mRNA_H-paniculata_contig24139.6534.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig24139.6534.1 vs. uniprot
Match: A0A6H5K0Z8_9PHAE (Rubis-subs-bind domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Z8_9PHAE) HSP 1 Score: 171 bits (432), Expect = 5.600e-48 Identity = 87/132 (65.91%), Postives = 98/132 (74.24%), Query Frame = 1
Query: 1 QVRQDWEEVHLPLIEVHPELLQGITFEDYVWAMSSIWSRAFDYSDHNETESDVCRRAMVPVINAANHDPSAGTSLADIISFEESSVGSETDKGGRHGEG-YLHVRAGRDYDTPGEQFFILYGRYSNAKLLYR 393
QVR+DWEE+HLPL+E HPE+L G+TFEDY+WAMSSIWSR+FDY + S RRAMVPVINAANHDPSA SL++II F+ G G R G G L V AGRDY EQFFILYGRYSNAKLLYR
Sbjct: 160 QVRKDWEELHLPLVEAHPEILGGVTFEDYLWAMSSIWSRSFDYQEPGSDGSSCSRRAMVPVINAANHDPSAAGSLSEIIEFQAQEGGLSIGTGDRGGAGGTLRVSAGRDYAAR-EQFFILYGRYSNAKLLYR 290
BLAST of mRNA_H-paniculata_contig24139.6534.1 vs. uniprot
Match: D8LD79_ECTSI (Rubis-subs-bind domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD79_ECTSI) HSP 1 Score: 164 bits (414), Expect = 1.500e-45 Identity = 85/132 (64.39%), Postives = 97/132 (73.48%), Query Frame = 1
Query: 1 QVRQDWEEVHLPLIEVHPELLQGITFEDYVWAMSSIWSRAFDYSDHNETESDVCRRAMVPVINAANHDPSAGTSLADIISFEESSVGSETDKG--GRHGEGYLHVRAGRDYDTPGEQFFILYGRYSNAKLLY 390
QVR+DWEE HLPL+E HPE+L G+TFEDY+WAMSSIWSR+FDY + +S RRAMVPVINAANHDPSA SL+++I F+ G G GR G L V AGRDY EQFFILYGRYSNAKLLY
Sbjct: 145 QVRKDWEEFHLPLVEAHPEILGGVTFEDYLWAMSSIWSRSFDYQEPGPDDSPCSRRAMVPVINAANHDPSAADSLSEMIEFQAQEGGLSMGIGEPGR-ARGTLRVSAGRDYAAR-EQFFILYGRYSNAKLLY 274
BLAST of mRNA_H-paniculata_contig24139.6534.1 vs. uniprot
Match: A0A835Z3C3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3C3_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.390e-27 Identity = 63/130 (48.46%), Postives = 82/130 (63.08%), Query Frame = 1
Query: 1 QVRQDWEEVHLPLIEVHPELLQGITFEDYVWAMSSIWSRAFDYSDHNETESDVCRRAMVPVINAANHDPSAGTSLADIISFEESSVGSETDKGGRHGEGYLHVRAGRDYDTPGEQFFILYGRYSNAKLLY 390
Q+R+DW+ + P+ E H +L G + +DY WA+S+IWSRAF Y+ N E +R +VPVINAANHDP+A LADI+ ++ + E + AGR Y GEQFFILYGRYSNAKLLY
Sbjct: 134 QIRRDWDAMIGPIAEAHAQLA-GASIDDYTWALSNIWSRAFCYTLDNGDE----QRCLVPVINAANHDPTAAGDLADIVHYDSA-------------ERCFRLTAGRAY-ANGEQFFILYGRYSNAKLLY 244
BLAST of mRNA_H-paniculata_contig24139.6534.1 vs. uniprot
Match: A0A7S4D6Z7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6Z7_HETAK) HSP 1 Score: 88.6 bits (218), Expect = 5.670e-18 Identity = 49/130 (37.69%), Postives = 70/130 (53.85%), Query Frame = 1
Query: 1 QVRQDWEEVHLPLIEVHPELLQGITFEDYVWAMSSIWSRAFDYSDHNETESDVCRRAMVPVINAANHDPSAGTSLADIISFEESSVGSETDKGGRHGEGYLHVRAGRDYDTPGEQFFILYGRYSNAKLLY 390
Q+++DW E+H PL H L G+T E Y WA+++++SRAF + RA+ PV+ NH P A T L D++ ++E +G L +R G+ Y G + LYGRYSNAKLLY
Sbjct: 153 QIKKDWTELHAPLAAAHSRLA-GLTEEKYRWALATVYSRAFGFVRRGRYT-----RALAPVMCFVNHHPEAATELDDVLEYDEE-------------QGALRMRCGKAY-AAGAECLALYGRYSNAKLLY 262
BLAST of mRNA_H-paniculata_contig24139.6534.1 vs. uniprot
Match: W7TTJ9_9STRA (Histone-lysine n-methyltransferase setd3 isoform a n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTJ9_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 2.670e-14 Identity = 43/130 (33.08%), Postives = 71/130 (54.62%), Query Frame = 1
Query: 1 QVRQDWEEVHLPLIEVHPELLQGITFEDYVWAMSSIWSRAFDYSDHNETESDVCRRAMVPVINAANHDPSAGTSLADIISFEESSVGSETDKGGRHGEGYLHVRAGRDYDTPGEQFFILYGRYSNAKLLY 390
++ +DW E+H L+ +P +L G+T EDY WA+S+IWSRA +S R + P ++ NH P+A + L D+I ++ ++ D L ++ + G++ ++ YG YSNAKLLY
Sbjct: 116 RILRDWHEIHAKLVLKYPSVLGGLTVEDYRWALSTIWSRAVGVE---RGDSHSYLRCLAPALDMCNHSPAAASCLEDLIKYD-----AQMDA--------LRLQQISPV-SRGQECYLFYGPYSNAKLLY 228
BLAST of mRNA_H-paniculata_contig24139.6534.1 vs. uniprot
Match: D0MR17_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MR17_PHYIT) HSP 1 Score: 71.6 bits (174), Expect = 5.340e-12 Identity = 49/133 (36.84%), Postives = 65/133 (48.87%), Query Frame = 1
Query: 1 QVRQDWEEVHLPLIEVHPE---LLQGITFEDYVWAMSSIWSRAFDYSDHNETESDVCRRAMVPVINAANHDPSAGTSLADIISFEESSVGSETDKGGRHGEGYLHVRAGRDYDTPGEQFFILYGRYSNAKLLY 390
Q+++D+E +H ++E PE LL +T EDY WAMS IWSRAF T R + P ++ NHD S L D +SF+E ET H + G I YG+YSNAKLL+
Sbjct: 140 QLQRDFENIHQAVVEDFPEVFALLPTLTLEDYTWAMSVIWSRAFGV-----TREKKYLRVLCPAMDMFNHDVSLRILLDDFVSFDE-----ETQMLTHHVPKEV---------AAGSALQISYGQYSNAKLLF 253
BLAST of mRNA_H-paniculata_contig24139.6534.1 vs. uniprot
Match: A0A8J5J916_9STRA (Rubis-subs-bind domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J916_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 6.360e-12 Identity = 46/133 (34.59%), Postives = 63/133 (47.37%), Query Frame = 1
Query: 1 QVRQDWEEVHLPLIEVHPEL---LQGITFEDYVWAMSSIWSRAFDYSDHNETESDVCRRAMVPVINAANHDPSAGTSLADIISFEESSVGSETDKGGRHGEGYLHVRAGRDYDTPGEQFFILYGRYSNAKLLY 390
Q+++D+E +H + E P++ L +T EDY WAMS IWSRAF T R + P ++ NHD S L D +SF+E E + + G I YG+YSNAKLLY
Sbjct: 1195 QLQRDFENIHQAVAEDFPDIFASLPTLTLEDYTWAMSVIWSRAFGV-----TRDAKYLRVLCPAMDMFNHDVSLRNPLDDFVSFDE--------------ETQMLTHHVPEEVATGSALHISYGQYSNAKLLY 1308
BLAST of mRNA_H-paniculata_contig24139.6534.1 vs. uniprot
Match: A0A3R7JTT6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JTT6_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 2.540e-11 Identity = 46/133 (34.59%), Postives = 62/133 (46.62%), Query Frame = 1
Query: 1 QVRQDWEEVHLPLIEVHPELLQG---ITFEDYVWAMSSIWSRAFDYSDHNETESDVCRRAMVPVINAANHDPSAGTSLADIISFEESSVGSETDKGGRHGEGYLHVRAGRDYDTPGEQFFILYGRYSNAKLLY 390
Q++ D+E +H + E PE+ +T EDYVWAMS IWSRAF S + +C P ++ NHD L D +S+ E + H A + G I YG+YSNAKLLY
Sbjct: 140 QLQHDFENIHQAIAEDFPEIFAAFPTLTMEDYVWAMSVIWSRAFGVSKDGKYLHVLC-----PAMDMFNHDVRLRNPLDDFVSYNEEK------------QAMTHHVA--EDGVSGTALHISYGQYSNAKLLY 253
BLAST of mRNA_H-paniculata_contig24139.6534.1 vs. uniprot
Match: A0A2P4XLP7_9STRA (Histone-lysine N-methyltransferase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XLP7_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 2.540e-11 Identity = 45/133 (33.83%), Postives = 64/133 (48.12%), Query Frame = 1
Query: 1 QVRQDWEEVHLPLIEVHPEL---LQGITFEDYVWAMSSIWSRAFDYSDHNETESDVCRRAMVPVINAANHDPSAGTSLADIISFEESSVGSETDKGGRHGEGYLHVRAGRDYDTPGEQFFILYGRYSNAKLLY 390
Q+++D+E +H + E PE+ L + EDY+WAMS IWSRAF S + + R + P ++ NHD + L D +SF+E E + G I YG+YSNAKLLY
Sbjct: 140 QLQRDFENIHQAVAEDFPEIFASLPTLKVEDYMWAMSVIWSRAFGVS-----KGEKYLRLLCPAMDMFNHDVTLRNPLDDFVSFDE--------------EKQMMTHQVPKEVMAGSPLHISYGQYSNAKLLY 253
BLAST of mRNA_H-paniculata_contig24139.6534.1 vs. uniprot
Match: A0A225WY65_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WY65_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 4.740e-11 Identity = 44/133 (33.08%), Postives = 64/133 (48.12%), Query Frame = 1
Query: 1 QVRQDWEEVHLPLIEVHPEL---LQGITFEDYVWAMSSIWSRAFDYSDHNETESDVCRRAMVPVINAANHDPSAGTSLADIISFEESSVGSETDKGGRHGEGYLHVRAGRDYDTPGEQFFILYGRYSNAKLLY 390
Q+++D++ +H + E PE+ L +T +DY WAMS IWSRAF S + R + P ++ NHD S L D +SF++ E + + G I YG+YSNAKLLY
Sbjct: 140 QLQRDFDNIHQAVTEDFPEIFAALPTLTVQDYTWAMSVIWSRAFGVSKGKKY-----LRVLCPAMDMFNHDVSLRNPLDDFVSFDQ--------------EKQMMTHHVPNEVPTGSPLHISYGQYSNAKLLY 253 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24139.6534.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig24139.6534.1 >prot_H-paniculata_contig24139.6534.1 ID=prot_H-paniculata_contig24139.6534.1|Name=mRNA_H-paniculata_contig24139.6534.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=132bp QVRQDWEEVHLPLIEVHPELLQGITFEDYVWAMSSIWSRAFDYSDHNETEback to top mRNA from alignment at H-paniculata_contig24139:407..3539- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig24139.6534.1 ID=mRNA_H-paniculata_contig24139.6534.1|Name=mRNA_H-paniculata_contig24139.6534.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3133bp|location=Sequence derived from alignment at H-paniculata_contig24139:407..3539- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig24139:407..3539- >mRNA_H-paniculata_contig24139.6534.1 ID=mRNA_H-paniculata_contig24139.6534.1|Name=mRNA_H-paniculata_contig24139.6534.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=792bp|location=Sequence derived from alignment at H-paniculata_contig24139:407..3539- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |