prot_H-paniculata_contig24051.6511.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24051.6511.1
Unique Nameprot_H-paniculata_contig24051.6511.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length177
Homology
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BLAST of mRNA_H-paniculata_contig24051.6511.1 vs. uniprot
Match: D7G7D8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7D8_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 1.170e-84
Identity = 123/177 (69.49%), Postives = 148/177 (83.62%), Query Frame = 0 
Query:    1 MMDQLRPNLDFCAACTLVRPKELARVSAAFEAAFPAPNDGKDRCEFVAAVPMSVAFRDWKTFRGISATGTPDGVPSTPEKIRLFPRTRKGERLLQDAGVRQGMRWSATPYRPWKTLERMASHDQHWDENQDMYVLCAGYEDTSRANGVCIELSATGHVKADDDGDGVKAGTRVAREV 177
            +MDQLR ++D+C++  LVRP EL RVSAAF+AAFPAPNDGKDRC+FVAAVP+ +A+ DW+ +RGIS TGTPDGVPS P++I+L+PRTRKGERLLQD   R GMRWS TPYRPWKTLERMA+HDQ+W+ NQD Y+LCAGYE     +GV IELS T  +KA+D GDG +AG RVAREV
Sbjct:   62 IMDQLRASIDYCSSWMLVRPHELVRVSAAFQAAFPAPNDGKDRCDFVAAVPVRLAYNDWQRYRGISTTGTPDGVPSNPQQIQLYPRTRKGERLLQDPQNRVGMRWSPTPYRPWKTLERMATHDQYWESNQDHYLLCAGYEAFPPGSGVYIELSVTDMMKAEDAGDGQRAGARVAREV 238
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24051.6511.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7D8_ECTSI1.170e-8469.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24051contigH-paniculata_contig24051:280..3625 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24051.6511.1mRNA_H-paniculata_contig24051.6511.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24051 250..3625 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24051.6511.1 ID=prot_H-paniculata_contig24051.6511.1|Name=mRNA_H-paniculata_contig24051.6511.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=177bp
MMDQLRPNLDFCAACTLVRPKELARVSAAFEAAFPAPNDGKDRCEFVAAV
PMSVAFRDWKTFRGISATGTPDGVPSTPEKIRLFPRTRKGERLLQDAGVR
QGMRWSATPYRPWKTLERMASHDQHWDENQDMYVLCAGYEDTSRANGVCI
ELSATGHVKADDDGDGVKAGTRVAREV
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