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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 707 |
| Cds size | 615 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1100.652.1 >prot_H-paniculata_contig1100.652.1 ID=prot_H-paniculata_contig1100.652.1|Name=mRNA_H-paniculata_contig1100.652.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=205bp
MATSLLHRDSWVTDDAAATRSSFFSTLTVPAAKRRNSRRKGLLRGWFVAS
IAGWLVSSSGFPDAEAEAIAATMTPSIRRQHYHYGRRDHDRGEENERELQ
VQHRQRPLPLQLELQHHRETTPDPAPPPVPSLTPLGQRQQQQQPCPRRGD
GGSRTSRNFPGISPYSRSPESDLRREAAKSLEHDHRQQRERERGITYEEG
GSPME back to topmRNA from alignment at H-paniculata_contig1100:10015..18784- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1100.652.1 ID=mRNA_H-paniculata_contig1100.652.1|Name=mRNA_H-paniculata_contig1100.652.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8770bp|location=Sequence derived from alignment at H-paniculata_contig1100:10015..18784- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTCGCTGTCAAGGAAATCAAGAAGAGAGGAGGGGCCAAAGGAGAAGGGAA
TAGCACGCAGCCTCCTCGAGGGGTACACGAGTCTCTAGGGTGAGTGGAAA
ATTTTCCCTTGAGTTCATATTATCACTGCAGTCAGAGTTGATTCTACCTT
ATGTATTTTTTTGGATTATCATGGAGATCAACCAACGCCTGTATATGGAA
ATCAAAGGGGTCGTTTTCTTCTCGTCCTCTCATGCGTAGGCAGGTGTAGG
GTGATTAGACAGGACGGCGGGCCCATTTGGTGGTTGGTATGTACAATTTA
TGTTATATATTAGGCACGCCGCGAACCATTCACAAGTCCAGCTCTACAGG
GGTTCGTGCGACGCTCTTGACAGGAAGGTACCCAGTGTACGATGTTGTGC
TGCAGTGCCTGTGTGCCTGATGTGAAGGTTGTGTGATGATCGATATAGCG
GCGGTTGAGTAGTAGAAGCAGCCTACCAGCTGGAAAAATCGAATTCCCTC
CCTCTGTTCGCAGGCTGTGCCCTCGGTCTACTCGTATCAGGTCGCGTGCA
TTTTTCATGTTTTTCCTCTTTTTTCCAAAAACTGATCTTATATTTTGCTC
TGACTGTGTATGCTGCTGCTACACTGCACCCTAGATTGCGGCGTCAACGG
GGCAGTCCTCCTGCCAAGGCACAACGTGCCTCAGCACGGTCTTGTACGCA
CCCTTGCTTCATCTGGACAAGGATAACTGAGTTTCATTAGATATCGAATT
CGGTACCTAGAGGGATGATCGTATTGTTCAACCCATGCTTATATCATGGA
CTCACGAAATGGTGCATATACAGTTGTGAGAGAAAACCACCTCACTGGTA
CTTCAATTTTTGCTCAGGCATTCTGTCTGTGGGTCCAAATATATGCGTCA
AACATGAAGTAGCAGGGAGGTATATGCTGCCTGTCGACCACCATACAGAA
TGCCCCTGTTTTCCGCCATAGCTTGTATGTAGACGTGTGCTCTTTTGTTT
TAATCCTTCCCACAAGAGCATGTTCCGTGTTGGCTGTACTATGCTGTTGT
CTGTTTCAGAATCGTTCTACAATAACTGCATGTTGTGGCCAGGCCTTCGA
GCTGTACATATTGCACAAGTACGTTGCGTTCTGTTCGACAGCAAGTTGCA
CCCACAGTACGGTCGCACCACAGGCTAGGAAACGATTTTGGTTGTCTTTG
GGGTAGAATTGCTGCTTTGCTACTGCTGTGGGTACGTACTAGACACTCAT
GTTGTACATGAGACTCTCCAGTGAGCCAACTGCCTGGCTGTAGTATCTTG
GACGGTTGTCAATTTTTTGCTTTCCATTGCCGTGCTGCGATTTCTTGGAA
CTTGGTCCCTGGCTATAAGTTCTAAATGTAGCCCTGTTGCAACCTGTAAT
TCATGAAAAGTTGTCACCTGCAGAAGTTGTGTCATGTATACTTGCGTAAA
CTCGATGTTGTGAAGAAATGTTGAAGAGTTTGTTTCACTCGTGTTACATG
GCTAGATTGAACCCTTAAATCCTTGTGGCAAGACTGCGTGGTAAGGACCT
TGCTGTCCGTCGACAGCTTGTGCAGTTTGAACTCTTAATGGCCATGATTT
TTACAACACGACGCGCAACTCGTGTTTAGACTATTCCGTTGGAGCCATTG
GTTGGTGTTCGTATTATTCAGCAGCTTTACCGTGCTACACCAGTCTCATG
ATAGGTGATAACTGCACTGTGTCCACGCTGTGCTCTCGGGACTGACTCTG
CAGCTACTGACCGTTGGGCTGAACATGCTACACTCCTACTTGTACGATAG
CACGGCACTCAGCCACCGACCTCTGTACCCCGCTGTTGCACTCAACGTGG
GCCAACTGTTGAAGTTCACTGTATATGGGTGATACTTGCACGCAACAATG
GTCAGATGGAGAATATCATTGTTTGGGCAGGGGCAGGGCAGGGGTGTACG
GGAGTTTTTGTTGTTTTTGTAAATTGTAAATTCAAATCTTAGAAAGAAAA
TATGAAGAAACTATTTTAACTGCCTAAACTATCAGGCGAAATCTATCAGT
GGATGACCCTAACTGGCTCCCACCGTCCAGCCAGCCAGCCAGTATGCCAG
TCACCCCGAACCCTCAACCGAATGCAACCCTACCCCAACTGTTTTCTGGG
GGTGAGGACGGGCCCTGCCTGTATCGATCAGAAGTGAACTACAAATAGCT
CCAACAGCCGAGGCGCTAGGAGAGATGATTAAGATATTTCCGAAATAATT
TACCCGATAATACCGGTATATTTCCACACGTCAGACGACAATGGCTTAAC
AGTCGAGGCATTCGTAGTCGTTGTATGTGTTTTTTTTTATTAGTCGACTT
AATTTCAATGGCCTCGGACCCGACTGGTGGTCGACCTTATTTTCGGAATT
CCGTCGCACCAGTCGACTTGGTGTTGGTACAATATGGGCTATCAGTCTGG
TGGTTATTATCGGGAAATCAGTCGTCGAAGGGCTTCTCCCAGTGGTCGGA
TTGTCGTAATGATTGCGTTAACCCGAGCCCAATCACGCCACACATTATGA
ATCAATCAGTCGAAACACAGCACTTTAAGGTGCTGTGCTTGATGGCTCTC
AACATGAACGACCCTGCTACAGCAGCGGGTGAAGCAAGTGGTGGTGGAGA
TGAAGTAGAGCCTAAAGGGCAGACCCCTATAGGTGGTCTACAACAGCAAG
ACTCAAGACGTCAGTAGTTCCGACCAAAGTCACCACTGATTGCCTTCCTA
AAGGGCAACACCATGTGGGTGGCTTCCTCACTGCCTCCACCAGTACCGAG
TTTTGTTATAGCTGCCCTACGTCATTTTCGAGTCTTCACAGTAGGAAGGT
ACCTCGTCAAAGTACCCCAAATACCCCTAGCTAAGTAACCTCTGTGATCC
CCCGTCTTGCCGAAACAGTAGATGTAATCCTCAACAGCAAACAGCCGGTA
TTGCACAACGGAGCATCTGTTTATCCTCTCGAATCGTTTTTCATGTTCAC
CAATTCAAAATCTAGTTGTTGTTGTTGTTGGCTCGAGTGCCTCGCTCGAT
AATATCACGATACTGTGATCTCTCAAGGCACACAGGCGAAAATTGAAGAA
TCAAGGTTTAGGTCCGTCACTAGGTCGCAGCACAGTATCTGTGTATACTG
GATATTGCTGATACTTTTCTCAGTATATAGTATTGAAACCTATTTGGAAC
CAGTTCTGCTTGGAACCAGTTCTGGCCACTTAAAAAGTGCCGAGACTCGT
CACATGATCACGCAGTCATTATACACACGTCTTTTCCACATGTCCACGGT
TTGCGGATAACCATGTAAACAAGAAAAAAAATGCTTGGTTTCGCCGATGT
TCGTGGAAGTAATTTTTCCGCTTCGCGGTTGGTAATCTGGAGTTATTCCA
GTGGTGTGAGAAGTCTCGGGCCCCGTAATTTTTTTTTTTACTCAGTATGT
TTATAGTAGACACTGGACACGATATATAAGAGATATACCAGAAATATAGT
GGCCCAGAGCGAGCTATAGACGAATCAGTGTTTTCAGGCAGCCCACAGAC
AGCTAGAGGCATGATGACACTAAATGAGAGCAATAAACCTTCAAGTTAAG
TGCTACAGGCAGCAAAGCAACACGTTCACGGACAGACCAACTATACGAAC
AACCTAGAAAAGATAGACAGACAGACCTTGCAGCAGCAGCAGCAGCAGCT
ACATTGTTCACCCGTTCGCACGTGGCATGTCTCGAAGCCGCACCCTACAG
GGCCGTTCAACTGCGATAGCATAAACGTGTCGGGTGACGGCAGTGATTTC
AAGAGGGCACACTCTAACTTTGGTGACGTCGGTGACTTTGGTGCAGAGCC
AGTATCGTTGCCGAGCTTCATTCTGCCTTTTATTTGTTTGTCACAACGCG
GGGGCAAAGACATTTAAGGTGTAGGACCTTTTAGTAGGGTCATTTCTAGC
GACTAATCCCTTCTTTTTTTTTCAGTGGAAATGATGGAATTTGGAGTACG
ACGTGAAAAAAAGCCCAGATTCCCATGAGCTTCTTTCTGTTGATAAGACC
CATATTTTTTTAATTTGGCTCCCTAGGTGAATCGGAAAAATGTGGGAAAA
TTGGATGTGAAATGAGAGCCAAAATTCCACAAGGGATCATTTCTTTTGTT
GAACCTCAATTTTTTTTTTTGCATCGGCCCCTGCTAATTGTGGGAATTTC
GTCTCTTTTTTCGTGCTCTAGACCAAACATCCCGCATGTCCAGATTTCAT
GATTTCTCGGTAAAAATAGTCTTGGACTTCTTGTTATCGAATATATATAT
ATATATATATATTTATTTATTTTCTACGGTGGGCTTCGGCGACGCTGAAC
TCGCCCAGTTTGGGTTCAAAACGATTGCAGTTGATGTGAAATTGGTGGCG
AGCTTGTGTAGAGAACACGTTGTCCGTCCATTTGCTGCAGAGCCCACCCT
GCGAGGTTACCATACTCGCCACTTGGCCTGAATGGTTTCACCCGTTCCCC
CGACAAGATGGACAAATATATATATATATCGGGAAAGGGAGACTAGTCGT
GGCAAGGCGGCTGTGTCCGTACAGTTCGTAATTGACCTCGATTTAGTATG
AAGCTACATTTTTTGAGCTACAATTCTCTCGATATGCCAAATTTATAACA
AATTTCAATGCTCTTCAGGCTTGATTTCATTTTGATGTGTTCATGTAAGC
AGGTCGATACTGCAAAATTATTCCGATAATGTCTGTCGATTGAGCCCTCA
CCCCCTTCGAATTCATGGTGGGAGATTGCCCCCTCTACTTGAAATATGAA
AAAAGAAAAATTCAAAGCGAGTGTAATGGGAAAAAGTGGAAGGATACAGT
GGGGAGGTCGTTGAATCTCGAGATTGCGAAAAAAAAAAAAAGGCGATAGG
GGTTGACCTGAAAAGACGACGGTTGGGGTAGATAGAGTAAAAAAAAAACA
CTCATGAGCCACATTTGGCAACGTAAGAAAGAGCAGTTAGCCATCGAAAA
TTGCTGTGACAGGAACGAAATGCCGTCCTCTCGAGGACGTGTGGTGAATG
GTCTAATAGCTCCGGTGTGCAATACATGACTAAGCTTCCTAAGCTCCCCT
TATTGGTCATGATCCAATTTTGCTGATAAGGGCACAAAACGGAAGTCTAA
AGCCAGCTGCATATCCTCAAACACGGGTACAACAATGGGGGTATAATACG
AGGTTCACAATAACAAATTGACTTCCCTCCCCCCACACCCATACCATCCA
TATCGTTTGTTTGAGCGCTCAATCCGTCACGCGTCCTCATTCCAGAAACG
GTGGCTACAATAATCAGGGCCGTTCATTTCAATCGCTTCTCCGCTTCAAC
GTTGCACCATGGTCGGAGTTGCGTTAGCGGCGTTGCCTACATCAGGAGTG
GACTCATCATATGCCAGTAATAAATACTAAAATTAGTTAATTAATTAATC
AATCCAATGTGTGTTTCAAAAAACAAATACTCGACCTTCAGGAAAATACT
TGATAATTCATATCTTCATGTTGGCTTCCGTGGCGATCATCTCGATATTT
ATCGAAAAAAAAATTACGATATTTTGTGAACGGATTCCTGATTACTTTAT
ATATATATATTTGTTCATCCGCTTTTTTTTTCCTCATTTTTGGACATTTT
TGGACATTTTAATATATATTTATACATATTTTTACATCCCTTTTTGTTTT
TTCTTTGTTTTTTTCAGGAATGGCAACGTCGCTGTTGCATCGCGACAGTT
GGGTGACCGACGATGCAGCAGCCACCAGGAGCTCTTTTTTTTCCACCTTA
ACGGTCCCTGCGGCGAAGAGAAGAAATAGTCGACGTAAAGGGTTGTTACG
GGGATGGTTCGTGGCTTCCATTGCAGGTTGGCTGGTTTCTTCCTCCGGCT
TCCCGGATGCAGGTGCGGCATTAGCGGCTCGGTGATGGCTAAGAGGCCCT
TGTTGTTGTTTTGGGTTTATGCATAAACCTTCATGAAGAGTCGAAGTATG
GCAGCCAGCCGACTTTACAGTTAGGTTATATTCACGTTTTAGGGAAAAAA
ATAACTCAGAAAGGGGGAGGAAGAGGGGGGTGAAGTTGAAATTTAAAAAA
AAAAATGTTTTTACCCTCGAAATTTTAATTCGTAAATGAACCCTTCCCGC
CGTTGGATGAACTATAGCTCTGACGCATCGATAATAACACCGTTGTACCC
ATGCTCAAGTTATGCAGCTGACTTGAAACTTCGGTTGTGTACACTTATCA
GCAAAATTAGATGATGACTAATAATTAGGGGGGATGTTCCGGGCCACTTG
TTTATTTGACGAAAAATTGCTTCTGTAATCGAAATCATACTAGTTAAAGT
ATGAGAATGGCGTGCGTTTACGCCACTTTAGACGTGCACGTTGTGCATTA
TTCCGCACGGTCGTTGTACTGCCTCAAGGGGGAGTACGATCCCCGTGAAC
AGAAGAGTGGATGGTTGCACTTGCTGATGGCTGTAGTTTTTTTTTAACCC
CCCTGAAGGCTGAGGCGAAAATCTCTATCCGATGCCCATACCGAATTTTT
TCTACATTTCCTTTTACAGAACAGTTATTTATTCCTCTGCGGGGTAGGCG
CCTACCCCGGCTCGACTGAACCAGGTAGGCAGTGTGGAGGTTGCATCCAC
TAAAAGACCTCTGACTAGACTTCCAGTCATGCTCAGTTCACGAGCTACCC
TGCCCGTTCGGGCGTAGGTCCGTGGGTCTAAAGTACGCGGACTATTTTTT
ACTATGTTAGCGGGTGAGTTGGCCTAGGCATGTTGCTCTCCATATTAAAC
ACGACGTACATGGATGCTGCAGTCGCGCCCACTTCCATGAAGCGTGCTTC
GAGGTGTGGGCAGCGATGGATTGCCATCATAGCCATCGTCATCGAGGGCA
ACAGCGACAGCATGGATCAGCCTTTCACTAACGGCTGACGGTCGTCGCCG
TCGCTGCCCAGCCCCTCACGTCTCATTACCTCGGCATGGTGTATTTAGCT
TGCCTGTGTCGGTGGCAACATGTTATTATACGTAACAGCTGTAACAAATG
TGCATGGTTATTTTTGTGTGTGAGGCTTGTGGGATGTAACGAGTGCGTGC
TGCATGATGTGTGGTGTGCCCGTCGGTTTGACTGCTTCCGGCGGAATTGA
AGGCTACTCTCGCTCGAAAAAAATCTGAGCTGCTTTTGTTCGGGAGAGTC
ACTGCTCCCTTGACATACAATAAGAAAAAAAAATGTAGATTTCTATCCAA
CGACTAACCCGTCGTCGAATTAGACGGTGTTGGTACCCCCTTGACAGCAA
AATCTTGACCCCGGACAGCCGTCAGTTAAGCTGGAGAAGGGTTCGATTGG
CTGTAACGTGAAGACCATCATGCATGTATACGGTCTAAAAGTGTACAATA
TAGCCAGGACCGAAGGCACGGGGAGCTTCGTTATGTTCATTAGGGTTCAG
GGCTCATAATTGGGGGTTTCAGTCGACTGTCTAATTGGATGTGTGAATAA
AATACCCTCAATATCGGCCGCGCGTTCGACAAGTTTTTTGTATGCTACAT
GAAACGTGAAGAACGCCACAAGATTAATTTCTGGCTGGTGCAGCGATGCA
GGCTAATATCGCAGTGTCGTATTTCAACTGTACGGTCATTCAAAGCTTGA
GTCGCTTTGCGAGCGTTTTTTCTTGTTGTGTTGTAAGGGAGAGGACTTGC
GGTTTGTTTGGGGGCTTTGTTTGGTCCTTGTTGATTCCTTGTCAAGTGAG
CTCATTTTTCGGCGCAAGTCCCTGATATACATGTATTTTCTTTTTCTTTT
TCTTGAGTTCCAAAATGGCCGACACATTGATATGCTTCAAATTCAATTCA
TGACACAACCCTCTCGCAGGTGCGGCATCATGTTTGCCAAGCGAAAAAAA
AAAAAAAAATGATGGCCGCCAAGACGTACGTGACAGTGAAGAACAAAAAT
ACAAGCTTGTCTAAAAGAGTGTGGACATACTGTATACGTGACCACTCCAG
GTGGCGAAGAAAATGCTTGAAGCCTCAAGCCTCTACAAGCCTACAACACC
GCGAGACTTGTTTACCACATACATACCCCAGTCTTGTATTGGAAATGCTG
TTTATTTCATTCGATTCTGGGAGCCGACGTGCCGGGCAAAACTGCCAGCT
CCCTTCATAACTCTTTGTGCACTGAATAGCCCTTATTGACGTTTGTTTAA
TCGGGCCCTCTTGTAGCATCTGCAATTGCTCAGATCTGCGTTAAGGAGAG
GATTGATGATTTTTTTTTGCTTTCATACACGCAATAAACTGCTGATGGTA
TGCTTCGCTGACCCCGATCCCCTTCATCTTGGTATGTATTCACAGCAGAA
GCTGAAGCCATAGCAGCAACAATGACACCATCGATCCGACGGCAACATTA
CCACTACGGCCGTCGGGATCATGACCGTGGCGAAGAAAACGAACGGGAAC
TTCAAGTTCAACATCGCCAACGGCCATTACCACTTCAGCTTGAACTTCAA
CATCATCGTGAAACAACTCCCGATCCAGCGCCGCCACCAGTACCATCACT
TACACCGTTAGGCCAACGACAACAGCAACAACAACCCTGTCCCCGCCGCG
GGGATGGTGGCTCACGTACGTCCCGGAATTTTCCCGGAATTTCGCCGTAT
TCACGATCACCCGAGTCAGATTTACGCCGCGAAGCGGCGAAGTCGCTGGA
GCATGACCATCGTCAACAACGGGAGAGAGAGAGGGGTATTACGTATGAAG
AGGGTGGTTCACCAATGGAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig1100:10015..18784- >mRNA_H-paniculata_contig1100.652.1 ID=mRNA_H-paniculata_contig1100.652.1|Name=mRNA_H-paniculata_contig1100.652.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1230bp|location=Sequence derived from alignment at H-paniculata_contig1100:10015..18784- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCAACGTCGCTGTTGCATCGCGACAGTTGGGTGACCGACGATGCAGC
AGCCACCAGGAGCTCTTTTTTTTCCACCTTAACGGTCCCTGCGGCGAAGA
GAAGAAATAGTCGACGTAAAGGGTTGTTACGGGGATGGTTCGTGGCTTCC
ATTGCAGGTTGGCTGGTTTCTTCCTCCGGCTTCCCGGATGCAGATGGCAA
CGTCGCTGTTGCATCGCGACAGTTGGGTGACCGACGATGCAGCAGCCACC
AGGAGCTCTTTTTTTTCCACCTTAACGGTCCCTGCGGCGAAGAGAAGAAA
TAGTCGACGTAAAGGGTTGTTACGGGGATGGTTCGTGGCTTCCATTGCAG
GTTGGCTGGTTTCTTCCTCCGGCTTCCCGGATGCAGAAGCTGAAGCCATA
GCAGCAACAATGACACCATCGATCCGACGGCAACATTACCACTACGGCCG
TCGGGATCATGACCGTGGCGAAGAAAACGAACGGGAACTTCAAGTTCAAC
ATCGCCAACGGCCATTACCACTTCAGCTTGAACTTCAACATCATCGTGAA
ACAACTCCCGATCCAGCGCCGCCACCAGTACCATCACTTACACCGTTAGG
CCAACGACAACAGCAACAACAACCCTGTCCCCGCCGCGGGGATGGTGGCT
CACGTACGTCCCGGAATTTTCCCGGAATTTCGCCGTATTCACGATCACCC
GAGTCAGATTTACGCCGCGAAGCGGCGAAGTCGCTGGAGCATGACCATCG
TCAACAACGGGAGAGAGAGAGGGGTATTACGTATGAAGAGGGTGGTTCAC
CAATGGAGAAGCTGAAGCCATAGCAGCAACAATGACACCATCGATCCGAC
GGCAACATTACCACTACGGCCGTCGGGATCATGACCGTGGCGAAGAAAAC
GAACGGGAACTTCAAGTTCAACATCGCCAACGGCCATTACCACTTCAGCT
TGAACTTCAACATCATCGTGAAACAACTCCCGATCCAGCGCCGCCACCAG
TACCATCACTTACACCGTTAGGCCAACGACAACAGCAACAACAACCCTGT
CCCCGCCGCGGGGATGGTGGCTCACGTACGTCCCGGAATTTTCCCGGAAT
TTCGCCGTATTCACGATCACCCGAGTCAGATTTACGCCGCGAAGCGGCGA
AGTCGCTGGAGCATGACCATCGTCAACAACGGGAGAGAGAGAGGGGTATT
ACGTATGAAGAGGGTGGTTCACCAATGGAG back to top
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