prot_H-paniculata_contig11004.656.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11004.656.1
Unique Nameprot_H-paniculata_contig11004.656.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length159
Homology
BLAST of mRNA_H-paniculata_contig11004.656.1 vs. uniprot
Match: D7G5V3_ECTSI (GTPase activating protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5V3_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 5.960e-82
Identity = 123/159 (77.36%), Postives = 142/159 (89.31%), Query Frame = 0
Query:    1 VQYCQGINYICALFLLYMPEENAFWLLVASMQRPRAPLRELFLPGMIKAQEFQFVVNSLTAKYCKSLNAQLLRYHLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDYKVFYRVCLALFKSVEVEAAKLDLEKMNILLRNMPNKVDAVEVRGRAVS 159
            VQYCQG+NYI +LFLLYMPEENAFW+LVA+M RP APLRELFLPGM+KAQEFQFV++SLT K+C+ L+ Q+L ++LTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLED+KVFYRVCLALFKSVE +AA LDLE +N+LLRNMP  VDA ++   A S
Sbjct:  125 VQYCQGVNYITSLFLLYMPEENAFWMLVATMNRPCAPLRELFLPGMLKAQEFQFVMDSLTKKHCEKLSNQILAHNLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFKSVEGKAAALDLENLNLLLRNMPPNVDAQQILDIAAS 283          
BLAST of mRNA_H-paniculata_contig11004.656.1 vs. uniprot
Match: A0A6H5L2H2_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H2_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 1.970e-78
Identity = 125/159 (78.62%), Postives = 142/159 (89.31%), Query Frame = 0
Query:    1 VQYCQGINYICALFLLYMPEENAFWLLVASMQRPRAPLRELFLPGMIKAQEFQFVVNSLTAKYCKSLNAQLLRYHLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDYKVFYRVCLALFKSVEVEAAKLDLEKMNILLRNMPNKVDAVEVRGRAVS 159
            VQYCQGINYI +LFLLYMPEENAFW+LVASM RP APLRELFLPGM+KAQEFQFV++SLT K+C+ L+ Q+L ++LTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLED+KVFYRVCLALFKSVE +AA LDLE +N+LLRNMP  VDA ++   A S
Sbjct:  478 VQYCQGINYITSLFLLYMPEENAFWMLVASMNRPCAPLRELFLPGMLKAQEFQFVMDSLTKKHCEKLSNQILAHNLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFKSVEGKAAALDLENLNLLLRNMPPNVDAQQILDIAAS 636          
BLAST of mRNA_H-paniculata_contig11004.656.1 vs. uniprot
Match: A0A835YV67_9STRA (Rab-GTPase-TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV67_9STRA)

HSP 1 Score: 185 bits (469), Expect = 2.980e-52
Identity = 88/144 (61.11%), Postives = 108/144 (75.00%), Query Frame = 0
Query:    6 GINYICALFLLYMPEENAFWLLVASMQRPRAPLRELFLPGMIKAQEFQFVVNSLTAKYCKSLNAQLLRYHLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDYKVFYRVCLALFKSVEVEAAKLDLEKMNILLRNMPNKVD 149
            GINYI ALFLLYMPEE AFW+LV  M RP+APLRELFLPGM+KA+EF  V++SLT K+   L   L ++ + P MYA  WF+T FTQ FPY+L TR WD+FL ED+K+ YRVCLALFK VE E   LDLE+ N+++R +P   D
Sbjct:  466 GINYIAALFLLYMPEEEAFWMLVCVMHRPQAPLRELFLPGMLKAREFNHVMDSLTEKFVPKLFRHLQKHDIQPTMYAHPWFITCFTQAFPYELCTRTWDVFLEEDWKIMYRVCLALFKHVETEVCSLDLEQGNLVMRRLPAAAD 609          
BLAST of mRNA_H-paniculata_contig11004.656.1 vs. uniprot
Match: A0A8J5IBD6_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IBD6_9STRA)

HSP 1 Score: 135 bits (340), Expect = 8.870e-36
Identity = 73/153 (47.71%), Postives = 90/153 (58.82%), Query Frame = 0
Query:    1 VQYCQGINYICALFLLYMPEENAFWLLVASMQRPRAPLRELFLPGMIKAQEFQFVVNSLTAKYCKSLNAQLLRYHLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDYKVFYRVCLALFKSVEVEAAKLDLEKMNILLRNMPNKVDAVEV 153
            V YCQG+ ++ A+FL YMPE+ AFWLLVA +   R  L +L+ P M K  E  FV   L  +    L+A L    L P MY TQWFLT FT  FP++ VTRVWD FL E +KV YRV LAL K  +        E +    R++PNKVD  EV
Sbjct:  149 VGYCQGMGFLSAMFLCYMPEQQAFWLLVACLNHKRYGLADLYRPRMPKVPEVTFVFEGLFKQLMPQLSAHLENEGLHPTMYLTQWFLTLFTYNFPFEFVTRVWDTFLHEGWKVIYRVALALMKISQKTLLSSKFEIIMEYFRDLPNKVDTDEV 301          
BLAST of mRNA_H-paniculata_contig11004.656.1 vs. uniprot
Match: A0A7S1G1I4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G1I4_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.200e-35
Identity = 70/156 (44.87%), Postives = 98/156 (62.82%), Query Frame = 0
Query:    3 YCQGINYICALFLLYMPEENAFWLLVASMQRPRAPLRELFLPGMIKAQEFQFVVNSLTAKYCKSLNAQLLRYHLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDYKVFYRVCLALFKSVEVEAAKLDLEKMNILLRNMPNKVDAVEVRGRAV 158
            YCQG+N++ A+FL+YM EE+AFW+LV  M      LREL+  GMIK+Q   +V + L   Y   LN      ++   M+ATQWFLT ++  F +DLVTR+WD+FL+E +K+ YRV LAL K  E E  +++ E +   LR MP   D  E+  RA+
Sbjct:  252 YCQGMNFVTAMFLMYMSEEDAFWMLVHVMNFEPCKLRELYTVGMIKSQRVLYVGSQLIKHYLPKLNRHFETENICYNMFATQWFLTIYSNSFSFDLVTRIWDIFLVEGWKIVYRVMLALLKKFERELLEMNFEAIMKFLRYMPKLADGPEIIERAL 407          
BLAST of mRNA_H-paniculata_contig11004.656.1 vs. uniprot
Match: A0A0P1B616_PLAHL (Plant adhesion molecule 1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B616_PLAHL)

HSP 1 Score: 135 bits (340), Expect = 1.840e-35
Identity = 73/153 (47.71%), Postives = 90/153 (58.82%), Query Frame = 0
Query:    1 VQYCQGINYICALFLLYMPEENAFWLLVASMQRPRAPLRELFLPGMIKAQEFQFVVNSLTAKYCKSLNAQLLRYHLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDYKVFYRVCLALFKSVEVEAAKLDLEKMNILLRNMPNKVDAVEV 153
            V YCQG+ +I A+FL YMPE+ AFWLLVA +   R  L +L+ P M K  E  +V   L  +    L+  L    L P MY TQWFLT FT  FP+DLVTRVWD FL E +KV YRV LAL K  +        E +    R++PNKVD  +V
Sbjct:  185 VGYCQGMGFISAMFLCYMPEQQAFWLLVACLNHKRYGLADLYRPRMPKVLEVTYVFQGLLKQQMPHLSTHLENEGLHPTMYLTQWFLTLFTYNFPFDLVTRVWDAFLHEGWKVIYRVALALMKISQKILMNSKFESIMEYFRDLPNKVDTDDV 337          
BLAST of mRNA_H-paniculata_contig11004.656.1 vs. uniprot
Match: A0A3F2RLQ9_9STRA (Rab-GAP TBC domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RLQ9_9STRA)

HSP 1 Score: 135 bits (341), Expect = 2.120e-35
Identity = 71/153 (46.41%), Postives = 91/153 (59.48%), Query Frame = 0
Query:    1 VQYCQGINYICALFLLYMPEENAFWLLVASMQRPRAPLRELFLPGMIKAQEFQFVVNSLTAKYCKSLNAQLLRYHLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDYKVFYRVCLALFKSVEVEAAKLDLEKMNILLRNMPNKVDAVEV 153
            V YCQG+ ++ A+FL YMPE+ AFWLLVA +   R  L +L+ P M K  E  FV   L  +    L+A L    L P MY TQWFLT FT  FP++ VTRVWD FL E +K+ +RV LAL K+ +        E +    R +PN+VDA EV
Sbjct:  211 VGYCQGMGFLSAMFLCYMPEQQAFWLLVACLNHKRYGLADLYRPRMPKVPEVTFVFEGLFKQLMPQLSAHLENEGLHPTMYLTQWFLTLFTYNFPFEFVTRVWDAFLHEGWKIIFRVALALLKTSQKTLLSSKFEAIMEYFRELPNRVDAEEV 363          
BLAST of mRNA_H-paniculata_contig11004.656.1 vs. uniprot
Match: A0A835Z8H8_9STRA (Rab-GTPase-TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H8_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.130e-35
Identity = 78/170 (45.88%), Postives = 99/170 (58.24%), Query Frame = 0
Query:    5 QGINYICALFLLYMPEENAFWLL----------------------VASMQRPRAPLRELFLPGMIKAQEFQF--VVNSLTAKYCKSLNAQLLRYHLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDYKVFYRVCLALFKSVEVEAAKLDLEKMNILLRNMPNKVDA 150
            +GINYI ALFLLYM EE AFWLL                      +   ++ +  L  L + G++    F F  V++ L  K+   L+  L    + P MYA  WF+T FTQ FPYDLVTRVWD+FL ED+K+ YRVCLALFKSVE E   LDLE+ N++LR +P   DA
Sbjct:  458 EGINYIAALFLLYMTEEEAFWLLQKDEAGHQQLVEGQQPEKVEEGMDDQEKQQENLYRLLVTGLVFLLRFVFHYVMDGLALKFTPRLHNHLKSNDIDPTMYAHPWFMTCFTQSFPYDLVTRVWDIFLKEDWKIMYRVCLALFKSVEDEVCALDLERANMVLRKLPAAADA 627          
BLAST of mRNA_H-paniculata_contig11004.656.1 vs. uniprot
Match: A0A225W6Z9_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W6Z9_9STRA)

HSP 1 Score: 134 bits (336), Expect = 6.870e-35
Identity = 71/152 (46.71%), Postives = 90/152 (59.21%), Query Frame = 0
Query:    1 VQYCQGINYICALFLLYMPEENAFWLLVASMQRPRAPLRELFLPGMIKAQEFQFVVNSLTAKYCKSLNAQLLRYHLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDYKVFYRVCLALFKSVEVEAAKLDLEKMNILLRNMPNKVDAVE 152
            V YCQG+ ++ A+FL YMPE+ AFWLLVA +   R  L +L+ P M K  E  FV   L  +Y   L+A L    L P MY TQWFLT FT  FP++ VTRVWD FL E +KV YRV LAL K  +        E +    R++PNKV  ++
Sbjct:  198 VGYCQGMGFLSAMFLCYMPEQQAFWLLVACLNHKRYGLADLYRPRMPKVPEVTFVFEGLFKQYMPQLSAHLESEGLHPTMYLTQWFLTLFTYNFPFEFVTRVWDAFLHEGWKVIYRVALALLKISQKTLLSSKFEAIMDHFRDLPNKVRGLD 349          
BLAST of mRNA_H-paniculata_contig11004.656.1 vs. uniprot
Match: D0MU62_PHYIT (Rab-GAP TBC domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=D0MU62_PHYIT)

HSP 1 Score: 133 bits (335), Expect = 1.140e-34
Identity = 71/155 (45.81%), Postives = 90/155 (58.06%), Query Frame = 0
Query:    1 VQYCQGINYICALFLLYMPEENAFWLLVASMQRPRAPLRELFLPGMIKAQEFQFVVNSLTAKYCKSLNAQLLRYHLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDYKVFYRVCLALFKSVEVEAAKLDLEKMNILLRNMPNKVDAVEVRG 155
            V YCQG+ ++ A+FL YMPE+ AFWLLVA +   R  L +L+ P M K  E  F+   L  +    L+A L    L P MY TQWFLT FT  FP++ VTRVWD FL E +KV YRV LAL K  +        E +    R +PNKV A++  G
Sbjct:  202 VGYCQGMGFLTAMFLCYMPEQQAFWLLVACLNHKRYGLADLYRPRMPKVPEVTFIFEGLFKQLMPQLSAHLENEGLHPTMYLTQWFLTLFTYNFPFEFVTRVWDAFLHEGWKVIYRVALALMKLSQKTLLSSKFELIMEYFRELPNKVRALKAPG 356          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11004.656.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5V3_ECTSI5.960e-8277.36GTPase activating protein n=1 Tax=Ectocarpus silic... [more]
A0A6H5L2H2_9PHAE1.970e-7878.62Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A835YV67_9STRA2.980e-5261.11Rab-GTPase-TBC domain-containing protein n=1 Tax=T... [more]
A0A8J5IBD6_9STRA8.870e-3647.71Rab-GAP TBC domain-containing protein n=1 Tax=Phyt... [more]
A0A7S1G1I4_9STRA1.200e-3544.87Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A0P1B616_PLAHL1.840e-3547.71Plant adhesion molecule 1 n=1 Tax=Plasmopara halst... [more]
A0A3F2RLQ9_9STRA2.120e-3546.41Rab-GAP TBC domain-containing protein n=3 Tax=Phyt... [more]
A0A835Z8H8_9STRA2.130e-3545.88Rab-GTPase-TBC domain-containing protein n=1 Tax=T... [more]
A0A225W6Z9_9STRA6.870e-3546.71Rab-GAP TBC domain-containing protein n=1 Tax=Phyt... [more]
D0MU62_PHYIT1.140e-3445.81Rab-GAP TBC domain-containing protein n=10 Tax=Phy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainSMARTSM00164tbc_4coord: 1..133
e-value: 0.0029
score: -6.4
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 1..125
e-value: 7.7E-32
score: 110.7
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 1..110
score: 20.462
NoneNo IPR availableGENE3D1.10.8.270coord: 1..37
e-value: 1.3E-9
score: 39.8
NoneNo IPR availableGENE3D1.10.472.80coord: 38..157
e-value: 1.2E-30
score: 108.3
NoneNo IPR availablePANTHERPTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINcoord: 1..144
NoneNo IPR availablePANTHERPTHR22957:SF491coord: 1..144
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 45..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11004contigH-paniculata_contig11004:5292..8297 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11004.656.1mRNA_H-paniculata_contig11004.656.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11004 5292..8297 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11004.656.1 ID=prot_H-paniculata_contig11004.656.1|Name=mRNA_H-paniculata_contig11004.656.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=159bp
VQYCQGINYICALFLLYMPEENAFWLLVASMQRPRAPLRELFLPGMIKAQ
EFQFVVNSLTAKYCKSLNAQLLRYHLTPAMYATQWFLTAFTQRFPYDLVT
RVWDMFLLEDYKVFYRVCLALFKSVEVEAAKLDLEKMNILLRNMPNKVDA
VEVRGRAVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR035969Rab-GTPase_TBC_sf