prot_H-paniculata_contig2420.6556.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2420.6556.1
Unique Nameprot_H-paniculata_contig2420.6556.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1065
Homology
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BLAST of mRNA_H-paniculata_contig2420.6556.1 vs. uniprot
Match: D7G8A2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8A2_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 8.800e-6
Identity = 121/462 (26.19%), Postives = 181/462 (39.18%), Query Frame = 0 
Query:  598 EGHAAVAKTVTDRAAGAIPGCVDVTLLLASPQRTRVIDGEEHDAVDGGCSNCGKRKNGPSRSGKGKTFTPPCGVKTGKRA-AGSVSNWLSGCDGGDQRVKRHPLQRAKRRWVAAVEKAASQAATTRKSVCIY-------------DVGTDSGVSTPKGIICFSPVSLFSSA-------WSSFDHHLPAGDSQTFSQTIRGDYVSDYHRDTRTRSSRCRTYGNLGGGAAQRVPVLAFTLRFGT---DCSGHEDLQSSKLPDLVVGPGNDRVKITPPTLPR------VSSAINAVTHTIGLAVNALLAVVSGGSSTDRHREVSPQYPPPLARPPVDDNCTVGLDPGDPQNLHLHERGKHEKRSTQHQVSEVEPGTVLRRQDESSALARPARGAPHAECSKENADRAERISQVADLAPEKLVQRVWHLERKALGLLRTSETRASAALASARAEAMAVRGELQLAE 1029
            +GHAAVA +V   A+  +PGC    LL  +P+R R           GG S       G  R+    +F+P        RA A + ++ + G   G +R +        + W   VE+AA QA +T K++C+              D     G S    ++ FSPV               +     P    +  +  ++ +YV     D  T S  C   G++G        +LA+ LR       C   +D + +  P   V P  + +   PP+ PR      +SSAINAV H +GLA+ A          TD   E+                       G P   +  +R +   R  +H  + +            + LA+              + R E + ++ D     L +RV  LE +A GL R SE R++AALA ARA+  A RGELQLAE
Sbjct:  461 KGHAAVAASVERLASAVVPGCEGSVLL--TPRRHR----------SGGSSRSAAGAGGDRRT----SFSPD------PRAWATATASRMHGAVDGSERFE------CGKAWARTVEEAAVQAYSTGKTMCVTMDLTPARSSQGCRDGNDGGGASRQSPVVYFSPVPAVLPVEPERLVNGENGGPGTPVSSGRMRAAELQREYV-----DCVTGS--CAMSGSVG-----TTGLLAWVLRLDAVEAACDDGDDEEGAGSPSDAVSPLTEAIS-EPPSPPRTHLPQCISSAINAVVHAVGLALFA----------TDTADEIH----------------------GRPARSNAFKRRRSSSRRARHVENRMHEVISSSTGPGETQLAK--------------SSREEELRRLRD-GTTALAERVKTLEGRAAGL-RASEARSAAALARARADVGATRGELQLAE 833
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2420.6556.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8A2_ECTSI8.800e-626.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 194..228
NoneNo IPR availableCOILSCoilCoilcoord: 292..319
NoneNo IPR availableCOILSCoilCoilcoord: 1011..1038
NoneNo IPR availableCOILSCoilCoilcoord: 241..268

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2420contigH-paniculata_contig2420:3262..6491 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2420.6556.1mRNA_H-paniculata_contig2420.6556.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2420 3262..8674 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2420.6556.1 ID=prot_H-paniculata_contig2420.6556.1|Name=mRNA_H-paniculata_contig2420.6556.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1065bp
MRAHGQRKHVTTTTTTTTTTTTTTTHLGERSGMQARSAQDTGTDLVSDTT
TRLRFAVATSDVFTARSDARSYKNGDADTRAPLPSSSGGVPYRQQLESTL
DLVVSRAAGPPFSSLEFSLAVQAAALLGQALDRVRALTKMRETELALEDA
FQGMEEASAAVSALVEEREKRSKVETQREDAWRMAAAREDNLRAAAMEGE
LARIRAKAEEQDQKRQREAETLRAAHQEAMREVEKTRGLEYRRLSDEITE
LRRRLGDVEEQQPQQQQQQKVQSEMQHESASNVSLGEALSAAEQALQRAE
DGELEQERLRAEMIELKRQLAVVGESVRAVVGVAGDITRAAARSRRKRGF
VHMGEDAGHIDDDAERHATERELIDMVEGVARTELGCCFSRVELVAAAEV
VSQSSEVAKDAVSRVEMSTSPPDTGVPNADQDKAMYDGDCGGGDGDDTCL
SELRIPVPDYSSYDLRAEKAVIVLRSGRAEGFTTIEGVLASMLTCCLGSA
LFTLRMIKAPLWWGEEAQRNSRSKGGLDSVAEKISSQESELAAMAAVGNA
RVDKGVPAIAAKRAERQTKALLHLLAGLHAAISSAAAGPAGAEVRWTEGH
AAVAKTVTDRAAGAIPGCVDVTLLLASPQRTRVIDGEEHDAVDGGCSNCG
KRKNGPSRSGKGKTFTPPCGVKTGKRAAGSVSNWLSGCDGGDQRVKRHPL
QRAKRRWVAAVEKAASQAATTRKSVCIYDVGTDSGVSTPKGIICFSPVSL
FSSAWSSFDHHLPAGDSQTFSQTIRGDYVSDYHRDTRTRSSRCRTYGNLG
GGAAQRVPVLAFTLRFGTDCSGHEDLQSSKLPDLVVGPGNDRVKITPPTL
PRVSSAINAVTHTIGLAVNALLAVVSGGSSTDRHREVSPQYPPPLARPPV
DDNCTVGLDPGDPQNLHLHERGKHEKRSTQHQVSEVEPGTVLRRQDESSA
LARPARGAPHAECSKENADRAERISQVADLAPEKLVQRVWHLERKALGLL
RTSETRASAALASARAEAMAVRGELQLAELERERLLQRLKEKDGGLQQKT
ERVVEKAYPRGGGQG
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