mRNA_H-paniculata_contig24070.6515.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig24070.6515.1 vs. uniprot
Match: D8LJA1_ECTSI (Phenylalanine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJA1_ECTSI) HSP 1 Score: 304 bits (778), Expect = 4.340e-97 Identity = 157/210 (74.76%), Postives = 172/210 (81.90%), Query Frame = 1
Query: 1 FLGMEESPAFHAVEPI--SGERQQMIVGPGAAKIRPHVVCAVLRGVSFDPMSYKSFMDLQDKLHQNICRRRTLASIGTHDLSTVKGPFRYDAVPPSDITFVPLTPSNQGAFEAKALLDRYNTDHSAKHLKPYTPIIYDSEACYGSFWLLWCCVYPVVTDAAGEVLSLPPVINGHLSRIRLETTDVLIEVTATDLKKANVVLDTVVAMFSQ 624
FLG E+SP F VEP +G RQ+M VG GAAKIRP+VVCAVLRGV+F+ SYKSFMDLQDKLHQNICRRRTL +IG HDL+TVKGPFRYDAVPPSDI FVPLTPS+QG F AKALLD YNTD S KHLKPYTPIIY+SE VYPV+ DA G+VLSLPPVINGHLSRIRLETTDV IE TATDL KAN+VLDT+V MFS+
Sbjct: 91 FLGKEDSPVFRTVEPAGGAGARQKMTVGSGAAKIRPYVVCAVLRGVTFNSKSYKSFMDLQDKLHQNICRRRTLVAIGAHDLNTVKGPFRYDAVPPSDIDFVPLTPSDQGTFNAKALLDLYNTDPSVKHLKPYTPIIYESE------------VYPVIKDANGDVLSLPPVINGHLSRIRLETTDVFIECTATDLTKANIVLDTMVTMFSE 288
BLAST of mRNA_H-paniculata_contig24070.6515.1 vs. uniprot
Match: A0A835YVN2_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN2_9STRA) HSP 1 Score: 263 bits (671), Expect = 3.270e-81 Identity = 137/208 (65.87%), Postives = 157/208 (75.48%), Query Frame = 1
Query: 1 FLGMEESPAFHAVEPISGERQQMIVGPGAAKIRPHVVCAVLRGVSFDPMSYKSFMDLQDKLHQNICRRRTLASIGTHDLSTVKGPFRYDAVPPSDITFVPLTPSNQGAFEAKALLDRYNTDHSAKHLKPYTPIIYDSEACYGSFWLLWCCVYPVVTDAAGEVLSLPPVINGHLSRIRLETTDVLIEVTATDLKKANVVLDTVVAMFSQ 624
FLG P F VEP SG+RQ + V P A+IRP+VVCAVLRGV+FD +YKSF+DLQDKLHQNICRRRTL +IGTHDL T++GPF Y+A+PP DI FVPL P ++GAF+AKALLD YNTD + KHLKPYT IIYDS VYPVV DA V SLPPVING+ SRI+ T +V IE TATDL KAN+VLDTVVAMFSQ
Sbjct: 78 FLGRASPPDFRLVEPASGQRQTITVKPSTAQIRPYVVCAVLRGVTFDARTYKSFIDLQDKLHQNICRRRTLVAIGTHDLDTLEGPFTYEALPPQDIEFVPLVPCDRGAFKAKALLDLYNTDVAVKHLKPYTGIIYDSP------------VYPVVLDARRTVCSLPPVINGYHSRIQQTTRNVFIECTATDLTKANIVLDTVVAMFSQ 273
BLAST of mRNA_H-paniculata_contig24070.6515.1 vs. uniprot
Match: A0A482RVT2_9ARCH (Phenylalanine--tRNA ligase subunit beta (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVT2_9ARCH) HSP 1 Score: 216 bits (550), Expect = 3.960e-68 Identity = 116/207 (56.04%), Postives = 139/207 (67.15%), Query Frame = 1
Query: 1 FLGMEESPAFHAVEPISGERQQMIVGPGAAKIRPHVVCAVLRGVSFDPMSYKSFMDLQDKLHQNICRRRTLASIGTHDLSTVKGPFRYDAVPPSDITFVPLTPSNQGAFEAKALLDRYNTDHSAKHLKPYTPIIYDSEACYGSFWLLWCCVYPVVTDAAGEVLSLPPVINGHLSRIRLETTDVLIEVTATDLKKANVVLDTVVAMFS 621
F G++ +P + ++ S M V P +IRP VVCAVLRGV FD YKSF+DLQ+KLHQNICR+R+ +IGTHDL T++GPFRY A+ P DI FVPLT + +F K LLD Y D S KHLKPYT +IY S VYPV+ D G VLSLPP+ING SRI L T ++ IE TATDL KAN+VLDTVVAMFS
Sbjct: 11 FQGLQAAPVYKVLKS-SETPLVMSVDPSVQQIRPFVVCAVLRGVQFDVKRYKSFIDLQEKLHQNICRKRSYVAIGTHDLDTIEGPFRYAALSPEDIEFVPLTADDGRSFTGKELLDFYREDPSVKHLKPYTDLIYSSP------------VYPVIYDNQGRVLSLPPIINGRHSRITLHTRNIFIECTATDLTKANIVLDTVVAMFS 204
BLAST of mRNA_H-paniculata_contig24070.6515.1 vs. uniprot
Match: A0A7S1U5G5_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5G5_9STRA) HSP 1 Score: 230 bits (586), Expect = 4.480e-68 Identity = 122/210 (58.10%), Postives = 145/210 (69.05%), Query Frame = 1
Query: 1 FLGMEESPAFHAVEPISGE--RQQMIVGPGAAKIRPHVVCAVLRGVSFDPMSYKSFMDLQDKLHQNICRRRTLASIGTHDLSTVKGPFRYDAVPPSDITFVPLTPSNQGAFEAKALLDRYNTDHSAKHLKPYTPIIYDSEACYGSFWLLWCCVYPVVTDAAGEVLSLPPVINGHLSRIRLETTDVLIEVTATDLKKANVVLDTVVAMFSQ 624
FLG + +P + +EP +G R M V A +RPHVVCAVLRGV+F P Y+SF++LQDKLHQNICRRRTL +IGTHDL+T+ PFRY A+PP+DI FVPLT + +F+ KALLD Y TD KHL PY IIYD YPV+ DA VLSLPP+ING SRIRL+T DV IE TATD KAN+VLDTVV MFS+
Sbjct: 120 FLGTQPAPTYEVLEPAAGAGARLAMTVEAPTAGVRPHVVCAVLRGVTFTPKRYQSFIELQDKLHQNICRRRTLVAIGTHDLATLTPPFRYRALPPTDINFVPLT-EEERSFDGKALLDHYKTDGQCKHLAPYVDIIYDEPN------------YPVIYDAEDRVLSLPPIINGRHSRIRLDTRDVFIECTATDYTKANIVLDTVVTMFSE 316
BLAST of mRNA_H-paniculata_contig24070.6515.1 vs. uniprot
Match: W7TXC3_9STRA (Phenylalanine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXC3_9STRA) HSP 1 Score: 221 bits (563), Expect = 2.490e-65 Identity = 117/210 (55.71%), Postives = 143/210 (68.10%), Query Frame = 1
Query: 1 FLGMEESPAFHAVEPIS--GERQQMIVGPGAAKIRPHVVCAVLRGVSFDPMSYKSFMDLQDKLHQNICRRRTLASIGTHDLSTVKGPFRYDAVPPSDITFVPLTPSNQGAFEAKALLDRYNTDHSAKHLKPYTPIIYDSEACYGSFWLLWCCVYPVVTDAAGEVLSLPPVINGHLSRIRLETTDVLIEVTATDLKKANVVLDTVVAMFSQ 624
FL ++++P++ VEP G R M V A +RP V CA+LR ++FDP+ YKSF+DLQ+ LH+NICRRRTL +IGTHDL T++GPFRY A P+ I F PLT + F AK LLD Y TD SAKHL PYT IIY++ YPV+ D+ G VLSLPPVING SRI L+T +V IE TATD KAN+VLDTVV MFSQ
Sbjct: 88 FLELDKAPSYRKVEPTDNGGTRTVMSVEASTASVRPFVACAILRDMTFDPLVYKSFIDLQEHLHRNICRRRTLVAIGTHDLDTLRGPFRYTAADPASIQFSPLTSDDGRVFNAKELLDFYRTDESAKHLSPYTDIIYEAPR------------YPVLYDSRGTVLSLPPVINGRHSRITLQTRNVFIECTATDKTKANIVLDTVVTMFSQ 285
BLAST of mRNA_H-paniculata_contig24070.6515.1 vs. uniprot
Match: A0A7S3PY32_9STRA (Phenylalanine--tRNA ligase (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PY32_9STRA) HSP 1 Score: 221 bits (563), Expect = 3.530e-65 Identity = 117/209 (55.98%), Postives = 146/209 (69.86%), Query Frame = 1
Query: 1 FLGMEESPAFHAVEPISGERQQMIVGPGAAKIRPHVVCAVLRGVSFDPMSYKSFMDLQDKLHQNICRRRTLASIGTHDLSTVKGPFRYDAVPPSDITFVPLTPSNQG-AFEAKALLDRYNTDHSAKHLKPYTPIIYDSEACYGSFWLLWCCVYPVVTDAAGEVLSLPPVINGHLSRIRLETTDVLIEVTATDLKKANVVLDTVVAMFSQ 624
FLG ++P + ++ + + M V P A+IRP VVCA+LR V+F YKSF++LQD+LH+N+CR+RTL +IGTHDL TVKGPF YDA P +DI FVPLT S+ G +F AKALL+ Y T+ + KHLKPY PII DS VYPVV D + VLSLPP+ING S+I L T +V IE TATDL KAN+VLDTVV MFS+
Sbjct: 103 FLGDMDAPTYEVIDVPEADMEVMTVKPATAQIRPFVVCAILRDVTFTEQRYKSFIELQDQLHRNLCRQRTLVAIGTHDLDTVKGPFAYDARPGTDIEFVPLTHSSSGESFNAKALLEHYETEVACKHLKPYVPIIKDSP------------VYPVVLDGSETVLSLPPIINGDKSKITLGTKNVFIECTATDLTKANIVLDTVVTMFSE 299
BLAST of mRNA_H-paniculata_contig24070.6515.1 vs. uniprot
Match: A0A7S2BP41_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BP41_9STRA) HSP 1 Score: 207 bits (528), Expect = 1.820e-63 Identity = 114/205 (55.61%), Postives = 139/205 (67.80%), Query Frame = 1
Query: 1 FLGMEESPAFHAVEPISGERQQMIVGPGAAKI--RPHVVCAVLRGVSFDPMSYKSFMDLQDKLHQNICRRRTLASIGTHDLSTVKGPFRYDAVPPSDITFVPLTPSNQGAFEAKALLDRYNTDHSAKHLKPYTPIIYDSEACYGSFWLLWCCVYPVVTDAAGEVLSLPPVINGHLSRIRLETTDVLIEVTATDLKKANVVLDTVV 609
F G++ +P + +EP + Q M V K RP VV AVLRG++FD +YKSF+DLQDKLHQNICR R L +IGTHDL T++GPF YDA DI+ VPLT ++ AK LLD YNTD KHLKPYT +IYDSE YP++TDA G VLS+PP+INGH SRI+L T +VLIE TATD KA++VLDTVV
Sbjct: 109 FKGLDPAPTYRMLEP--EQPQVMRVKSANCKTVPRPFVVSAVLRGMTFDEKAYKSFIDLQDKLHQNICRERKLVAIGTHDLDTIEGPFTYDAPLREDISLVPLTTTDGQPVGAKDLLDHYNTDEGCKHLKPYTKLIYDSER------------YPLITDAKGTVLSMPPIINGHHSRIQLHTKNVLIEATATDHTKAHIVLDTVV 299
BLAST of mRNA_H-paniculata_contig24070.6515.1 vs. uniprot
Match: A0A8K1FBR6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBR6_PYTOL) HSP 1 Score: 215 bits (547), Expect = 4.690e-63 Identity = 115/208 (55.29%), Postives = 141/208 (67.79%), Query Frame = 1
Query: 1 FLGMEESPAFHAVEPISGERQQMIVGPGAAKIRPHVVCAVLRGVSFDPMSYKSFMDLQDKLHQNICRRRTLASIGTHDLSTVKGPFRYDAVPPSDITFVPLTPSNQGAFEAKALLDRYNTDHSAKHLKPYTPIIYDSEACYGSFWLLWCCVYPVVTDAAGEVLSLPPVINGHLSRIRLETTDVLIEVTATDLKKANVVLDTVVAMFSQ 624
FL E+ P + V P +G QQ+ V P IRP VV A+LR V F Y SF+DLQDKLHQNICRRRTL +IGTHDL T++GPF Y+A+ P I FVPL+ + + F+AK LLD Y T+ KHLKPYT IIYDS VYPV+TD G VLSLPP+ING S+I + T +V IE TATD+ KA+VVL+TV+AMFS+
Sbjct: 88 FLQKEKPPQYKLVPPATGAPQQVTVKPSTKSIRPFVVSAILRNVKFTQERYDSFIDLQDKLHQNICRRRTLVAIGTHDLDTIEGPFTYNALSPDQIKFVPLSQTRE--FQAKELLDFYRTNVEVKHLKPYTDIIYDSP------------VYPVITDKNGVVLSLPPIINGEHSKITINTKNVFIECTATDITKAHVVLNTVIAMFSE 281
BLAST of mRNA_H-paniculata_contig24070.6515.1 vs. uniprot
Match: K0SRH2_THAOC (Phenylalanine--tRNA ligase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SRH2_THAOC) HSP 1 Score: 214 bits (546), Expect = 9.730e-63 Identity = 112/210 (53.33%), Postives = 148/210 (70.48%), Query Frame = 1
Query: 1 FLGMEESPAFHAVEPISGERQQM-IVGPGAAKIRPHVVCAVLRGVSFDPMSYKSFMDLQDKLHQNICRRRTLASIGTHDLSTVKGPFRYDAVPPSDITFVPLTPSNQGA-FEAKALLDRYNTDHSAKHLKPYTPIIYDSEACYGSFWLLWCCVYPVVTDAAGEVLSLPPVINGHLSRIRLETTDVLIEVTATDLKKANVVLDTVVAMFSQ 624
FLG ++P++ +EP M +V +RP+VVCAVLR V+FDP Y+SF++LQD+LH+N+CR+RTL +IGTHDL +V+GPF YDA P +I FVPLT +++G F+ + L++ Y T+ + KHLKPY PII DS +YPVV D+ G VLSLPP+ING SRI L+T +V IE TATDL KAN+VLDTVVAMFS+
Sbjct: 91 FLGDMDAPSYEVLEPSHEASSTMTVVQANVDTVRPYVVCAVLRDVTFDPERYQSFIELQDQLHRNLCRQRTLVAIGTHDLDSVRGPFTYDARAPGEIKFVPLTHTDEGREFDGRELMEHYETEPACKHLKPYVPIIKDSP------------LYPVVLDSEGTVLSLPPIINGSKSRITLDTKNVFIECTATDLTKANIVLDTVVAMFSE 288
BLAST of mRNA_H-paniculata_contig24070.6515.1 vs. uniprot
Match: A0A7S2BNL5_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BNL5_9STRA) HSP 1 Score: 214 bits (545), Expect = 1.230e-62 Identity = 117/210 (55.71%), Postives = 143/210 (68.10%), Query Frame = 1
Query: 1 FLGMEESPAFHAVEPISGERQQMIVGPGAAKI--RPHVVCAVLRGVSFDPMSYKSFMDLQDKLHQNICRRRTLASIGTHDLSTVKGPFRYDAVPPSDITFVPLTPSNQGAFEAKALLDRYNTDHSAKHLKPYTPIIYDSEACYGSFWLLWCCVYPVVTDAAGEVLSLPPVINGHLSRIRLETTDVLIEVTATDLKKANVVLDTVVAMFSQ 624
F G++ +P + +EP + Q M V K RP VV AVLRG++FD +YKSF+DLQDKLHQNICR R L +IGTHDL T++GPF YDA DI+ VPLT ++ AK LLD YNTD KHLKPYT +IYDSE YP++TDA G VLS+PP+INGH SRI+L T +VLIE TATD KA++VLDTVV MFS+
Sbjct: 109 FKGLDPAPTYRMLEP--EQPQVMRVKSANCKTVPRPFVVSAVLRGMTFDEKAYKSFIDLQDKLHQNICRERKLVAIGTHDLDTIEGPFTYDAPLREDISLVPLTTTDGQPVGAKDLLDHYNTDEGCKHLKPYTKLIYDSER------------YPLITDAKGTVLSMPPIINGHHSRIQLHTKNVLIEATATDHTKAHIVLDTVVTMFSE 304 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24070.6515.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig24070.6515.1 >prot_H-paniculata_contig24070.6515.1 ID=prot_H-paniculata_contig24070.6515.1|Name=mRNA_H-paniculata_contig24070.6515.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=205bp MEESPAFHAVEPISGERQQMIVGPGAAKIRPHVVCAVLRGVSFDPMSYKSback to top mRNA from alignment at H-paniculata_contig24070:308..2874+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig24070.6515.1 ID=mRNA_H-paniculata_contig24070.6515.1|Name=mRNA_H-paniculata_contig24070.6515.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2567bp|location=Sequence derived from alignment at H-paniculata_contig24070:308..2874+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig24070:308..2874+ >mRNA_H-paniculata_contig24070.6515.1 ID=mRNA_H-paniculata_contig24070.6515.1|Name=mRNA_H-paniculata_contig24070.6515.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1230bp|location=Sequence derived from alignment at H-paniculata_contig24070:308..2874+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |