mRNA_H-paniculata_contig11004.656.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11004.656.1 vs. uniprot
Match: D7G5V3_ECTSI (GTPase activating protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5V3_ECTSI) HSP 1 Score: 253 bits (645), Expect = 5.960e-82 Identity = 123/159 (77.36%), Postives = 142/159 (89.31%), Query Frame = 1 Query: 1 VQYCQGINYICALFLLYMPEENAFWLLVASMQRPRAPLRELFLPGMIKAQEFQFVVNSLTAKYCKSLNAQLLRYHLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDYKVFYRVCLALFKSVEVEAAKLDLEKMNILLRNMPNKVDAVEVRGRAVS 477 VQYCQG+NYI +LFLLYMPEENAFW+LVA+M RP APLRELFLPGM+KAQEFQFV++SLT K+C+ L+ Q+L ++LTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLED+KVFYRVCLALFKSVE +AA LDLE +N+LLRNMP VDA ++ A S Sbjct: 125 VQYCQGVNYITSLFLLYMPEENAFWMLVATMNRPCAPLRELFLPGMLKAQEFQFVMDSLTKKHCEKLSNQILAHNLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFKSVEGKAAALDLENLNLLLRNMPPNVDAQQILDIAAS 283
BLAST of mRNA_H-paniculata_contig11004.656.1 vs. uniprot
Match: A0A6H5L2H2_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H2_9PHAE) HSP 1 Score: 254 bits (649), Expect = 1.970e-78 Identity = 125/159 (78.62%), Postives = 142/159 (89.31%), Query Frame = 1 Query: 1 VQYCQGINYICALFLLYMPEENAFWLLVASMQRPRAPLRELFLPGMIKAQEFQFVVNSLTAKYCKSLNAQLLRYHLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDYKVFYRVCLALFKSVEVEAAKLDLEKMNILLRNMPNKVDAVEVRGRAVS 477 VQYCQGINYI +LFLLYMPEENAFW+LVASM RP APLRELFLPGM+KAQEFQFV++SLT K+C+ L+ Q+L ++LTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLED+KVFYRVCLALFKSVE +AA LDLE +N+LLRNMP VDA ++ A S Sbjct: 478 VQYCQGINYITSLFLLYMPEENAFWMLVASMNRPCAPLRELFLPGMLKAQEFQFVMDSLTKKHCEKLSNQILAHNLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFKSVEGKAAALDLENLNLLLRNMPPNVDAQQILDIAAS 636
BLAST of mRNA_H-paniculata_contig11004.656.1 vs. uniprot
Match: A0A835YV67_9STRA (Rab-GTPase-TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV67_9STRA) HSP 1 Score: 185 bits (469), Expect = 2.980e-52 Identity = 88/144 (61.11%), Postives = 108/144 (75.00%), Query Frame = 1 Query: 16 GINYICALFLLYMPEENAFWLLVASMQRPRAPLRELFLPGMIKAQEFQFVVNSLTAKYCKSLNAQLLRYHLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDYKVFYRVCLALFKSVEVEAAKLDLEKMNILLRNMPNKVD 447 GINYI ALFLLYMPEE AFW+LV M RP+APLRELFLPGM+KA+EF V++SLT K+ L L ++ + P MYA WF+T FTQ FPY+L TR WD+FL ED+K+ YRVCLALFK VE E LDLE+ N+++R +P D Sbjct: 466 GINYIAALFLLYMPEEEAFWMLVCVMHRPQAPLRELFLPGMLKAREFNHVMDSLTEKFVPKLFRHLQKHDIQPTMYAHPWFITCFTQAFPYELCTRTWDVFLEEDWKIMYRVCLALFKHVETEVCSLDLEQGNLVMRRLPAAAD 609
BLAST of mRNA_H-paniculata_contig11004.656.1 vs. uniprot
Match: A0A8J5IBD6_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IBD6_9STRA) HSP 1 Score: 135 bits (340), Expect = 8.870e-36 Identity = 73/153 (47.71%), Postives = 90/153 (58.82%), Query Frame = 1 Query: 1 VQYCQGINYICALFLLYMPEENAFWLLVASMQRPRAPLRELFLPGMIKAQEFQFVVNSLTAKYCKSLNAQLLRYHLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDYKVFYRVCLALFKSVEVEAAKLDLEKMNILLRNMPNKVDAVEV 459 V YCQG+ ++ A+FL YMPE+ AFWLLVA + R L +L+ P M K E FV L + L+A L L P MY TQWFLT FT FP++ VTRVWD FL E +KV YRV LAL K + E + R++PNKVD EV Sbjct: 149 VGYCQGMGFLSAMFLCYMPEQQAFWLLVACLNHKRYGLADLYRPRMPKVPEVTFVFEGLFKQLMPQLSAHLENEGLHPTMYLTQWFLTLFTYNFPFEFVTRVWDTFLHEGWKVIYRVALALMKISQKTLLSSKFEIIMEYFRDLPNKVDTDEV 301
BLAST of mRNA_H-paniculata_contig11004.656.1 vs. uniprot
Match: A0A7S1G1I4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G1I4_9STRA) HSP 1 Score: 137 bits (345), Expect = 1.200e-35 Identity = 70/156 (44.87%), Postives = 98/156 (62.82%), Query Frame = 1 Query: 7 YCQGINYICALFLLYMPEENAFWLLVASMQRPRAPLRELFLPGMIKAQEFQFVVNSLTAKYCKSLNAQLLRYHLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDYKVFYRVCLALFKSVEVEAAKLDLEKMNILLRNMPNKVDAVEVRGRAV 474 YCQG+N++ A+FL+YM EE+AFW+LV M LREL+ GMIK+Q +V + L Y LN ++ M+ATQWFLT ++ F +DLVTR+WD+FL+E +K+ YRV LAL K E E +++ E + LR MP D E+ RA+ Sbjct: 252 YCQGMNFVTAMFLMYMSEEDAFWMLVHVMNFEPCKLRELYTVGMIKSQRVLYVGSQLIKHYLPKLNRHFETENICYNMFATQWFLTIYSNSFSFDLVTRIWDIFLVEGWKIVYRVMLALLKKFERELLEMNFEAIMKFLRYMPKLADGPEIIERAL 407
BLAST of mRNA_H-paniculata_contig11004.656.1 vs. uniprot
Match: A0A0P1B616_PLAHL (Plant adhesion molecule 1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B616_PLAHL) HSP 1 Score: 135 bits (340), Expect = 1.840e-35 Identity = 73/153 (47.71%), Postives = 90/153 (58.82%), Query Frame = 1 Query: 1 VQYCQGINYICALFLLYMPEENAFWLLVASMQRPRAPLRELFLPGMIKAQEFQFVVNSLTAKYCKSLNAQLLRYHLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDYKVFYRVCLALFKSVEVEAAKLDLEKMNILLRNMPNKVDAVEV 459 V YCQG+ +I A+FL YMPE+ AFWLLVA + R L +L+ P M K E +V L + L+ L L P MY TQWFLT FT FP+DLVTRVWD FL E +KV YRV LAL K + E + R++PNKVD +V Sbjct: 185 VGYCQGMGFISAMFLCYMPEQQAFWLLVACLNHKRYGLADLYRPRMPKVLEVTYVFQGLLKQQMPHLSTHLENEGLHPTMYLTQWFLTLFTYNFPFDLVTRVWDAFLHEGWKVIYRVALALMKISQKILMNSKFESIMEYFRDLPNKVDTDDV 337
BLAST of mRNA_H-paniculata_contig11004.656.1 vs. uniprot
Match: A0A3F2RLQ9_9STRA (Rab-GAP TBC domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RLQ9_9STRA) HSP 1 Score: 135 bits (341), Expect = 2.120e-35 Identity = 71/153 (46.41%), Postives = 91/153 (59.48%), Query Frame = 1 Query: 1 VQYCQGINYICALFLLYMPEENAFWLLVASMQRPRAPLRELFLPGMIKAQEFQFVVNSLTAKYCKSLNAQLLRYHLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDYKVFYRVCLALFKSVEVEAAKLDLEKMNILLRNMPNKVDAVEV 459 V YCQG+ ++ A+FL YMPE+ AFWLLVA + R L +L+ P M K E FV L + L+A L L P MY TQWFLT FT FP++ VTRVWD FL E +K+ +RV LAL K+ + E + R +PN+VDA EV Sbjct: 211 VGYCQGMGFLSAMFLCYMPEQQAFWLLVACLNHKRYGLADLYRPRMPKVPEVTFVFEGLFKQLMPQLSAHLENEGLHPTMYLTQWFLTLFTYNFPFEFVTRVWDAFLHEGWKIIFRVALALLKTSQKTLLSSKFEAIMEYFRELPNRVDAEEV 363
BLAST of mRNA_H-paniculata_contig11004.656.1 vs. uniprot
Match: A0A835Z8H8_9STRA (Rab-GTPase-TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H8_9STRA) HSP 1 Score: 139 bits (350), Expect = 2.130e-35 Identity = 78/170 (45.88%), Postives = 99/170 (58.24%), Query Frame = 1 Query: 13 QGINYICALFLLYMPEENAFWLL----------------------VASMQRPRAPLRELFLPGMIKAQEFQF--VVNSLTAKYCKSLNAQLLRYHLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDYKVFYRVCLALFKSVEVEAAKLDLEKMNILLRNMPNKVDA 450 +GINYI ALFLLYM EE AFWLL + ++ + L L + G++ F F V++ L K+ L+ L + P MYA WF+T FTQ FPYDLVTRVWD+FL ED+K+ YRVCLALFKSVE E LDLE+ N++LR +P DA Sbjct: 458 EGINYIAALFLLYMTEEEAFWLLQKDEAGHQQLVEGQQPEKVEEGMDDQEKQQENLYRLLVTGLVFLLRFVFHYVMDGLALKFTPRLHNHLKSNDIDPTMYAHPWFMTCFTQSFPYDLVTRVWDIFLKEDWKIMYRVCLALFKSVEDEVCALDLERANMVLRKLPAAADA 627
BLAST of mRNA_H-paniculata_contig11004.656.1 vs. uniprot
Match: A0A225W6Z9_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W6Z9_9STRA) HSP 1 Score: 134 bits (336), Expect = 6.870e-35 Identity = 71/152 (46.71%), Postives = 90/152 (59.21%), Query Frame = 1 Query: 1 VQYCQGINYICALFLLYMPEENAFWLLVASMQRPRAPLRELFLPGMIKAQEFQFVVNSLTAKYCKSLNAQLLRYHLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDYKVFYRVCLALFKSVEVEAAKLDLEKMNILLRNMPNKVDAVE 456 V YCQG+ ++ A+FL YMPE+ AFWLLVA + R L +L+ P M K E FV L +Y L+A L L P MY TQWFLT FT FP++ VTRVWD FL E +KV YRV LAL K + E + R++PNKV ++ Sbjct: 198 VGYCQGMGFLSAMFLCYMPEQQAFWLLVACLNHKRYGLADLYRPRMPKVPEVTFVFEGLFKQYMPQLSAHLESEGLHPTMYLTQWFLTLFTYNFPFEFVTRVWDAFLHEGWKVIYRVALALLKISQKTLLSSKFEAIMDHFRDLPNKVRGLD 349
BLAST of mRNA_H-paniculata_contig11004.656.1 vs. uniprot
Match: D0MU62_PHYIT (Rab-GAP TBC domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=D0MU62_PHYIT) HSP 1 Score: 133 bits (335), Expect = 1.140e-34 Identity = 71/155 (45.81%), Postives = 90/155 (58.06%), Query Frame = 1 Query: 1 VQYCQGINYICALFLLYMPEENAFWLLVASMQRPRAPLRELFLPGMIKAQEFQFVVNSLTAKYCKSLNAQLLRYHLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDYKVFYRVCLALFKSVEVEAAKLDLEKMNILLRNMPNKVDAVEVRG 465 V YCQG+ ++ A+FL YMPE+ AFWLLVA + R L +L+ P M K E F+ L + L+A L L P MY TQWFLT FT FP++ VTRVWD FL E +KV YRV LAL K + E + R +PNKV A++ G Sbjct: 202 VGYCQGMGFLTAMFLCYMPEQQAFWLLVACLNHKRYGLADLYRPRMPKVPEVTFIFEGLFKQLMPQLSAHLENEGLHPTMYLTQWFLTLFTYNFPFEFVTRVWDAFLHEGWKVIYRVALALMKLSQKTLLSSKFELIMEYFRELPNKVRALKAPG 356 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11004.656.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11004.656.1 >prot_H-paniculata_contig11004.656.1 ID=prot_H-paniculata_contig11004.656.1|Name=mRNA_H-paniculata_contig11004.656.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=159bp VQYCQGINYICALFLLYMPEENAFWLLVASMQRPRAPLRELFLPGMIKAQback to top mRNA from alignment at H-paniculata_contig11004:5292..8297- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11004.656.1 ID=mRNA_H-paniculata_contig11004.656.1|Name=mRNA_H-paniculata_contig11004.656.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3006bp|location=Sequence derived from alignment at H-paniculata_contig11004:5292..8297- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11004:5292..8297- >mRNA_H-paniculata_contig11004.656.1 ID=mRNA_H-paniculata_contig11004.656.1|Name=mRNA_H-paniculata_contig11004.656.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=954bp|location=Sequence derived from alignment at H-paniculata_contig11004:5292..8297- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |