Match: A0A835YVK0_9STRA (Sucrase/ferredoxin-like-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVK0_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.440e-22 Identity = 64/160 (40.00%), Postives = 92/160 (57.50%), Query Frame = 2
Query: 728 PNRVKISACTEPSR--GRPGYTDVIVYPEGLVYSLDPNDLDALQTFVKVQLADRKVA-TELKPVPVSYEKMVLVCTHASRDKRCGRAGPQV---------LEAMAKELESRGIREDQVAIRGSSHFGGHKYAGVLIIYPQGDWYGLVNKKNAACIIDKVV 1171
P+RV+I+AC P+ G D+++YPE L+ + L+ + A +A + +PV YE +VLVCTH SR +RCGR GPQV +EAM + + + Q++I SH GGHK+AGV I++PQG WYG + K+NAA I+D V
Sbjct: 39 PSRVRITACALPTGPLAPAGTVDMMLYPEALLCTRSTEQRATLEQSREAAAAAAALARVGIPTMPVPYEHLVLVCTHNSRSRRCGRTGPQVQPLQINMKVIEAMQERKAQLRMSDTQLSIVACSHIGGHKHAGVCIVWPQGHWYGRLTKENAADIVDTCV 198 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11005.657.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11005.657.1 >prot_H-paniculata_contig11005.657.1 ID=prot_H-paniculata_contig11005.657.1|Name=mRNA_H-paniculata_contig11005.657.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=517bp MRVLLQVTARTPATPTLRQRCSYHATTIHDPRLRLDPAFTNHQPSDKQEQback to top mRNA from alignment at H-paniculata_contig11005:1211..7509- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11005.657.1 ID=mRNA_H-paniculata_contig11005.657.1|Name=mRNA_H-paniculata_contig11005.657.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6299bp|location=Sequence derived from alignment at H-paniculata_contig11005:1211..7509- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11005:1211..7509- >mRNA_H-paniculata_contig11005.657.1 ID=mRNA_H-paniculata_contig11005.657.1|Name=mRNA_H-paniculata_contig11005.657.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3102bp|location=Sequence derived from alignment at H-paniculata_contig11005:1211..7509- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |