prot_H-paniculata_contig24070.6515.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24070.6515.1
Unique Nameprot_H-paniculata_contig24070.6515.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length205
Homology
BLAST of mRNA_H-paniculata_contig24070.6515.1 vs. uniprot
Match: D8LJA1_ECTSI (Phenylalanine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJA1_ECTSI)

HSP 1 Score: 297 bits (760), Expect = 1.880e-94
Identity = 154/206 (74.76%), Postives = 169/206 (82.04%), Query Frame = 0
Query:    2 EESPAFHAVEPI--SGERQQMIVGPGAAKIRPHVVCAVLRGVSFDPMSYKSFMDLQDKLHQNICRRRTLASIGTHDLSTVKGPFRYDAVPPSDITFVPLTPSNQGAFEAKALLDRYNTDHSAKHLKPYTPIIYDSEACYGSFWLLWCCVYPVVTDAAGEVLSLPPVINGHLSRIRLETTDVLIEVTATDLKKANVVLDTVVAMFSQ 205
            E+SP F  VEP   +G RQ+M VG GAAKIRP+VVCAVLRGV+F+  SYKSFMDLQDKLHQNICRRRTL +IG HDL+TVKGPFRYDAVPPSDI FVPLTPS+QG F AKALLD YNTD S KHLKPYTPIIY+SE            VYPV+ DA G+VLSLPPVINGHLSRIRLETTDV IE TATDL KAN+VLDT+V MFS+
Sbjct:   95 EDSPVFRTVEPAGGAGARQKMTVGSGAAKIRPYVVCAVLRGVTFNSKSYKSFMDLQDKLHQNICRRRTLVAIGAHDLNTVKGPFRYDAVPPSDIDFVPLTPSDQGTFNAKALLDLYNTDPSVKHLKPYTPIIYESE------------VYPVIKDANGDVLSLPPVINGHLSRIRLETTDVFIECTATDLTKANIVLDTMVTMFSE 288          
BLAST of mRNA_H-paniculata_contig24070.6515.1 vs. uniprot
Match: A0A835YVN2_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN2_9STRA)

HSP 1 Score: 257 bits (657), Expect = 3.470e-79
Identity = 134/201 (66.67%), Postives = 154/201 (76.62%), Query Frame = 0
Query:    5 PAFHAVEPISGERQQMIVGPGAAKIRPHVVCAVLRGVSFDPMSYKSFMDLQDKLHQNICRRRTLASIGTHDLSTVKGPFRYDAVPPSDITFVPLTPSNQGAFEAKALLDRYNTDHSAKHLKPYTPIIYDSEACYGSFWLLWCCVYPVVTDAAGEVLSLPPVINGHLSRIRLETTDVLIEVTATDLKKANVVLDTVVAMFSQ 205
            P F  VEP SG+RQ + V P  A+IRP+VVCAVLRGV+FD  +YKSF+DLQDKLHQNICRRRTL +IGTHDL T++GPF Y+A+PP DI FVPL P ++GAF+AKALLD YNTD + KHLKPYT IIYDS             VYPVV DA   V SLPPVING+ SRI+  T +V IE TATDL KAN+VLDTVVAMFSQ
Sbjct:   85 PDFRLVEPASGQRQTITVKPSTAQIRPYVVCAVLRGVTFDARTYKSFIDLQDKLHQNICRRRTLVAIGTHDLDTLEGPFTYEALPPQDIEFVPLVPCDRGAFKAKALLDLYNTDVAVKHLKPYTGIIYDSP------------VYPVVLDARRTVCSLPPVINGYHSRIQQTTRNVFIECTATDLTKANIVLDTVVAMFSQ 273          
BLAST of mRNA_H-paniculata_contig24070.6515.1 vs. uniprot
Match: A0A482RVT2_9ARCH (Phenylalanine--tRNA ligase subunit beta (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVT2_9ARCH)

HSP 1 Score: 213 bits (543), Expect = 4.080e-67
Identity = 112/185 (60.54%), Postives = 129/185 (69.73%), Query Frame = 0
Query:   20 MIVGPGAAKIRPHVVCAVLRGVSFDPMSYKSFMDLQDKLHQNICRRRTLASIGTHDLSTVKGPFRYDAVPPSDITFVPLTPSNQGAFEAKALLDRYNTDHSAKHLKPYTPIIYDSEACYGSFWLLWCCVYPVVTDAAGEVLSLPPVINGHLSRIRLETTDVLIEVTATDLKKANVVLDTVVAMFS 204
            M V P   +IRP VVCAVLRGV FD   YKSF+DLQ+KLHQNICR+R+  +IGTHDL T++GPFRY A+ P DI FVPLT  +  +F  K LLD Y  D S KHLKPYT +IY S             VYPV+ D  G VLSLPP+ING  SRI L T ++ IE TATDL KAN+VLDTVVAMFS
Sbjct:   32 MSVDPSVQQIRPFVVCAVLRGVQFDVKRYKSFIDLQEKLHQNICRKRSYVAIGTHDLDTIEGPFRYAALSPEDIEFVPLTADDGRSFTGKELLDFYREDPSVKHLKPYTDLIYSSP------------VYPVIYDNQGRVLSLPPIINGRHSRITLHTRNIFIECTATDLTKANIVLDTVVAMFS 204          
BLAST of mRNA_H-paniculata_contig24070.6515.1 vs. uniprot
Match: A0A7S1U5G5_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5G5_9STRA)

HSP 1 Score: 223 bits (569), Expect = 1.190e-65
Identity = 119/204 (58.33%), Postives = 141/204 (69.12%), Query Frame = 0
Query:    4 SPAFHAVEPISGE--RQQMIVGPGAAKIRPHVVCAVLRGVSFDPMSYKSFMDLQDKLHQNICRRRTLASIGTHDLSTVKGPFRYDAVPPSDITFVPLTPSNQGAFEAKALLDRYNTDHSAKHLKPYTPIIYDSEACYGSFWLLWCCVYPVVTDAAGEVLSLPPVINGHLSRIRLETTDVLIEVTATDLKKANVVLDTVVAMFSQ 205
            +P +  +EP +G   R  M V    A +RPHVVCAVLRGV+F P  Y+SF++LQDKLHQNICRRRTL +IGTHDL+T+  PFRY A+PP+DI FVPLT   + +F+ KALLD Y TD   KHL PY  IIYD               YPV+ DA   VLSLPP+ING  SRIRL+T DV IE TATD  KAN+VLDTVV MFS+
Sbjct:  126 APTYEVLEPAAGAGARLAMTVEAPTAGVRPHVVCAVLRGVTFTPKRYQSFIELQDKLHQNICRRRTLVAIGTHDLATLTPPFRYRALPPTDINFVPLT-EEERSFDGKALLDHYKTDGQCKHLAPYVDIIYDEPN------------YPVIYDAEDRVLSLPPIINGRHSRIRLDTRDVFIECTATDYTKANIVLDTVVTMFSE 316          
BLAST of mRNA_H-paniculata_contig24070.6515.1 vs. uniprot
Match: W7TXC3_9STRA (Phenylalanine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXC3_9STRA)

HSP 1 Score: 217 bits (552), Expect = 9.150e-64
Identity = 115/207 (55.56%), Postives = 141/207 (68.12%), Query Frame = 0
Query:    1 MEESPAFHAVEPIS--GERQQMIVGPGAAKIRPHVVCAVLRGVSFDPMSYKSFMDLQDKLHQNICRRRTLASIGTHDLSTVKGPFRYDAVPPSDITFVPLTPSNQGAFEAKALLDRYNTDHSAKHLKPYTPIIYDSEACYGSFWLLWCCVYPVVTDAAGEVLSLPPVINGHLSRIRLETTDVLIEVTATDLKKANVVLDTVVAMFSQ 205
            ++++P++  VEP    G R  M V    A +RP V CA+LR ++FDP+ YKSF+DLQ+ LH+NICRRRTL +IGTHDL T++GPFRY A  P+ I F PLT  +   F AK LLD Y TD SAKHL PYT IIY++              YPV+ D+ G VLSLPPVING  SRI L+T +V IE TATD  KAN+VLDTVV MFSQ
Sbjct:   91 LDKAPSYRKVEPTDNGGTRTVMSVEASTASVRPFVACAILRDMTFDPLVYKSFIDLQEHLHRNICRRRTLVAIGTHDLDTLRGPFRYTAADPASIQFSPLTSDDGRVFNAKELLDFYRTDESAKHLSPYTDIIYEAPR------------YPVLYDSRGTVLSLPPVINGRHSRITLQTRNVFIECTATDKTKANIVLDTVVTMFSQ 285          
BLAST of mRNA_H-paniculata_contig24070.6515.1 vs. uniprot
Match: A0A7S3PY32_9STRA (Phenylalanine--tRNA ligase (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PY32_9STRA)

HSP 1 Score: 216 bits (550), Expect = 2.510e-63
Identity = 114/204 (55.88%), Postives = 143/204 (70.10%), Query Frame = 0
Query:    3 ESPAFHAVEPISGERQQMIVGPGAAKIRPHVVCAVLRGVSFDPMSYKSFMDLQDKLHQNICRRRTLASIGTHDLSTVKGPFRYDAVPPSDITFVPLTPSNQG-AFEAKALLDRYNTDHSAKHLKPYTPIIYDSEACYGSFWLLWCCVYPVVTDAAGEVLSLPPVINGHLSRIRLETTDVLIEVTATDLKKANVVLDTVVAMFSQ 205
            ++P +  ++    + + M V P  A+IRP VVCA+LR V+F    YKSF++LQD+LH+N+CR+RTL +IGTHDL TVKGPF YDA P +DI FVPLT S+ G +F AKALL+ Y T+ + KHLKPY PII DS             VYPVV D +  VLSLPP+ING  S+I L T +V IE TATDL KAN+VLDTVV MFS+
Sbjct:  108 DAPTYEVIDVPEADMEVMTVKPATAQIRPFVVCAILRDVTFTEQRYKSFIELQDQLHRNLCRQRTLVAIGTHDLDTVKGPFAYDARPGTDIEFVPLTHSSSGESFNAKALLEHYETEVACKHLKPYVPIIKDSP------------VYPVVLDGSETVLSLPPIINGDKSKITLGTKNVFIECTATDLTKANIVLDTVVTMFSE 299          
BLAST of mRNA_H-paniculata_contig24070.6515.1 vs. uniprot
Match: A0A8K1FBR6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBR6_PYTOL)

HSP 1 Score: 211 bits (537), Expect = 1.220e-61
Identity = 113/204 (55.39%), Postives = 139/204 (68.14%), Query Frame = 0
Query:    2 EESPAFHAVEPISGERQQMIVGPGAAKIRPHVVCAVLRGVSFDPMSYKSFMDLQDKLHQNICRRRTLASIGTHDLSTVKGPFRYDAVPPSDITFVPLTPSNQGAFEAKALLDRYNTDHSAKHLKPYTPIIYDSEACYGSFWLLWCCVYPVVTDAAGEVLSLPPVINGHLSRIRLETTDVLIEVTATDLKKANVVLDTVVAMFSQ 205
            E+ P +  V P +G  QQ+ V P    IRP VV A+LR V F    Y SF+DLQDKLHQNICRRRTL +IGTHDL T++GPF Y+A+ P  I FVPL+ + +  F+AK LLD Y T+   KHLKPYT IIYDS             VYPV+TD  G VLSLPP+ING  S+I + T +V IE TATD+ KA+VVL+TV+AMFS+
Sbjct:   92 EKPPQYKLVPPATGAPQQVTVKPSTKSIRPFVVSAILRNVKFTQERYDSFIDLQDKLHQNICRRRTLVAIGTHDLDTIEGPFTYNALSPDQIKFVPLSQTRE--FQAKELLDFYRTNVEVKHLKPYTDIIYDSP------------VYPVITDKNGVVLSLPPIINGEHSKITINTKNVFIECTATDITKAHVVLNTVIAMFSE 281          
BLAST of mRNA_H-paniculata_contig24070.6515.1 vs. uniprot
Match: A0A7S2BP41_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BP41_9STRA)

HSP 1 Score: 202 bits (515), Expect = 1.490e-61
Identity = 112/202 (55.45%), Postives = 137/202 (67.82%), Query Frame = 0
Query:    1 MEESPAFHAVEPISGERQQMIVGPGAAKI--RPHVVCAVLRGVSFDPMSYKSFMDLQDKLHQNICRRRTLASIGTHDLSTVKGPFRYDAVPPSDITFVPLTPSNQGAFEAKALLDRYNTDHSAKHLKPYTPIIYDSEACYGSFWLLWCCVYPVVTDAAGEVLSLPPVINGHLSRIRLETTDVLIEVTATDLKKANVVLDTVV 200
            ++ +P +  +EP   + Q M V     K   RP VV AVLRG++FD  +YKSF+DLQDKLHQNICR R L +IGTHDL T++GPF YDA    DI+ VPLT ++     AK LLD YNTD   KHLKPYT +IYDSE             YP++TDA G VLS+PP+INGH SRI+L T +VLIE TATD  KA++VLDTVV
Sbjct:  112 LDPAPTYRMLEP--EQPQVMRVKSANCKTVPRPFVVSAVLRGMTFDEKAYKSFIDLQDKLHQNICRERKLVAIGTHDLDTIEGPFTYDAPLREDISLVPLTTTDGQPVGAKDLLDHYNTDEGCKHLKPYTKLIYDSER------------YPLITDAKGTVLSMPPIINGHHSRIQLHTKNVLIEATATDHTKAHIVLDTVV 299          
BLAST of mRNA_H-paniculata_contig24070.6515.1 vs. uniprot
Match: A0A485LED1_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LED1_9STRA)

HSP 1 Score: 209 bits (533), Expect = 4.160e-61
Identity = 115/204 (56.37%), Postives = 137/204 (67.16%), Query Frame = 0
Query:    2 EESPAFHAVEPISGERQQMIVGPGAAKIRPHVVCAVLRGVSFDPMSYKSFMDLQDKLHQNICRRRTLASIGTHDLSTVKGPFRYDAVPPSDITFVPLTPSNQGAFEAKALLDRYNTDHSAKHLKPYTPIIYDSEACYGSFWLLWCCVYPVVTDAAGEVLSLPPVINGHLSRIRLETTDVLIEVTATDLKKANVVLDTVVAMFSQ 205
            E+ P F AV   S  R  + V PG  K+RP VV  VLRGV+F P  Y SF+DLQDKLHQNICRRRTL +IGTHDL T++GPF Y+A  PSDI FVPL+ + +  F AK LLD Y T    KHLKPYT IIYD               YP++ DA   VLSLPP+IN   S+I+L T +V +E TATD+ KANVVL+TV+AMFSQ
Sbjct:   91 EQPPVFRAVPAASPHR--ITVKPGLEKMRPFVVSCVLRGVTFTPERYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTIQGPFTYEAQAPSDIKFVPLSQTRE--FNAKELLDHYRTAPECKHLKPYTDIIYDFPT------------YPIIRDANRTVLSLPPIINSEHSKIKLTTRNVFVECTATDITKANVVLNTVIAMFSQ 278          
BLAST of mRNA_H-paniculata_contig24070.6515.1 vs. uniprot
Match: K0SRH2_THAOC (Phenylalanine--tRNA ligase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SRH2_THAOC)

HSP 1 Score: 209 bits (533), Expect = 6.880e-61
Identity = 109/205 (53.17%), Postives = 145/205 (70.73%), Query Frame = 0
Query:    3 ESPAFHAVEPISGERQQM-IVGPGAAKIRPHVVCAVLRGVSFDPMSYKSFMDLQDKLHQNICRRRTLASIGTHDLSTVKGPFRYDAVPPSDITFVPLTPSNQGA-FEAKALLDRYNTDHSAKHLKPYTPIIYDSEACYGSFWLLWCCVYPVVTDAAGEVLSLPPVINGHLSRIRLETTDVLIEVTATDLKKANVVLDTVVAMFSQ 205
            ++P++  +EP       M +V      +RP+VVCAVLR V+FDP  Y+SF++LQD+LH+N+CR+RTL +IGTHDL +V+GPF YDA  P +I FVPLT +++G  F+ + L++ Y T+ + KHLKPY PII DS             +YPVV D+ G VLSLPP+ING  SRI L+T +V IE TATDL KAN+VLDTVVAMFS+
Sbjct:   96 DAPSYEVLEPSHEASSTMTVVQANVDTVRPYVVCAVLRDVTFDPERYQSFIELQDQLHRNLCRQRTLVAIGTHDLDSVRGPFTYDARAPGEIKFVPLTHTDEGREFDGRELMEHYETEPACKHLKPYVPIIKDSP------------LYPVVLDSEGTVLSLPPIINGSKSRITLDTKNVFIECTATDLTKANIVLDTVVAMFSE 288          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24070.6515.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJA1_ECTSI1.880e-9474.76Phenylalanine--tRNA ligase n=2 Tax=Ectocarpus TaxI... [more]
A0A835YVN2_9STRA3.470e-7966.67Phenylalanine--tRNA ligase n=1 Tax=Tribonema minus... [more]
A0A482RVT2_9ARCH4.080e-6760.54Phenylalanine--tRNA ligase subunit beta (Fragment)... [more]
A0A7S1U5G5_9STRA1.190e-6558.33Phenylalanine--tRNA ligase n=1 Tax=Phaeomonas parv... [more]
W7TXC3_9STRA9.150e-6455.56Phenylalanine--tRNA ligase n=2 Tax=Monodopsidaceae... [more]
A0A7S3PY32_9STRA2.510e-6355.88Phenylalanine--tRNA ligase (Fragment) n=1 Tax=Chae... [more]
A0A8K1FBR6_PYTOL1.220e-6155.39Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2BP41_9STRA1.490e-6155.45Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A485LED1_9STRA4.160e-6156.37Phenylalanine--tRNA ligase n=1 Tax=Aphanomyces ste... [more]
K0SRH2_THAOC6.880e-6153.17Phenylalanine--tRNA ligase n=1 Tax=Thalassiosira o... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005146B3/B4 tRNA-binding domainSMARTSM00873B3_4_2coord: 29..205
e-value: 2.7E-11
score: 53.5
IPR005146B3/B4 tRNA-binding domainPFAMPF03483B3_4coord: 30..204
e-value: 6.1E-18
score: 65.1
IPR020825Phenylalanyl-tRNA synthetase, B3/B4GENE3D3.50.40.10coord: 11..205
e-value: 1.3E-66
score: 226.2
NoneNo IPR availablePANTHERPTHR10947PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47coord: 5..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24070contigH-paniculata_contig24070:317..2874 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24070.6515.1mRNA_H-paniculata_contig24070.6515.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24070 308..2874 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24070.6515.1 ID=prot_H-paniculata_contig24070.6515.1|Name=mRNA_H-paniculata_contig24070.6515.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=205bp
MEESPAFHAVEPISGERQQMIVGPGAAKIRPHVVCAVLRGVSFDPMSYKS
FMDLQDKLHQNICRRRTLASIGTHDLSTVKGPFRYDAVPPSDITFVPLTP
SNQGAFEAKALLDRYNTDHSAKHLKPYTPIIYDSEACYGSFWLLWCCVYP
VVTDAAGEVLSLPPVINGHLSRIRLETTDVLIEVTATDLKKANVVLDTVV
AMFSQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005146B3/B4_tRNA-bd
IPR020825Phe-tRNA_synthase_B3/B4