mRNA_H-paniculata_contig242.6554.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig242.6554.1 vs. uniprot
Match: D8LB76_ECTSI (Cyclic pyranopterin monophosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB76_ECTSI) HSP 1 Score: 273 bits (699), Expect = 2.560e-86 Identity = 144/186 (77.42%), Postives = 156/186 (83.87%), Query Frame = 2
Query: 266 GGHHLSTHVSPDGLTPRMVDVGSKATTRRTATARSRLRLPPEVSSKIETVGGQVVGKKGPVFTTAIVAGVQAAKRTSELIPFCHPLPIEDCRVELVLLRADGERWVAGEAGGGEAILAEQKGKGAVVEVECTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIVIEETALVFKTGGKRDFLR 823
GGH LSTHVS DG+TPRMVDVG KATTRRTATARSR+RLPP+V+SK+ETVGG+VVGKKGPVFTTAIVAGVQAAKRTSELIPFCHPLPIEDCRVEL L + GGE ++EV+CTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIV+E+TALV KTGGKRDF R
Sbjct: 63 GGHELSTHVSSDGVTPRMVDVGDKATTRRTATARSRIRLPPDVTSKMETVGGEVVGKKGPVFTTAIVAGVQAAKRTSELIPFCHPLPIEDCRVELSLKQ------------GGE-----------IIEVDCTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIVVEDTALVSKTGGKRDFSR 225
BLAST of mRNA_H-paniculata_contig242.6554.1 vs. uniprot
Match: A0A835ZDT1_9STRA (Cyclic pyranopterin monophosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT1_9STRA) HSP 1 Score: 223 bits (569), Expect = 5.590e-67 Identity = 115/184 (62.50%), Postives = 135/184 (73.37%), Query Frame = 2
Query: 272 HHLSTHVSPDGLTPRMVDVGSKATTRRTATARSRLRLPPEVSSKIETVGGQVVGKKGPVFTTAIVAGVQAAKRTSELIPFCHPLPIEDCRVELVLLRADGERWVAGEAGGGEAILAEQKGKGAVVEVECTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIVIEETALVFKTGGKRDFLR 823
H LSTHVS DG TP MVDVG K +RR+ATAR+R+RLPP+V +K+ VGG+VVGKKGP+FTTAI+AGV AK TS LIPFCHPLPIEDC+V++ L + V++++CTVRVTHKTGVEMEAM GASVAALTVYDMLKGLSHDIVIE T L+ K GGKR + R
Sbjct: 56 HDLSTHVSSDGTTPMMVDVGHKTASRRSATARTRVRLPPDVINKMNVVGGEVVGKKGPIFTTAIIAGVLGAKNTSSLIPFCHPLPIEDCKVDMELTEGNF-----------------------VIQIDCTVRVTHKTGVEMEAMTGASVAALTVYDMLKGLSHDIVIESTQLLAKEGGKRPYSR 216
BLAST of mRNA_H-paniculata_contig242.6554.1 vs. uniprot
Match: A0A5D6XL32_9STRA (Cyclic pyranopterin monophosphate synthase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL32_9STRA) HSP 1 Score: 199 bits (506), Expect = 7.130e-58 Identity = 111/207 (53.62%), Postives = 137/207 (66.18%), Query Frame = 2
Query: 227 PRALMS----SKTRGDNGGHHLSTHVSPDGLTPRMVDVGSKATTRRTATARSRLRLPPEVSSKIETVGGQ----VVGKKGPVFTTAIVAGVQAAKRTSELIPFCHPLPIEDCRVELVLLRADGERWVAGEAGGGEAILAEQKGKGAVVEVECTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIVIEETALVFKTGGKRDFLR 823
PR L S S + GD G +H++PDG TP+MVDVG+K+ TRR+ATARS LRLPP V +++ +GG + G KGP+ TAIVAGV AK+TS L+PFCHPLP++DC+V + + AD +E+ECTVRVTH+TGVEMEA+ GASVAAL VYDM K LSHDIVIE T LV K+GGKRDF R
Sbjct: 25 PRLLCSHFNSSSSEGDADGASKFSHLTPDGATPKMVDVGAKSVTRRSATARSTLRLPPAVLAELRRLGGGDGELLAGPKGPIGATAIVAGVLGAKQTSALLPFCHPLPLDDCQVAVRAVGADA------------------------IEIECTVRVTHRTGVEMEALTGASVAALCVYDMCKALSHDIVIERTWLVAKSGGKRDFQR 207
BLAST of mRNA_H-paniculata_contig242.6554.1 vs. uniprot
Match: A0A3F2RJA8_9STRA (Cyclic pyranopterin monophosphate synthase n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RJA8_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.660e-55 Identity = 105/184 (57.07%), Postives = 125/184 (67.93%), Query Frame = 2
Query: 284 THVSPDGLTPRMVDVGSKATTRRTATARSRLRLPPEVSSKI-----ETVGGQ-VVGKKGPVFTTAIVAGVQAAKRTSELIPFCHPLPIEDCRVELVLLRADGERWVAGEAGGGEAILAEQKGKGAVVEVECTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIVIEETALVFKTGGKRDF 817
THVS DG P MVDVG K TRR+ATARS +RLPP V +++ ET GG+ ++G KGP+ TTAI+AGV AK+TS LIPFCHPLP+EDC+V L ++ D +EVEC VRVTHKTGVEMEA+ GASVAAL VYDM K LSH+I+IE T L+ KTGGKRDF
Sbjct: 35 THVSADGSAPHMVDVGHKGVTRRSATARSTIRLPPSVLAELKRIGEETGGGEALIGPKGPIATTAIIAGVLGAKQTSSLIPFCHPLPLEDCQVRLEVVAPDA------------------------IEVECQVRVTHKTGVEMEALTGASVAALCVYDMCKALSHEIIIENTRLIEKTGGKRDF 194
BLAST of mRNA_H-paniculata_contig242.6554.1 vs. uniprot
Match: K3WVA7_GLOUD (Cyclic pyranopterin monophosphate synthase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVA7_GLOUD) HSP 1 Score: 191 bits (486), Expect = 1.770e-55 Identity = 106/188 (56.38%), Postives = 127/188 (67.55%), Query Frame = 2
Query: 290 VSPDGLTPRMVDVGSKATTRRTATARSRLRLPPEVSSKIETVGGQ--------VVGKKGPVFTTAIVAGVQAAKRTSELIPFCHPLPIEDCRVELVLLRADGERWVAGEAGGGEAILAEQKGKGAVVEVECTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIVIEETALVFKTGGKRDFLRRE 829
+SPDG P+MVDVG K TRRTATA++ +RLPP V S++ +GG +VG KGP+ TTAI+AGV AK+TS LIPFCHPLPIEDC++++ VAGE +E+ECTVRVTHKTGVEMEA+ GASVAAL VYDM K LSHDIVIE T L+ KTGGK DF +E
Sbjct: 1 MSPDGKAPQMVDVGHKHVTRRTATAKTTIRLPPIVLSELRRLGGSGDSSPSELLVGPKGPIGTTAIIAGVLGAKQTSSLIPFCHPLPIEDCQIQI---------HVAGEDR---------------IEIECTVRVTHKTGVEMEALTGASVAALCVYDMCKALSHDIVIENTRLIKKTGGKSDFAAKE 164
BLAST of mRNA_H-paniculata_contig242.6554.1 vs. uniprot
Match: A0A662YBD8_9STRA (Cyclic pyranopterin monophosphate synthase n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YBD8_9STRA) HSP 1 Score: 192 bits (487), Expect = 4.230e-55 Identity = 110/219 (50.23%), Postives = 136/219 (62.10%), Query Frame = 2
Query: 218 LRRPRALMSSKTRGDNGGHHLST--------------HVSPDGLTPRMVDVGSKATTRRTATARSRLRLPPEVSSKIETVGGQ-----VVGKKGPVFTTAIVAGVQAAKRTSELIPFCHPLPIEDCRVELVLLRADGERWVAGEAGGGEAILAEQKGKGAVVEVECTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIVIEETALVFKTGGKRDF 817
LRR +++ RG G LS+ H+S DG +P+MVDVGSK TRR+ATARS +RLPP V +++ +G + + G KGP+ TTAI+AGV AK+TS LIPFCHPLP+EDC+V L ++ D +E+EC VRVTHKTGVEMEA+ GASVAAL VYDM K LSH+IVIE T LV KTGGKRDF
Sbjct: 8 LRRLARSPTARLRGSTAGSPLSSLFSTSQSDDSWKFSHISSDGSSPQMVDVGSKRVTRRSATARSTIRLPPAVLDELKRIGREQGGELLTGPKGPIATTAIIAGVLGAKQTSSLIPFCHPLPLEDCQVRLQVVGRD------------------------TIEIECQVRVTHKTGVEMEALTGASVAALCVYDMCKALSHEIVIESTRLVEKTGGKRDF 202
BLAST of mRNA_H-paniculata_contig242.6554.1 vs. uniprot
Match: W2PYA6_PHYPN (Cyclic pyranopterin monophosphate synthase n=12 Tax=Phytophthora TaxID=4783 RepID=W2PYA6_PHYPN) HSP 1 Score: 190 bits (483), Expect = 8.500e-55 Identity = 100/179 (55.87%), Postives = 125/179 (69.83%), Query Frame = 2
Query: 284 THVSPDGLTPRMVDVGSKATTRRTATARSRLRLPPEVSSKIETVGG-QVVGKKGPVFTTAIVAGVQAAKRTSELIPFCHPLPIEDCRVELVLLRADGERWVAGEAGGGEAILAEQKGKGAVVEVECTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIVIEETALVFKTGGKRDF 817
THVS DG +P MVDVGSK TRR+ATARS +RLPP V ++++ +G Q++G KGP+ +TA++AGV AK+TS LIPFCHPLP++DC+V L + D ++VEC V+VTHKTGVEMEA+ GAS+AAL VYDM K LSH+IVIE T LV KTGGKRDF
Sbjct: 26 THVSRDGTSPHMVDVGSKKVTRRSATARSTIRLPPSVLAELQKLGDDQLMGPKGPIASTAVIAGVLGAKQTSSLIPFCHPLPLDDCQVRLKVTGPDA------------------------IDVECQVKVTHKTGVEMEALTGASIAALCVYDMCKALSHEIVIESTRLVEKTGGKRDF 180
BLAST of mRNA_H-paniculata_contig242.6554.1 vs. uniprot
Match: H3G7B1_PHYRM (Cyclic pyranopterin monophosphate synthase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G7B1_PHYRM) HSP 1 Score: 189 bits (480), Expect = 9.620e-55 Identity = 103/179 (57.54%), Postives = 126/179 (70.39%), Query Frame = 2
Query: 284 THVSPDGLTPRMVDVGSKATTRRTATARSRLRLPPEVSSKIETVGG-QVVGKKGPVFTTAIVAGVQAAKRTSELIPFCHPLPIEDCRVELVLLRADGERWVAGEAGGGEAILAEQKGKGAVVEVECTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIVIEETALVFKTGGKRDF 817
THV DG +PRMVDVG+K TRR+ATARS +RLPP V +++ VGG Q+VG KGP+ TTAI+AGV AK TS L+PFCHPLP+E+C+V+L ++ D + VEC V+VTHKTGVEMEA+ GASVAAL VYDM K LSH+IVIE+T LV K+GGKRDF
Sbjct: 3 THVGSDG-SPRMVDVGNKQVTRRSATARSTIRLPPAVLLELQRVGGEQLVGPKGPISTTAIIAGVMGAKSTSSLLPFCHPLPLENCQVQLHVVAPDA------------------------IHVECKVQVTHKTGVEMEALTGASVAALCVYDMCKALSHEIVIEDTRLVDKSGGKRDF 156
BLAST of mRNA_H-paniculata_contig242.6554.1 vs. uniprot
Match: A0A6A3FJV5_9STRA (Cyclic pyranopterin monophosphate synthase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FJV5_9STRA) HSP 1 Score: 186 bits (471), Expect = 5.570e-53 Identity = 101/180 (56.11%), Postives = 126/180 (70.00%), Query Frame = 2
Query: 284 THVSPDGLTPRMVDVGSKATTRRTATARSRLRLPPEVSSKIETVGG---QVVGKKGPVFTTAIVAGVQAAKRTSELIPFCHPLPIEDCRVELVLLRADGERWVAGEAGGGEAILAEQKGKGAVVEVECTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIVIEETALVFKTGGKRD 814
THVS DG +P+MVDVG K TRR+ATARSR+RLPP V ++++ + G +++G KGP+ +TA++AGV AK+TS L+PFCHPLP+EDC+V L ++ D ++VEC VRVTHKTGVEMEA+ GASVAAL VYDM K LSHDIVIE T LV KTGGKRD
Sbjct: 28 THVSGDG-SPQMVDVGRKQVTRRSATARSRIRLPPAVLTELQRLQGDGHELIGPKGPIASTAVIAGVLGAKQTSALLPFCHPLPLEDCQVRLEVVGPDA------------------------IDVECRVRVTHKTGVEMEALTGASVAALCVYDMCKALSHDIVIESTRLVEKTGGKRD 182
BLAST of mRNA_H-paniculata_contig242.6554.1 vs. uniprot
Match: A0A8K1CPY7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPY7_PYTOL) HSP 1 Score: 183 bits (464), Expect = 8.770e-52 Identity = 102/193 (52.85%), Postives = 124/193 (64.25%), Query Frame = 2
Query: 284 THVSPDGLTPRMVDVGSKATTRRTATARSRLRLPPEVSSKIETVGGQ-----------VVGKKGPVFTTAIVAGVQAAKRTSELIPFCHPLPIEDCRVELVLLRADGERWVAGEAGGGEAILAEQKGKGAVVEVECTVRVTHKTGVEMEAMMGASVAALTVYDMLKGLSHDIVIEETALVFKTGGKRDFLRRE 829
TH++ +G +P+MVDVG+K TRRTATARS +RLPPEV +++ VG + + G KGP+ TTAI+AGV AK+TS LIPFCHPLPIED ++ + D + +EC V VTHKTGVEMEA+ GASVAAL VYDM K LSHDIVIE T LV KTGGKRDF R+E
Sbjct: 31 THMNAEGTSPKMVDVGAKQPTRRTATARSIIRLPPEVLRELKRVGNKQHTSSSDDALALTGPKGPIGTTAIIAGVLGAKQTSSLIPFCHPLPIEDVQIRISTPSDDR------------------------IAIECEVSVTHKTGVEMEALTGASVAALCVYDMCKALSHDIVIERTELVAKTGGKRDFKRQE 199 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig242.6554.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig242.6554.1 >prot_H-paniculata_contig242.6554.1 ID=prot_H-paniculata_contig242.6554.1|Name=mRNA_H-paniculata_contig242.6554.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=231bp MAMRLALRKATSSSHTNSSRPTLRRPRALMSSKTRGDNGGHHLSTHVSPDback to top mRNA from alignment at H-paniculata_contig242:40130..42315+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig242.6554.1 ID=mRNA_H-paniculata_contig242.6554.1|Name=mRNA_H-paniculata_contig242.6554.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2186bp|location=Sequence derived from alignment at H-paniculata_contig242:40130..42315+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig242:40130..42315+ >mRNA_H-paniculata_contig242.6554.1 ID=mRNA_H-paniculata_contig242.6554.1|Name=mRNA_H-paniculata_contig242.6554.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1386bp|location=Sequence derived from alignment at H-paniculata_contig242:40130..42315+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |