prot_H-paniculata_contig2413.6533.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2413.6533.1
Unique Nameprot_H-paniculata_contig2413.6533.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length244
Homology
BLAST of mRNA_H-paniculata_contig2413.6533.1 vs. uniprot
Match: D8LRJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRJ5_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 6.980e-60
Identity = 130/259 (50.19%), Postives = 165/259 (63.71%), Query Frame = 0
Query:    1 DDFDVDEARPPRRXXXRGGDVRPRPSEEQPAPWD-AGWFQDAQRLDERGMFGWVRNFYNSLFWYGGAL-EDSEQLPAMNFKDLLERFDESTGGQWARNSKAIVPPEELAAEQDYRWRPSARDAPVEA--------ETRRGGRAGTSSSN-TRGEGRRRRRVPEWVELEEDDTGGRA----RSKDGVRRRRVREEGDTVATEQLRRKQGQLVEREYAFQMDLEKVQERLGVVDATVELWLRRSAGMVTRGSQESDTEMLQ 244
            DD D D  RP RR    G D  P P+      WD A WF  AQ  ++ G++ W R+FYN+LFWYGGA  ED ++LPAMNF+DLLERFD   G Q +   + IVPPE+LAAEQD+ W+PS R+A   A         +R   R  T S   TR   RR RR  E  +L+ ++  GRA    R+  G  RR  R++GD VA  QLRRKQ QL ERE+  ++DLEKV++RL VVDATVELW+RRSAGM++RG  E+DT++LQ
Sbjct:   22 DDADFD-TRPRRRRSRDGIDAEPVPT-----GWDTAQWFSGAQEANQGGLYEWARSFYNTLFWYGGASSEDEDELPAMNFQDLLERFDLPAGEQSSTRPRPIVPPEDLAAEQDFLWQPSGREATGGATAAAEGTNRSRSKDRGSTVSGGATRSTRRRARREREERDLDWENV-GRAEREMRAAGGRGRREGRDDGDVVAIGQLRRKQRQLAEREHKCEVDLEKVRDRLDVVDATVELWMRRSAGMLSRGGSETDTDVLQ 273          
BLAST of mRNA_H-paniculata_contig2413.6533.1 vs. uniprot
Match: A0A6H5J5V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5V9_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 1.870e-57
Identity = 129/265 (48.68%), Postives = 161/265 (60.75%), Query Frame = 0
Query:    1 DDFDVDEARPPRRXXXRGGDVRPRPSEEQPAPWD-AGWFQDAQRLDERGMFGWVRNFYNSLFWYGGALEDSE-QLPAMNFKDLLERFDESTGGQWARNSKAIVPPEELAAEQDYRWRPSARDAPVEAE--------TRRGGRAGTSSSNTRGEGRRRRRVP------EW-----VELEEDDTGGRARSKDGVRRRRVREEGDTVATEQLRRKQGQLVEREYAFQMDLEKVQERLGVVDATVELWLRRSAGMVTRGSQESDTEMLQ 244
            DD DVD  RP RR      D  P P+      WD A WF  AQ  ++ G++ W R+FYN+LFWYGGA  + E +LPAMNF+DLLERFD   G Q +   + IVPPE+LAAEQD+RWRPS R+A   A         +R  GR  T+S    G  RRR R        +W      E E    GGR R + G       ++GD VA  QLRRKQ QL ERE+  ++DLEKV++RL VVDATVELW+RRSAGM++RG  E+DT++LQ
Sbjct:  174 DDADVD-TRPRRRRSRDDIDAEPVPT-----GWDTAQWFTGAQEANQGGLYEWARSFYNTLFWYGGASSEGEDELPAMNFQDLLERFDLPAGEQSSARPRPIVPPEDLAAEQDFRWRPSGREATGGATATAESTNWSRAKGRGSTASGGATGSSRRRARRERDERDLDWESVGRAEREMHAAGGRGRREGG-------DDGDVVAIGQLRRKQRQLAEREHKCEVDLEKVRDRLDVVDATVELWMRRSAGMLSRGGSETDTDVLQ 425          
BLAST of mRNA_H-paniculata_contig2413.6533.1 vs. uniprot
Match: A0A836C9G9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9G9_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 5.520e-13
Identity = 63/210 (30.00%), Postives = 85/210 (40.48%), Query Frame = 0
Query:   48 GMFGWVRNFYNSLFWYGGALEDSEQLPAMNFKDLLERFDES-----------------TGGQWARNSKAI---VPPEELAAEQD--YRWRPSA-RD-APVEAETRRGGRAGTSSSNTRGEGRRRRRVPEWVELEEDDTGGRARSKDGVRRRRVREEGDTVATEQLRRKQGQLVEREYAFQMDLEKVQERLGVVDATVELWLRRSAGMVTR 233
            G   W+R FYN+LFWYG A +D + LPAM+FKDL+E+++                   +GG+ A   + +   VPP E   + D  +RW P   RD AP    T+                   RR P                                    LRR+   L  +  A + DL KV ERL V+D T+ELWLRR   +  R
Sbjct:    2 GFMRWLRGFYNALFWYGAAFDDDDSLPAMDFKDLMEQYETEGDRRRARQRKGAAEAPLSGGRRAAGDRQVEYRVPPTEYQNDSDWKFRWNPGGDRDRAPKRTSTQPD-----------------RRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRRRARDLTAKRAALRRDLAKVDERLSVLDTTLELWLRRGRALAAR 194          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2413.6533.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LRJ5_ECTSI6.980e-6050.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J5V9_9PHAE1.870e-5748.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C9G9_9STRA5.520e-1330.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2413contigH-paniculata_contig2413:10233..19563 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2413.6533.1mRNA_H-paniculata_contig2413.6533.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2413 10233..19563 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2413.6533.1 ID=prot_H-paniculata_contig2413.6533.1|Name=mRNA_H-paniculata_contig2413.6533.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=244bp
DDFDVDEARPPRRRRRRGGDVRPRPSEEQPAPWDAGWFQDAQRLDERGMF
GWVRNFYNSLFWYGGALEDSEQLPAMNFKDLLERFDESTGGQWARNSKAI
VPPEELAAEQDYRWRPSARDAPVEAETRRGGRAGTSSSNTRGEGRRRRRV
PEWVELEEDDTGGRARSKDGVRRRRVREEGDTVATEQLRRKQGQLVEREY
AFQMDLEKVQERLGVVDATVELWLRRSAGMVTRGSQESDTEMLQ
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