prot_H-paniculata_contig24086.6519.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24086.6519.1
Unique Nameprot_H-paniculata_contig24086.6519.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length665
Homology
BLAST of mRNA_H-paniculata_contig24086.6519.1 vs. uniprot
Match: A0A6H5JT64_9PHAE (DUF676 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT64_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 2.980e-23
Identity = 102/234 (43.59%), Postives = 125/234 (53.42%), Query Frame = 0
Query:    3 QLRQRWACQTTLHTCSTLQ-----------TRPHGILPPTGT-------PRVKGSAMRAPRLSRLEPDIGSDSFGIALRMACADASAPYKLPLQDQHMFPEPEALLPVCLVQRFSTPPELKQGRRAAGRPGMIVVDTRVPGEHGPGST----------MDAQSTPITSPVIVPTSGSKSSAIPDASTKRGN-NSPKAAAVG----RATGTAERTPFYS-APPPRG--AESLSPR 200
            QLRQRWACQ TLHT S  Q               G  PP+          +V  S   +PRLSRLEP+I +D FG+A+RMACADASAPYKLPL+DQHMFP+ +  LPVCLVQR+   P+ ++G   +GR    V + R  G  G GS           + A ++P  SPV VP   +   A   AS+  G+ +SP    V     RAT TA  TP    A PPR   A S SPR
Sbjct:  644 QLRQRWACQATLHTSSVTQPLSLDPAAATAAAEPGTRPPSPALDGLGWASKVPTSEPGSPRLSRLEPEIAADHFGVAVRMACADASAPYKLPLRDQHMFPDGDVGLPVCLVQRYEYAPKDEEGG-GSGRGRKAVREIRQ-GSGGGGSLAVAAVDKEKLVVASTSPPVSPVWVP---AFRPAFRKASSLPGDPDSPPPPPVRMLPPRATATAPVTPVAGKARPPRHVRAASSSPR 872          
BLAST of mRNA_H-paniculata_contig24086.6519.1 vs. uniprot
Match: D8LMF3_ECTSI (DUF676 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF3_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 5.160e-23
Identity = 67/131 (51.15%), Postives = 81/131 (61.83%), Query Frame = 0
Query:    3 QLRQRWACQTTLHTCSTLQTRPHGILPPTGT-----------PRVKGSAM---------RAPRLSRLEPDIGSDSFGIALRMACADASAPYKLPLQDQHMFPEPEALLPVCLVQRFSTPPELKQGRRAAGR 113
            QLRQRWACQ TLHT S   T+P  + P   T           P + GS            +PRLSRLEP+I +D FG A+RMACADASAPYKLPL+DQHMFP+ +  LPVCLVQR+   P+ ++G    GR
Sbjct:  744 QLRQRWACQATLHTSSA--TQPLSLDPAAATAAAEPGTRPPSPALDGSGRASKLPTSEPESPRLSRLEPEIAADHFGAAVRMACADASAPYKLPLRDQHMFPDGDVGLPVCLVQRYDYAPKEEEGGGGRGR 872          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24086.6519.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JT64_9PHAE2.980e-2343.59DUF676 domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LMF3_ECTSI5.160e-2351.15DUF676 domain-containing protein n=1 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24086contigH-paniculata_contig24086:690..3266 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24086.6519.1mRNA_H-paniculata_contig24086.6519.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24086 690..3266 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24086.6519.1 ID=prot_H-paniculata_contig24086.6519.1|Name=mRNA_H-paniculata_contig24086.6519.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=665bp
MPQLRQRWACQTTLHTCSTLQTRPHGILPPTGTPRVKGSAMRAPRLSRLE
PDIGSDSFGIALRMACADASAPYKLPLQDQHMFPEPEALLPVCLVQRFST
PPELKQGRRAAGRPGMIVVDTRVPGEHGPGSTMDAQSTPITSPVIVPTSG
SKSSAIPDASTKRGNNSPKAAAVGRATGTAERTPFYSAPPPRGAESLSPR
SRRVPPKEALEVFTATFAPPPVMGLAKSSGDSSPDSSTVSSPTRPTNFSV
TPTRRGRSTVITDRRSGHGPVLEGEPEAIPRRDLSPPMSPLALDANNGGD
NADHLRDSKSNTILPPFRVNGPPATPPSSGRSLAKNSRSLSPFFGNRTMV
FLSPISKRRARAQWMARSIVSGEAGASGGRGGGGGGGGGAGGGKMTVSKK
TGRVLKRSTSAMALSRTHLRTRSDGGIRISGWNAVGQAPRFSVQIQDSPI
VVPEGRRLSPSPAGGSRGTGVGRSSKSPPPPRMLPLASAFARSSGQPVSQ
AAVATTTPLMPPTPTSTSTLIPTPPPPPLLAQDLLSPPPTRQGVSSPRTG
GSTPRRRSLSISPRRPPPKQMTEVGPRTTDGYNGGNGEKLDGSSGLGSGS
GGSVSGTVSGSVTSRESVQPEDARTVSNASAKPKMSRAKSEMSLLDGVEQ
SSDLGTFFRRGEGHG
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