mRNA_H-paniculata_contig2407.6514.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2407.6514.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 176 bits (447), Expect = 1.310e-49 Identity = 94/188 (50.00%), Postives = 113/188 (60.11%), Query Frame = 1
Query: 1 EETVRSTKVQHKSHIAKVMFIWAISHPDPSRDFDGNIRIWRICVIKQAQRNSAR-------------------RERG----QQYEFDVTIDAEWYQGWCKDSFLPALEEMMPWLEGEEVVAQQDGATPHTGKDTPRKLNEIGRDGGWDTNLVIQPAQSPDLNIRDMGFFASLKSRVLRERYGTIDGLV 495
E+ +V H+SH+ K+M I A + PDP+ DFDG I IWRICVI+ AQR+S + R R ++YEFD TIDAEWY+ W D LPA++E MPWL + VV QQDGA+PHTGK P LN G GW LV QPAQSPDLNI D+G FASLK RV +ID LV
Sbjct: 177 EDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364
BLAST of mRNA_H-paniculata_contig2407.6514.1 vs. uniprot
Match: A0A6A4Z9D8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9D8_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.730e-31 Identity = 73/230 (31.74%), Postives = 116/230 (50.43%), Query Frame = 1
Query: 1 EETVRSTKVQHKSHIAKVMFIWAISHPD----PSRDFDGNIRIWRICVIKQAQRNSARRERGQQYEFDVTIDAEWYQGWCKDSFLPALEEMMPWLEGEEVVAQQDGATPHTGKDTPRKLNEIGRDGGWDTNLVIQPAQSPDLNIRDMGFFASLKSRVLRERYGTIDGLVEGVKSMHDAYDAATLGRVWQSLFKRYNLVLKALGGNDFEVQHTETKKRQRAGSLPKSVKFD 678
+E V + K + K HI KVMF+ A++ P R +DG I +W + A R+S R+RG T+ + Y+ + D +PA+ P + ++ QQD A PH + P + GR GGW +L QPAQSPDLN+ D+G+F +++S + T+D LV V + + L + + +L K + K G NDF++ H + + G LP ++ D
Sbjct: 66 DEAVPTRKCRSKKHITKVMFLTAVARPRYDARNKRMWDGRIGMWPFVKTRPALRSSKNRKRGDDVTEPFTVTRDVYRSFLIDKVIPAVRSKWPSSKKNQIWIQQDNAKPHVSVNDPAVV-AAGRQGGWTISLCSQPAQSPDLNVLDLGYFNAIQSLQHQMATYTLDDLVVAVVKSFEELECTVLDKTFMTLQKVMECIFKMGGDNDFKLPHQKKHGLVKEGPLPTRLECD 294
BLAST of mRNA_H-paniculata_contig2407.6514.1 vs. uniprot
Match: A0A6A4Z066_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z066_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.180e-27 Identity = 76/223 (34.08%), Postives = 111/223 (49.78%), Query Frame = 1
Query: 1 EETVRSTKVQHKSHIAKVMFIWAISHPDPSRDFDGNIRIWRICVIKQAQRNSARRERGQQYEFDVTIDAEWYQGWCKDSFLPALEEMMPWLEGEEVVAQQDGATPHTGKDTPRKLNEIGRDGGWDTNLVIQPAQSPDLNIRDMGFFASLKSRVLRERYGTIDGLVEGVKSMHDAYDAATLGRVWQSLFKRYNLVLKALGGNDFEVQHTETKKRQRAGSLPKSV 669
EE +R T + K I KVMF+ A+ P + FDG I IW A RNS R G V +D Y+ + + +PA++E P + + VV Q D ATPH D L ++ DG W + QP SPDLN+ D+GFFAS++S + ++D ++ D + L V+ +L LVL+ GGN F++ H +RAG+L +V
Sbjct: 27 EEVLRRT-CKSKRFIPKVMFLCAVGRPRQADGFDGKIGIWPFVSKTPAVRNSRNRPAGTMVTTLVNVDGATYRDYVLNKVVPAIKEKFPSVS-KRVVLQHDNATPHRSIDDAA-LAQVSTDG-WTFVVRRQPPNSPDLNVLDLGFFASIQSLQYKVVSRSVDDVIASTLMAFDMLNDEKLANVFLTLQAVMRLVLEHRGGNHFKLPHLHKDAMRRAGTLMLNV 245
BLAST of mRNA_H-paniculata_contig2407.6514.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA) HSP 1 Score: 120 bits (301), Expect = 1.220e-27 Identity = 66/211 (31.28%), Postives = 106/211 (50.24%), Query Frame = 1
Query: 1 EETVRSTKVQHKSHIAKVMFIWAISHPDPS----RDFDGNIRIWRICVIKQAQRNSARRERGQQYEFDVTIDAEWYQGWCKDSFLPALEEMMPWLEGEEVVAQQDGATPHTGKDTPRKLNEIGRDGGWDTNLVIQPAQSPDLNIRDMGFFASLKSRVLRERYGTIDGLVEGVKSMHDAYDAATLGRVWQSLFKRYNLVLKALGGNDFEVQH 621
+E K Q K HI KVMF+ A++ P + +DG + +W + A+R S R+RG +T+ Y+ + D +PA++ P G + QQD A PH D P L GR GW+ L+ QPAQSPD N+ D+GFF +++S + TID L++ V+ + L + + +L K +++ G N +++ H
Sbjct: 191 DEPTPQRKAQSKRHITKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVL-AAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEEAMRSSGDNVYKLPH 400
BLAST of mRNA_H-paniculata_contig2407.6514.1 vs. uniprot
Match: W2PEH8_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PEH8_PHYPN) HSP 1 Score: 115 bits (287), Expect = 8.610e-27 Identity = 69/220 (31.36%), Postives = 117/220 (53.18%), Query Frame = 1
Query: 25 VQHKSHIAKVMFIWAISHP--DPSRD--FDGNIRIWRICVIKQAQRNSARRERGQQYEFDVTIDAEWYQGWCKDSFLPALEEMMPWLEGEEVVAQQDGATPHTGKDTPRKLNEIGRDGGWDTNLVIQPAQSPDLNIRDMGFFASLKSRVLRERYGTIDGLVEGVKSMHDAYDAATLGRVWQSLFKRYNLVLKALGGNDFEVQHTETKK-RQRAGSLPKSV 669
V++K++I KVMF+ A++ P D R +DG I +W V + A+R+S R G +D + Y+ +P+++ + W G+ V Q D A PH D P + DGGWD ++ QPA SPD N+ D+GFFAS++S +++ TI+ LV V+ ++ + +T+ +V+ +L + G N +++ H ++ R G LP S+
Sbjct: 47 VKNKNYIVKVMFLVAVARPRWDSKRHRIWDGKIGLWPFVVYEPAERSSKNRPAGTLELKTYNVDKDVYRHALCRMVIPSVKVV--WPSGKRVFLQHDNAKPHVAADDPEVVAACS-DGGWDMSIKPQPANSPDFNVNDLGFFASIQSLQHKKKARTIEDLVNNVEEAYNQLEYSTIDKVFVTLQSVLQASMNVDGCNKYQLPHLSKEQLRMNNGLLPLSL 263
BLAST of mRNA_H-paniculata_contig2407.6514.1 vs. uniprot
Match: A0A6A4ECW5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4ECW5_9STRA) HSP 1 Score: 118 bits (295), Expect = 8.680e-27 Identity = 75/234 (32.05%), Postives = 116/234 (49.57%), Query Frame = 1
Query: 4 ETVRSTKVQHKSHIAKVMFIWAISHPDPSRD----FDGNIRIWRICVIKQAQRNSARRERGQQYEFDV-TIDAEWYQGWCKDSFLPALEEMMP-WLEGEEVVAQQDGATPHTGKDTPRKLNEIGRDGGWDTNLVIQPAQSPDLNIRDMGFFASLKSRVLRERYGTIDGLVEGVKSMHDAYDAATLGRVWQSLFKRYNLVLKALGGNDFEVQHTETKKRQRAGSLPKSVKFD*EA 687
ETV + + K I K MF+ A++ P + FDG I IW AQ +S R G ++ T++ E Y+ + + +PA++ P W + +V QQD ATPH P L G GW+ L QPA SPDLN D+G+FAS+++ RE I L++ ++ + A + L + +L V++A G N++++ H K +R G LP S D +A
Sbjct: 217 ETVPHRERKSKRFIGKTMFLAAVARPRFDNNGQVLFDGKIGIWDFTHKVDAQHSSKNRPAGTLETKNLDTVNREVYKRYLLEHIIPAIKSKWPVWDKSSPIVIQQDNATPHCQPTDPDIL-AAGVADGWNIRLAFQPANSPDLNTLDLGYFASIQALPYREDCCDIVQLIQAIRKSYAALEVYKLDNITLTLQSSMECVMRAAGSNEYKLPHAGKSKIRREGKLPHSFPCDLDA 449
BLAST of mRNA_H-paniculata_contig2407.6514.1 vs. uniprot
Match: A0A453NE83_AEGTS (Uncharacterized protein n=2 Tax=Triticeae TaxID=147389 RepID=A0A453NE83_AEGTS) HSP 1 Score: 113 bits (282), Expect = 2.080e-26 Identity = 75/227 (33.04%), Postives = 111/227 (48.90%), Query Frame = 1
Query: 4 ETVRSTKVQHKSHIAKVMFIWAISHPDPSRD----FDGNIRIWRICVIKQAQRNSARRERGQQYEFDV--TIDAEWYQGWCKDSFLPALEEMMPWLEGEE---VVAQQDGATPHTGKDTPRKLNEIGRDGGWDTNLVIQPAQSPDLNIRDMGFFASLKSRVLRERYGTIDGLVEGVKSMHDAYDAATLGRVWQSLFKRYNLVLKALGGNDFEVQHTETKKRQRAGSL 657
E + +HK+HI K+MF+ A++ P + FDG I +W + QAQ+ S R RG +E T+D E + + LPA++E W E + + QQD A H D P L E R GGWD ++ QP SPD NI D+G+FAS+++ R+ T+ +V+ V Y L R+W S ++K G + V H + K +R G L
Sbjct: 26 ENAPHRECKHKNHIQKIMFLSAMARPRYAAQGNCVFDGKIGVWAYTEMVQAQKKSQNRLRGT-WELKPCHTVDREKSREYLVKYVLPAIKEK--WPESDRWNTIYVQQDNARTHIKPDDPLFLQEAAR-GGWDIRMIYQPPNSPDTNILDLGWFASIQAMFHRKMPKTLAEIVQKVNQSLAEYPHQKLNRIWLSHQACMREIIKHKGSIHYAVPHLKKKALERQGLL 248
BLAST of mRNA_H-paniculata_contig2407.6514.1 vs. uniprot
Match: I6THG9_PSEMU (Tranposase n=1 Tax=Pseudo-nitzschia multiseries TaxID=37319 RepID=I6THG9_PSEMU) HSP 1 Score: 117 bits (293), Expect = 2.300e-26 Identity = 72/227 (31.72%), Postives = 115/227 (50.66%), Query Frame = 1
Query: 34 KSHIAKVMFIWAISHP----DPSRDFDGNIRIWRICVIKQAQRNSARRERGQQYEFDV-TIDAEWYQGWCKDSFLPALEEMMP--WLEGEEVVAQQDGATPHTGKDTPRKLNEIGRDGGWDTNLVIQPAQSPDLNIRDMGFFASLKSRVLRERYGTIDGLVEGVKSMHDAYDAATLGRVWQSLFKRYNLVLKALGGNDFEVQHTETKKRQRAGSLPKSVKFD*EAST 693
K I KVMF+ A++ P D + FDG I IW V + AQRNS R RG ++ +++A YQ + LPA++E P W + + Q+D A PH + + + E R+ GW+ + QP SPD N+ D+GFFAS+++ ++R ID L+ V+ L ++ SL +K G N ++++H +K + +LP S+ D + T
Sbjct: 265 KRFIEKVMFLCAVARPRHDADRNAGFDGKIGIWPFVVKEPAQRNSVNRPRGTMVTKNIPSVNAAEYQKMMLEKVLPAIQEKFPVCW-KSRPIFIQEDNAKPHHLR-SRAAVREAAREAGWNITVTTQPPNSPDFNVLDLGFFASIQALQYKKRAKNIDQLIANVEEALVETSTIALNSIFLSLQCALEESIKVQGNNSYKLRHMGKEKLLKEDNLPVSITCDADTVT 489
BLAST of mRNA_H-paniculata_contig2407.6514.1 vs. uniprot
Match: J3S7K7_BETVV (Mariner transposase n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=J3S7K7_BETVV) HSP 1 Score: 117 bits (292), Expect = 3.500e-26 Identity = 78/224 (34.82%), Postives = 117/224 (52.23%), Query Frame = 1
Query: 28 QHKSHIAKVMFIWAISHP--DPSRD--FDGNIRIWRICVIKQAQRNSARRERGQ-QYEFDVTIDAEWYQGWCKDSFLPALEEMMPWLEGEEVVAQQDGATPHTGKDTPRKLNEIGRDGGWDTNLVIQPAQSPDLNIRDMGFFASLKSRVLRERYGTIDGLVEGVKSMHDAYDAATLGRVWQSLFKRYNLVLKALGGNDFEVQHTETKKRQRAGSLPKSVKFD*E 684
Q K+ I KVMF+ AI+ P P+ D +DG I I+ +AQR SA R G + + +I E + + LPA+ P +E+ QQD A PH + L E R+GG++ N++ QPAQSPDLNI D+GFF +++S + T+D L++ V+ + Y+ + W L +LK GGN+++ H KK R G LP +V+ E
Sbjct: 265 QSKAFITKVMFLAAIARPWLGPTGDILWDGKIGIFPFIDEVRAQRWSANRPAGTIEKKAKQSITKETIREMIINKLLPAIRAKWPENGCKEIWIQQDNARPHIQPNDAEFL-EACREGGFEINIICQPAQSPDLNILDLGFFKAIQSIQHQSFPKTVDELIKSVEDAYTVYEPRIINYTWIHLMYVMVEILKVKGGNNYKNPHNSKKKMDRLGLLPTTVEISEE 487
BLAST of mRNA_H-paniculata_contig2407.6514.1 vs. uniprot
Match: A0A6A4XKU3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4XKU3_9STRA) HSP 1 Score: 115 bits (287), Expect = 5.600e-26 Identity = 77/216 (35.65%), Postives = 108/216 (50.00%), Query Frame = 1
Query: 34 KSHIAKVMFIWAISHP--DPSR--DFDGNIRIWRICVIKQAQRNSARRERGQQYEFDVTIDAEWYQGWCKDSFLPALEEMMPWLEGEEVVAQQDGATPHTGKDTPRKLNEIGRDGGWDTNLVIQPAQSPDLNIRDMGFFASLKSRVLRERYGTIDGLVEGVKSMHDAYDAATLGRVWQSLFKRYNLVLKALGGNDFEVQHTETKKRQRAGSLPKSV 669
K I KVMF+ A+S P D R +FDG I +W I A RNS R V +DA Y+ + +PA++ P E + VV Q D ATPH G T L + DG W + QP QSPDLN+ D+G FAS+++ L+ T+D ++ + + TL +V+ +L LVL+ GGN F + H RAG+L +V
Sbjct: 182 KRFIPKVMFLAAVSRPRYDNVRGENFDGKIGMWPIVEYLPAVRNSRNRPAWTMIPTSVNVDARVYRDYVLTQVIPAIKAKFP-TENKRVVLQHDNATPHGGI-TDADLECVSTDG-WSFVVRCQPPQSPDLNVLDLGLFASIQALQLKLFCRTVDDVIRATLAAFERSGGETLTKVFLTLQAVMRLVLENNGGNQFRLPHLRKDAMHRAGALMSNV 394 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2407.6514.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2407.6514.1 >prot_H-paniculata_contig2407.6514.1 ID=prot_H-paniculata_contig2407.6514.1|Name=mRNA_H-paniculata_contig2407.6514.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=209bp MFIWAISHPDPSRDFDGNIRIWRICVIKQAQRNSARRERGQQYEFDVTIDback to top mRNA from alignment at H-paniculata_contig2407:10626..11450+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2407.6514.1 ID=mRNA_H-paniculata_contig2407.6514.1|Name=mRNA_H-paniculata_contig2407.6514.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=825bp|location=Sequence derived from alignment at H-paniculata_contig2407:10626..11450+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2407:10626..11450+ >mRNA_H-paniculata_contig2407.6514.1 ID=mRNA_H-paniculata_contig2407.6514.1|Name=mRNA_H-paniculata_contig2407.6514.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1254bp|location=Sequence derived from alignment at H-paniculata_contig2407:10626..11450+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |