prot_H-paniculata_contig2409.6522.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2409.6522.1
Unique Nameprot_H-paniculata_contig2409.6522.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length124
Homology
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BLAST of mRNA_H-paniculata_contig2409.6522.1 vs. uniprot
Match: D7G985_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G985_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 8.040e-9
Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 0 
Query:    1 MVDVMGRRCAYEGCGKHPRYGVPGSKKRKFCAQHAEAGMIDVGMT 45
            M+DV+ +RC + GC K P YG  GSKKR+FCAQH++ GM+ +  T
Sbjct:    1 MIDVVCKRCGHLGCMKRPSYGTDGSKKREFCAQHSQQGMVSMANT 45
[Close]
BLAST of mRNA_H-paniculata_contig2409.6522.1 vs. uniprot
Match: D7FMW7_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW7_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 3.010e-6
Identity = 23/39 (58.97%), Postives = 29/39 (74.36%), Query Frame = 0 
Query:    5 MGRRCAYE-GCGKHPRYGVPGSKKRKFCAQHAEAGMIDV 42
            MG++C Y  GC K   +GVPGSKKR+FCA HA  GM+D+
Sbjct:    1 MGKKCTYPAGCPKQALFGVPGSKKREFCALHAIQGMVDI 39
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2409.6522.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G985_ECTSI8.040e-953.33EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FMW7_ECTSI3.010e-658.97EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2409contigH-paniculata_contig2409:18930..21174 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2409.6522.1mRNA_H-paniculata_contig2409.6522.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2409 18930..21204 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2409.6522.1 ID=prot_H-paniculata_contig2409.6522.1|Name=mRNA_H-paniculata_contig2409.6522.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp
MVDVMGRRCAYEGCGKHPRYGVPGSKKRKFCAQHAEAGMIDVGMTTTCII
PNCKKQPSYGKEGSKRAEFCSKHAPSNTVNVRSNKCAHAGCKKQPSYGME
GQKKPVLCSEHAVEGMCNLKWKR*
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