prot_H-paniculata_contig24215.6560.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24215.6560.1
Unique Nameprot_H-paniculata_contig24215.6560.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length93
Homology
BLAST of mRNA_H-paniculata_contig24215.6560.1 vs. uniprot
Match: D7FH37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH37_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 1.690e-20
Identity = 53/89 (59.55%), Postives = 63/89 (70.79%), Query Frame = 0
Query:    1 MENVRQIAKKDADGARLYAVQKFAKQARWCLFLLDVADNLERAVESAKEG---GAAGASLDTLLEGVEMTSDQVKILLRREKMNYYGSV 86
            MENVR IAKKDA+ ARLYAVQKFAKQ      LLDVADNLERA+ SAKE    G   +S D LL+GVEMTS+++  + R + +  YG V
Sbjct:  117 MENVRSIAKKDAESARLYAVQKFAKQ------LLDVADNLERAIASAKEAEGEGGGDSSHDVLLQGVEMTSNELTKVFRSQGLEKYGEV 199          
BLAST of mRNA_H-paniculata_contig24215.6560.1 vs. uniprot
Match: A0A835ZC72_9STRA (GrpE nucleotide exchange factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC72_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 5.370e-13
Identity = 41/85 (48.24%), Postives = 53/85 (62.35%), Query Frame = 0
Query:    1 MENVRQIAKKDADGARLYAVQKFAKQARWCLFLLDVADNLERAVESAKEGGAAGASLDTLLEGVEMTSDQVKILLRREKMNYYGS 85
            MENVR IA++DA+ AR +AVQ FAK       LLDVADNL RA+E+  + G    +L  LLEGVEMT  Q+      + +  YG+
Sbjct:   59 MENVRAIARRDAETARKFAVQGFAKG------LLDVADNLSRAIEAVPKEGEKDPALTVLLEGVEMTEAQLHKAFAAQNLERYGA 137          
BLAST of mRNA_H-paniculata_contig24215.6560.1 vs. uniprot
Match: A0A7S4DBF8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBF8_HETAK)

HSP 1 Score: 69.3 bits (168), Expect = 5.190e-12
Identity = 45/92 (48.91%), Postives = 56/92 (60.87%), Query Frame = 0
Query:    1 MENVRQIAKKDADGARLYAVQKFAKQARWCLFLLDVADNLERAVESAKEGGAAG-ASLDTLLEGVEMTSDQVKILLRREKMNYYGSV--PFE 89
            MENVR IA++D DGA+ YAVQ FAK       LLDVADNLERA+ +     AAG   L  L EGV+MT  Q+  +     +  YG+V  PF+
Sbjct:  151 MENVRAIARRDVDGAKTYAVQGFAKG------LLDVADNLERALAAVPAAAAAGDPHLRALQEGVQMTDAQLAKVFAAHHLAKYGAVGDPFD 236          
BLAST of mRNA_H-paniculata_contig24215.6560.1 vs. uniprot
Match: A0A4D9CVC4_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVC4_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 3.320e-10
Identity = 43/96 (44.79%), Postives = 57/96 (59.38%), Query Frame = 0
Query:    1 MENVRQIAKKDADGARLYAVQKFAKQARWCLFLLDVADNLERAV-----ESAKEGGAAGAS-------LDTLLEGVEMTSDQVKILLRREKMNYYG 84
            MENVR IA++DA  A+ +A+Q FAKQ      LLDVADNL RA+     E+ +EGG AG         L TL+EGV MT  Q++ +    ++  YG
Sbjct:  131 MENVRTIARRDAASAKQFALQSFAKQ------LLDVADNLNRALASVPKEALEEGGEAGGKEGGGSSLLATLVEGVAMTDAQLQKVFAANQIVQYG 220          
BLAST of mRNA_H-paniculata_contig24215.6560.1 vs. uniprot
Match: UPI000C1D0B07 (grpE protein homolog 2, mitochondrial-like isoform X1 n=2 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D0B07)

HSP 1 Score: 61.2 bits (147), Expect = 5.840e-9
Identity = 41/81 (50.62%), Postives = 49/81 (60.49%), Query Frame = 0
Query:    1 MENVRQIAKKDADGARLYAVQKFAKQARWCLFLLDVADNLERAVESAKEG--------GAAGA--SLDTLLEGVEMTSDQV 71
            MENV+   K++AD A+ +A+Q FAK       LLDVADNL RA  +AKE         GA GA   L TLLEGVEMT  Q+
Sbjct:  192 MENVKDRTKREADNAKKFAIQNFAKS------LLDVADNLGRASSAAKESFSKIETSNGAPGAVTQLKTLLEGVEMTEKQL 266          
BLAST of mRNA_H-paniculata_contig24215.6560.1 vs. uniprot
Match: A0A1X4NG35_9PROT (Protein GrpE n=4 Tax=Thalassospira TaxID=168934 RepID=A0A1X4NG35_9PROT)

HSP 1 Score: 59.7 bits (143), Expect = 8.420e-9
Identity = 32/66 (48.48%), Postives = 44/66 (66.67%), Query Frame = 0
Query:    2 ENVRQIAKKDADGARLYAVQKFAKQARWCLFLLDVADNLERAVESAKEGGAAGASLDTLLEGVEMT 67
            EN+R+ AKKD + +  YA+ KFA+       LLDV DNL RA+E+A +G     ++ TL+EGVEMT
Sbjct:   54 ENIRRRAKKDVEDSANYAITKFARD------LLDVGDNLRRALEAAGDGANQNEAMKTLIEGVEMT 113          
BLAST of mRNA_H-paniculata_contig24215.6560.1 vs. uniprot
Match: D8QQ93_SELML (GrpE protein homolog (Fragment) n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8QQ93_SELML)

HSP 1 Score: 58.2 bits (139), Expect = 1.760e-8
Identity = 39/98 (39.80%), Postives = 59/98 (60.20%), Query Frame = 0
Query:    1 MENVRQIAKKDADGARLYAVQKFAKQARWCLFLLDVADNLERAVESA---KEGGAAGASLDTLLEGVEMTSDQVKILLRR---EKMNYYGSVPFEKNI 92
            +EN R+ AK++ + +R +AVQ F+K       LLDV+DNL RA+ S    K+   A   LDTLL GV+MT  Q+  +L++   E+ +  G  PF+ N+
Sbjct:   27 LENYRERAKREQESSRKFAVQSFSKD------LLDVSDNLSRALSSVGQPKDAEEAKKLLDTLLAGVKMTEKQLMQVLKKYGVERFDPTGE-PFDPNV 117          
BLAST of mRNA_H-paniculata_contig24215.6560.1 vs. uniprot
Match: A0A367XKC1_9PROT (Protein GrpE n=4 Tax=Thalassospira TaxID=168934 RepID=A0A367XKC1_9PROT)

HSP 1 Score: 58.9 bits (141), Expect = 1.940e-8
Identity = 31/66 (46.97%), Postives = 44/66 (66.67%), Query Frame = 0
Query:    2 ENVRQIAKKDADGARLYAVQKFAKQARWCLFLLDVADNLERAVESAKEGGAAGASLDTLLEGVEMT 67
            EN+R+ AKKD + +  YA+ KFA+       LLDV+DNL RA+E+  +G     ++ TL+EGVEMT
Sbjct:   69 ENIRRRAKKDVEDSANYAITKFARD------LLDVSDNLRRALEAVGDGAQQNEAMKTLIEGVEMT 128          
BLAST of mRNA_H-paniculata_contig24215.6560.1 vs. uniprot
Match: A0A5A7RE45_STRAF (GrpE protein homolog n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7RE45_STRAF)

HSP 1 Score: 59.7 bits (143), Expect = 2.040e-8
Identity = 40/99 (40.40%), Postives = 57/99 (57.58%), Query Frame = 0
Query:    1 MENVRQIAKKDADGARLYAVQKFAKQARWCLFLLDVADNLERAVESAKEG--------GAAGAS--LDTLLEGVEMTSDQVKILLRREKMNYYGSVPFE 89
            MEN ++  +++A+ A+ +A+Q FAK       LLDVADNL RA  +AKE          A+GA+  L TLLEGVEMT  Q+  + R+  +  Y  +  E
Sbjct:  180 MENTKERTRREAESAKKFAIQNFAKS------LLDVADNLGRASSAAKESFSKVDVSKDASGATQQLKTLLEGVEMTEKQLNEVFRKFGLEKYEPIDEE 272          
BLAST of mRNA_H-paniculata_contig24215.6560.1 vs. uniprot
Match: A0A2R5G7U4_9STRA (GrpE protein-like, mitochondrial n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G7U4_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.550e-8
Identity = 40/98 (40.82%), Postives = 54/98 (55.10%), Query Frame = 0
Query:    1 MENVRQIAKKDADGARLYAVQKFAKQARWCLFLLDVADNLERAVES----AKEGGAAGASLDTLLEGVEMTSDQVKILLRREKMNYYGSV--PFEKNI 92
            MENVRQ  +KD +    YA  KFAK       LLDVADNL RA+ES    A EG  A A L +L EG+ MT  ++  +     ++ +G    PF+ ++
Sbjct:  109 MENVRQRTQKDIESRTTYANSKFAKS------LLDVADNLTRALESVPQEALEGEDANAHLKSLYEGISMTEKELSKVFAANGISSFGEAGEPFDPHM 200          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24215.6560.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FH37_ECTSI1.690e-2059.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZC72_9STRA5.370e-1348.24GrpE nucleotide exchange factor n=1 Tax=Tribonema ... [more]
A0A7S4DBF8_HETAK5.190e-1248.91Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9CVC4_9STRA3.320e-1044.79Uncharacterized protein n=2 Tax=Nannochloropsis sa... [more]
UPI000C1D0B075.840e-950.62grpE protein homolog 2, mitochondrial-like isoform... [more]
A0A1X4NG35_9PROT8.420e-948.48Protein GrpE n=4 Tax=Thalassospira TaxID=168934 Re... [more]
D8QQ93_SELML1.760e-839.80GrpE protein homolog (Fragment) n=4 Tax=Selaginell... [more]
A0A367XKC1_9PROT1.940e-846.97Protein GrpE n=4 Tax=Thalassospira TaxID=168934 Re... [more]
A0A5A7RE45_STRAF2.040e-840.40GrpE protein homolog n=1 Tax=Striga asiatica TaxID... [more]
A0A2R5G7U4_9STRA2.550e-840.82GrpE protein-like, mitochondrial n=1 Tax=Hondaea f... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013805GrpE nucleotide exchange factor, coiled-coilGENE3D3.90.20.20coord: 1..77
e-value: 4.3E-13
score: 50.8
IPR013805GrpE nucleotide exchange factor, coiled-coilSUPERFAMILY58014Coiled-coil domain of nucleotide exchange factor GrpEcoord: 1..72
IPR000740GrpE nucleotide exchange factorPFAMPF01025GrpEcoord: 1..81
e-value: 3.9E-10
score: 39.6
IPR000740GrpE nucleotide exchange factorPANTHERPTHR21237GRPE PROTEINcoord: 1..84
NoneNo IPR availablePANTHERPTHR21237:SF23GRPE PROTEIN HOMOLOG, MITOCHONDRIALcoord: 1..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24215contigH-paniculata_contig24215:2352..3690 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24215.6560.1mRNA_H-paniculata_contig24215.6560.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24215 2352..3714 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24215.6560.1 ID=prot_H-paniculata_contig24215.6560.1|Name=mRNA_H-paniculata_contig24215.6560.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=93bp
MENVRQIAKKDADGARLYAVQKFAKQARWCLFLLDVADNLERAVESAKEG
GAAGASLDTLLEGVEMTSDQVKILLRREKMNYYGSVPFEKNI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013805GrpE_coiled_coil
IPR000740GrpE