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Homology
BLAST of mRNA_H-paniculata_contig110.650.1 vs. uniprot
Match: D7G8X1_ECTSI (Histone deacetylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X1_ECTSI) HSP 1 Score: 236 bits (603), Expect = 5.560e-63 Identity = 121/191 (63.35%), Postives = 140/191 (73.30%), Query Frame = 2
Query: 188 LGKVSFPAGGAVPRPERGKGAGLT*MFR*NKVMGCGDNTFMHVFSTTLSSVVEAFRPEAAVLLCGADTLAADPLGPFNLTSGGVRACVEQVVALDIPLLLLGGGGYCPTDTARMWTTLTAAAVGPEALAALPVSVPDHAYFPLYGPDFRLATKPKTLKDNNDSAFLAELGDFATQATRRV-ASSLARENSL 757
+ K FP G E G G G GCGD +F+ VF++ +V EAF+PEA VLLCGADTL+ADPLGPFNLTS GVR+C+E V+AL++PLLLLGGGGYCPTDTAR+WT+LTAAAVG +ALAALP +VPDH YFPLYGPDFR+ATK KTL D ND FL L DFA QA RRV A+ RE SL
Sbjct: 602 VSKGFFPGAGQCS--ETGAGNGRDYNLNIPLKEGCGDASFLRVFTSAFQAVTEAFQPEAVVLLCGADTLSADPLGPFNLTSAGVRSCLELVMALELPLLLLGGGGYCPTDTARLWTSLTAAAVGADALAALPATVPDHCYFPLYGPDFRMATKEKTLPDKNDDDFLDRLSDFAAQAGRRVRAAKKKRERSL 790
BLAST of mRNA_H-paniculata_contig110.650.1 vs. uniprot
Match: A0A6H5JLL7_9PHAE (Histone deacetylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL7_9PHAE) HSP 1 Score: 235 bits (600), Expect = 9.840e-63 Identity = 121/191 (63.35%), Postives = 142/191 (74.35%), Query Frame = 2
Query: 188 LGKVSFPAGGAVPRPERGKGAGLT*MFR*NKVMGCGDNTFMHVFSTTLSSVVEAFRPEAAVLLCGADTLAADPLGPFNLTSGGVRACVEQVVALDIPLLLLGGGGYCPTDTARMWTTLTAAAVGPEALAALPVSVPDHAYFPLYGPDFRLATKPKTLKDNNDSAFLAELGDFATQATRRV-ASSLARENSL 757
+ K FP G E G G G GCGD++F+ VF++ L +V AF+PEA VLLCGADTL+ADPLGPFNLTS GVR+C+E V+AL++PLLLLGGGGYCPTDTAR+WT+LTAAAVG +ALAALPV+VPDH YFPLYGPDFR+AT+ KTL D ND FL L DFA QA RRV A+ RE SL
Sbjct: 576 VSKGFFPGAGQCS--ETGAGNGRHYNLNIPLKEGCGDSSFLRVFTSALQAVTGAFQPEAVVLLCGADTLSADPLGPFNLTSAGVRSCLELVMALELPLLLLGGGGYCPTDTARLWTSLTAAAVGADALAALPVTVPDHCYFPLYGPDFRMATRKKTLPDKNDDDFLDRLCDFAAQAGRRVRAAKKKRERSL 764
BLAST of mRNA_H-paniculata_contig110.650.1 vs. uniprot
Match: A0A835YMW5_9STRA (Histone deacetylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMW5_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.000e-32 Identity = 79/171 (46.20%), Postives = 99/171 (57.89%), Query Frame = 2
Query: 203 FP-AGGAVPRPERGKGAGLT*MFR*NKVMG--CGDNTFMHVFSTTLSSVVEAFRPEAAVLLCGADTLAADPLGPFNLTSGGVRACVEQVVALDIPLLLLGGGGYCPTDTARMWTTLTAAAVGPEALAALPVSVPDHAYFPLYGPDFRLATKPKTLKDNNDSAFLAELGDFA 706
FP GA RG+GAG + N + C D + VF + V+AFRP VL CGAD L ADP+G NLT+ G++ACV +V+A +P L+LGGGGY TAR+WT LTA A+G A ALP SVPDH +F YGP F + T P+ L+D N L D A
Sbjct: 186 FPHPAGAPHETGRGRGAG----YNVNVPLAERCCDAAYQGVFDAVXXAAVDAFRPACVVLQCGADALGADPIGRLNLTTRGLQACVRRVIAARLPTLVLGGGGYDGAATARLWTALTATAIGEGAEEALPSSVPDHPHFARYGPSFDMHTAPRRLRDANAPEALRAARDRA 352
BLAST of mRNA_H-paniculata_contig110.650.1 vs. uniprot
Match: A0A7S3I0A1_9SPIT (Histone deacetylase (Fragment) n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3I0A1_9SPIT) HSP 1 Score: 132 bits (332), Expect = 8.280e-32 Identity = 62/93 (66.67%), Postives = 76/93 (81.72%), Query Frame = 1
Query: 4 HHAKKGEAAGFCYVNDVVLAVLHMTKRFRRVLTIDIDVHHGDGMQDAFYMSDKVMTVSFHHLGKGFFPGGGGCSETGAGKGRGFNLNVPLKQG 282
HHAKK EA+GFCYVND+VLA+L + K RVL IDIDVHHGDG+++AFY +++VMTVSFH G FFPG G ETGAG+G G++LNVPLK+G
Sbjct: 71 HHAKKQEASGFCYVNDIVLAILELLKYHNRVLYIDIDVHHGDGVEEAFYTTNRVMTVSFHRYGD-FFPGTGDLKETGAGEGLGYSLNVPLKKG 162
BLAST of mRNA_H-paniculata_contig110.650.1 vs. uniprot
Match: A0A5J4T9I6_9EUKA (Histone deacetylase (Fragment) n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4T9I6_9EUKA) HSP 1 Score: 129 bits (323), Expect = 5.410e-31 Identity = 58/93 (62.37%), Postives = 75/93 (80.65%), Query Frame = 1
Query: 4 HHAKKGEAAGFCYVNDVVLAVLHMTKRFRRVLTIDIDVHHGDGMQDAFYMSDKVMTVSFHHLGKGFFPGGGGCSETGAGKGRGFNLNVPLKQG 282
HHAKKGEA+GFCY+ND+VL +L + K RV+ IDIDVHHGDG+++AFY +D+VMTVSFH G GFFPG G + GAGKG+ +++NVPL+ G
Sbjct: 46 HHAKKGEASGFCYINDIVLGILELLKCNPRVMYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYG-GFFPGTGSIKDIGAGKGKYYSINVPLRDG 137
BLAST of mRNA_H-paniculata_contig110.650.1 vs. uniprot
Match: A0A6V7LRI3_9HYME (Histone deacetylase (Fragment) n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7LRI3_9HYME) HSP 1 Score: 129 bits (325), Expect = 5.920e-31 Identity = 59/93 (63.44%), Postives = 74/93 (79.57%), Query Frame = 1
Query: 4 HHAKKGEAAGFCYVNDVVLAVLHMTKRFRRVLTIDIDVHHGDGMQDAFYMSDKVMTVSFHHLGKGFFPGGGGCSETGAGKGRGFNLNVPLKQG 282
HHAKK EA+GFCY+ND+V+A+L + K RVL IDIDVHHGDG+Q+AFY++D+VMTVSFH G FFPG G E GA GR +++NVPLK+G
Sbjct: 74 HHAKKFEASGFCYINDIVIAILELLKYHARVLYIDIDVHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEG 166
BLAST of mRNA_H-paniculata_contig110.650.1 vs. uniprot
Match: A0A4Q1BLY5_TREME (Histone deacetylase n=2 Tax=Tremella mesenterica TaxID=5217 RepID=A0A4Q1BLY5_TREME) HSP 1 Score: 137 bits (344), Expect = 7.100e-31 Identity = 62/93 (66.67%), Postives = 76/93 (81.72%), Query Frame = 1
Query: 4 HHAKKGEAAGFCYVNDVVLAVLHMTKRFRRVLTIDIDVHHGDGMQDAFYMSDKVMTVSFHHLGKGFFPGGGGCSETGAGKGRGFNLNVPLKQG 282
HHAKKGEA+GFC++ND+VLA+L + + RVL IDID+HHGDG+QDAFY+SD+V+TVSFH G FFPG GG SETGA G+ F +NVPLK G
Sbjct: 174 HHAKKGEASGFCFINDIVLAILELLRVHPRVLYIDIDIHHGDGVQDAFYLSDRVLTVSFHKYGGLFFPGTGGLSETGAKDGKNFAINVPLKDG 266
BLAST of mRNA_H-paniculata_contig110.650.1 vs. uniprot
Match: A0A3P6RJ35_CYLGO (Histone deacetylase n=1 Tax=Cylicostephanus goldi TaxID=71465 RepID=A0A3P6RJ35_CYLGO) HSP 1 Score: 128 bits (321), Expect = 1.170e-30 Identity = 57/93 (61.29%), Postives = 72/93 (77.42%), Query Frame = 1
Query: 4 HHAKKGEAAGFCYVNDVVLAVLHMTKRFRRVLTIDIDVHHGDGMQDAFYMSDKVMTVSFHHLGKGFFPGGGGCSETGAGKGRGFNLNVPLKQG 282
HHAKK EA+GFCYVND+V+A+L + K +RVL +DID+HHGDG+Q+AFY +D+VMTVSFH G FFPG G + G G G F +NVPL+QG
Sbjct: 17 HHAKKAEASGFCYVNDIVIAILELLKYHKRVLYVDIDIHHGDGVQEAFYFTDRVMTVSFHKYGSLFFPGTGSIYDQGQGAGHYFAVNVPLQQG 109
BLAST of mRNA_H-paniculata_contig110.650.1 vs. uniprot
Match: A0A1B6H6F8_9HEMI (Histone deacetylase (Fragment) n=1 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6H6F8_9HEMI) HSP 1 Score: 127 bits (318), Expect = 2.970e-30 Identity = 57/93 (61.29%), Postives = 74/93 (79.57%), Query Frame = 1
Query: 4 HHAKKGEAAGFCYVNDVVLAVLHMTKRFRRVLTIDIDVHHGDGMQDAFYMSDKVMTVSFHHLGKGFFPGGGGCSETGAGKGRGFNLNVPLKQG 282
HHAK+ EA+GFCYVND+VL +L + K + RVL IDIDVHHGDG+++AFY+SD+VMT+SFH G +FPG G + G KGRG+++NVPLK G
Sbjct: 36 HHAKRAEASGFCYVNDIVLGILELLKVYERVLYIDIDVHHGDGVEEAFYISDRVMTLSFHKYGD-YFPGTGRLEDIGYAKGRGYSVNVPLKDG 127
BLAST of mRNA_H-paniculata_contig110.650.1 vs. uniprot
Match: A0A0B1S8N3_OESDE (Histone deacetylase (Fragment) n=1 Tax=Oesophagostomum dentatum TaxID=61180 RepID=A0A0B1S8N3_OESDE) HSP 1 Score: 127 bits (320), Expect = 4.810e-30 Identity = 58/93 (62.37%), Postives = 72/93 (77.42%), Query Frame = 1
Query: 4 HHAKKGEAAGFCYVNDVVLAVLHMTKRFRRVLTIDIDVHHGDGMQDAFYMSDKVMTVSFHHLGKGFFPGGGGCSETGAGKGRGFNLNVPLKQG 282
HHAKK EA+GFCYVND+V+A+L + K +RVL IDID+HHGDG+Q+AFY +D+VMTVSFH G FFPG G + G G G F +NVPL+QG
Sbjct: 75 HHAKKAEASGFCYVNDIVIAILELLKYHKRVLYIDIDIHHGDGVQEAFYFTDRVMTVSFHKYGGLFFPGTGSIYDLGQGAGHYFAVNVPLQQG 167
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 237.7 |
| Seed ortholog evalue | 4.3e-60 |
| Seed eggNOG ortholog | 2880.D7G8X1 |
| Preferred name | HDAC8 |
| KEGG ko | ko:K04429,ko:K06067,ko:K07190,ko:K11405,ko:K11482 |
| KEGG Pathway | ko04010,ko04020,ko04110,ko04213,ko04330,ko04910,ko04919,ko04922,ko05016,ko05034,ko05165,ko05169,ko05200,ko05202,ko05203,ko05220,map04010,map04020,map04110,map04213,map04330,map04910,map04919,map04922,map05016,map05034,map05165,map05169,map05200,map05202,map05203,map05220 |
| KEGG Module | M00688,M00689 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000118,GO:0000122,GO:0000228,GO:0000819,GO:0003674,GO:0003682,GO:0003824,GO:0004407,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005829,GO:0005886,GO:0006325,GO:0006333,GO:0006342,GO:0006355,GO:0006357,GO:0006464,GO:0006476,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0007063,GO:0008134,GO:0008150,GO:0008152,GO:0009719,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010639,GO:0014070,GO:0016020,GO:0016043,GO:0016458,GO:0016569,GO:0016570,GO:0016575,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018205,GO:0019213,GO:0019219,GO:0019222,GO:0019538,GO:0022402,GO:0030278,GO:0030279,GO:0030544,GO:0031056,GO:0031057,GO:0031072,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031647,GO:0031974,GO:0031981,GO:0032204,GO:0032268,GO:0032269,GO:0032879,GO:0032880,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033558,GO:0033993,GO:0034983,GO:0035065,GO:0035067,GO:0035601,GO:0035690,GO:0035983,GO:0035984,GO:0036211,GO:0040029,GO:0042221,GO:0042493,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045595,GO:0045596,GO:0045667,GO:0045668,GO:0045814,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046677,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051093,GO:0051098,GO:0051101,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051716,GO:0051726,GO:0051879,GO:0051983,GO:0060255,GO:0060341,GO:0061478,GO:0061587,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070887,GO:0070933,GO:0071236,GO:0071310,GO:0071396,GO:0071407,GO:0071417,GO:0071495,GO:0071704,GO:0071840,GO:0071922,GO:0071944,GO:0080090,GO:0097305,GO:0097306,GO:0098732,GO:0098813,GO:0140096,GO:1901564,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901983,GO:1901984,GO:1902275,GO:1902494,GO:1902679,GO:1902680,GO:1903320,GO:1903321,GO:1903506,GO:1903507,GO:1903508,GO:1903827,GO:1904321,GO:1904322,GO:1905268,GO:1905634,GO:2000112,GO:2000113,GO:2000615,GO:2000616,GO:2000756,GO:2000757,GO:2001141,GO:2001251 |
| EggNOG free text desc. | NAD-dependent histone deacetylase activity (H3-K14 specific) |
| EggNOG OGs | COG0123@1,KOG1342@2759 |
| Ec32 ortholog description | Histone deacetylase |
| Ec32 ortholog | Ec-15_004560.1 |
| EC | 2.7.11.1,3.5.1.98 |
| COG Functional cat. | BQ |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01001,ko03036 |
| Exons | 7 |
| Model size | 2448 |
| Cds size | 534 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig110.650.1 >prot_H-paniculata_contig110.650.1 ID=prot_H-paniculata_contig110.650.1|Name=mRNA_H-paniculata_contig110.650.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=178bp
MGCGDNTFMHVFSTTLSSVVEAFRPEAAVLLCGADTLAADPLGPFNLTSG
GVRACVEQVVALDIPLLLLGGGGYCPTDTARMWTTLTAAAVGPEALAALP
VSVPDHAYFPLYGPDFRLATKPKTLKDNNDSAFLAELGDFATQATRRVAS
SLARENSLELTPCRAYDDACTVDGDSW* back to topmRNA from alignment at H-paniculata_contig110:33360..45153+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig110.650.1 ID=mRNA_H-paniculata_contig110.650.1|Name=mRNA_H-paniculata_contig110.650.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11794bp|location=Sequence derived from alignment at H-paniculata_contig110:33360..45153+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGCATCACGCGAAGAAGGGCGAGGCGGCGGGTTTTTGCTACGTGAACGA
TGTCGTTTTGGCGGTGCTGCACATGACCAAGAGATTCAGAAGGGTGCTCA
CCATCGATATAGGTATGTATGTATTTATGTTTGTATGTATTTACAGTCAG
AGTAATGGGATTCGGTTCGTTGAGGTAAGAGACTCACGGCATGGCATTTT
TTGTTAAGTCCAAGCGTTTTTCTAACATCCGTGGGAAAGTCGATTTCTGT
CATTCAGTAAAACCAAGTTCAGTACAATTTATGGTCGACCCGAATATTAG
TCATTTTGATGTTTTTCGGCAGGGCAGATAACTCACTACTTACTTCATTT
TAGTATGCAACTGGTTGACCCAATTTTAGACCATTATTTGCTTGGCGAGG
CATTAAATTTAGCGCCCTAAAATCGGATCTACTATAGTACTTTTTTACAT
CCACTTATCGTAAGTCACGGTGAGTTAAAAAACGTTGGGTCCAAAACCTC
ATCATCACTTTTTGATTTGCACAAGGAATGATTGTGCGTGTTGTATAATG
AGGCCTAGGGGCTGAATTTCCGATTTTCATGGTGAAAGTTTTACAGAAGG
TTGTAAAAAAAAAATTCCGACTCTAGTAAGACATGTTCTTAAACAGCACC
CTCCTTCCGTCTTTGGTCATTCTTCACGGTTTTCAGAGCAGACGTAGATG
GCCCGGAGCTCATTTAGAAATAAACGTGCTTACACATGCTGGACGTTGAG
CTTTGAAGCGAACATTTTTTGGATTTTCGTTGCAAATGCTCCGGTGGGGG
GTATTCATCCCGGAGGGTGATTTAAAAAAGAAAAAATCAAGTTTGTCCGA
AGAAGAGCGCTTCCATTTTCCCTTTTGTGTGATGTTGTGTACCTGTCAAC
ACACTGTCACAACATGATGTCTCCTTGGCAGGCGCCGTCTAATTGACTGG
GCGAATATAAGTTTTTATTCAGGAAGTGATGTCGATAGACACCAGTCCAT
AGTGCACTTGTGTTTGATTCCGGTGGATGATGTCGATACAATCAAGCGTG
GCACGATACTCTTCACCTATTTTTCTTGAGTTTTTTTTATTACATCGTGG
TCTGCACACGCATTTAAGTTCTAAATGCTTGAAGATACTATGACCGATGG
TTGTGTTCCTCATACTACCAGCGCGTCCCTGGTAGGGTATGACCTCATGT
AATGACAACTGGAGTATGCGTGGCGTCTTTAAAAGTCCATGGCTCGTTCC
ATGATGTTGAAATTGGAGCGAGGTCATTTTTGTGGTGGGTGGACTTTTTG
GATGCGGCGAATCTGTTGATTGAAAACACAGGGTATTCTCGTGTTTTTTT
GTTTGTTTTTTTATCCGCCTATACAACGAGTACCATTGAGAAAAGCAGTA
TCCTAAAAGTACCACGATAAAGCTACACCCTTGGGAACAATATATCGGCG
TTTGGTTTTTTTCAAAGTCCAAGTGGTCATCGTGTCATTATTCAGTAATT
TGGAGAAAACCATGATAGCTACTTGGATTTTGAAAAGAATAACGCCGATA
TATAGTTCCCACGGAGTATAGCTTTATCGTGGTTTTTTTAGAATATTGCT
TTCCTGAATGGTACTCGTTTTATATGCGGTTTAAAAAACATATATGTACT
AATATGCCGAGAACATGCCTTTCTTAGAAATGTCATGTGTCATCTGGTGG
TCATCACAAGTGTAAGTGTATCATCGACGCGCAGAACTCGGCCTCGTGGA
CACCAGAGAGCCCCAAACCACCTCGCGAGAGCACTGTGGGGCATGGGTAA
TGCGCCTGTGCCTGCGGCAAACGTATGGCGCAGCTTTCGGACGTCGCGCA
GCAGCGTGCGAACAGAGCATATCTGTGATGACCTTATACTTTCAAAGTTT
GTGGCGAAAAAACAGATGGTGGGTTGTGTTCAGAAACCTATATAAACCAC
GCTGACTGTAGGTCATTGCCACTGGGGTCGACCAAACGAACATATGCCGA
CCGTTTCAGTGTCTATGTTGCTTGACTGATCGCTGACTGGCGGCTGCCAG
CGAGTCATTTGCAAGCTCACGATAAATGTATTGAGGCGGGAGCCTCCTTC
TGTAGCACGCATTTCGGTGGGGCGCTATTTGCTTGGCCCTTCTACTTAAC
GCATCATGTAGGCATGTGTTGGTGTGTTGTGGGGTACTTACTCCTGGTAA
AATAGAACTGGTCGGATAAAACAAACGATGATTAAATTTAGCAAAAAAGA
GTCATATCTTGTTTTCTGTTGTATTTCCTCATCATTTTTTTGCACGTCGC
GTTTAGTCCCATCTTGGCTGAACGTTTAAAGACCCTGCCTCACACCCCCT
TTTGTGTGTTCTAAGCATGGCATGTGCAAAGGCTCGTCTGGAACGATCGC
GTTCTTCGCCTGCACGGCGTGTTGGTAGATGTGCAAATGGTATACAGGAA
ACACATTTCCCGGTCCTCGTCAGCCAAACACGCCGCCTTTTTTTATGTAC
TCTTGTAATTCGTTTTACATGGGTTGTAACACTGGTGAGTGGTCCATTGT
GCCTGAGAGTTGAGAGTGAGCCATGTTTCTTGACTTCAAAAGGAAGAAGC
GATTTTCGAAATTGAGTGATTTTCCAGAGCTTGCCCAAGTATACATGAAT
TTGTGATTGGCGCAACTTTCATGCGTAAAATGCGGGTCCCTTGTTGCGCC
AATCAGAACTACGCATACTCTTGGAAGAGCTCTGGAAAATAGCTCACTTT
TGAAGTCAAGAGACATGGCCTGATGAGTCACTCGGTAAAATACTTCTTTT
TGTTTCTTTCAGCACAAAGATCGCCAACGGTTCTCACCTCTTTCATCTTT
CAGATATTTCCGTTGGAAATCGTATTTTCAACACGTACTATTTAATTAAC
TGTTGAATCGGCAACCGCTTACCCTTCGCCCCAACGCCTGCTGTAACCTT
CCGTGCCAAACCTGCGGTCGTGCCTTTTTTTTTTTTTTTTGGGGGGTGCT
GGCTGATGCGTGTTTTTGTTCAATGCATTGCTGGTGGCGCGCACCTTTTG
TGTGGTGACGTGCACATGCATAGATGTTCATCATGGAGATGGTATGCAGG
ATGCCTTCTACATGTCGGACAAGGTGCGAGCAGTTCTAGGAAGTCCAGCA
GAAAAACACTAAAAATAAATCGGAACGTATGCACGTCGTCACGTCCCGTT
TTTCTATTTCTAGTTATTTCAGGTTTGAGAATTTCGTTAAAAATAAGCCA
TCATCCACGTAGTATATTTTGTAAAACACGCGAATAAAGTGTGAGGAATC
GTTGCTGTTCCAAAGCAGTGATTAGCCCAGCGTTGTTTGAACAATGTTGC
GGATAATAGTCTATAGAAAGGCATGGTTTCCGTAAGTTCCAGTCGAGGAT
AAACTTTACCCTCAAGCCCGGAGAGGGAGGTATATGCCGCACCTGGGTGC
GAACGTTTTCGAAATATCATGATTACCTCTAAGAGCTAGGGCGCCACTGA
GAGCGAATAGTGTGCTGTTGGGAAGATCTTGCGGAGATCCATTTCTCGAT
TGACGGGGTTTTATATCGACCGCGTCATGTCTCCGTTCTCGCCCCGGTAG
TGATGATACCTCCGGGTTTGTTTTACTTTACTTCGTGTTTTATTTGATCG
AAAAGATGTCAGGGATTGTTGTATGTTTCACGGGTGTATTCTGTGAGACC
CCCGTCTCGGGCAGCGCTATAACGTGTCTTGTTCATGGTTAATCCTTTAG
CTTGATACGGTATTAGTAATCGGTAAGGTGGTGGTGGTGGTGGTGGTCGT
CGTCGTTGTCATCATTCCGGAACATTTTTTTCATTCTGTATTCGAGTCAA
TCCTGAAAAAATAAATCTTTTTGAGAACGTAGCGCGCGCCGCGGCAAATG
CAGCGAGTCTGTCGGTAGAGGACAAGCATGATCTATCAGGGCGTAGCCAT
GGTCATACTCTACTACTGTACTAGTGGAGTGTAAATGTACGAGTGACTGC
AAGAGTTGGTTGACGCAACGTCGTTTGATTCTTCGTACAGTGTTGTATAG
TCATTATATTGGCAACGCTGATTTTGTGCCTTGAGTGGCGTGCTTTTTTT
TCACAGCACTACTCGAGGTGTAACGGTGACCAATGATCACTAAAAAGGAA
ACCGCCTCCTTTTTTTGTACCTGGGAGTTTATTTTACCATTACTGAAAAA
AAAGTTGACAGATTTTTGTTCGTATTAATGACTTGATTGATTAACCTTTT
CAAGAGCCGAATCTGGTAACGATACATATATATATATATATATATATATA
TATATTACATTTTCACATCAGCCCGCCGTGGAAAATGACGAAAGCATCCA
CGAAATGCTTCCAATCAGCTGTGGTAGACTACTGGTTAGGATGTCTAAGG
TTCTGAACGGAGGTCGTGTTTTTCCCCGATGGGTACAGTCTAGAGCGAGA
ACGAACCGGCAAAAACACCTTCCTTTTTTTTTTGTCATAACGACCGAAGG
TTACACAAGCCTTTTCTTCACATGTGGTGAGGGGGTTCCTAGGCTCGCGA
AAGGTTTTTGTGAAGTAAAAATTGATTTGTTGTTATCAAGACCATGCAAA
CGGTGAGCACGTTTCCGCTGAAAGTGTTGAAACTCAACTACTGCGGGACG
CAGCCTTGTGAGAGATCTTTCATCCTGAGTTTTTTTTTTGGATTTTTTTG
GATAATAGAAAAGAGGTTTATAAATATCAGACCTCGGGGTGCAACCCATC
ACAGATCTTCTTTTTTGGCACCTAGATTTATTTGCTTAGAACGCTCGAAA
AAATGCTGATTTCCAACACGAGTTGGGCGGAGTAATTATTTCAACGATTT
TTCGATTTTCAGCGTTCACGGAAGGTTAGATAAGGCGGCCAGACCAAAAG
AATTTGGGTACCAACCTCCTGACTTCAACAGGCAACGGTTGGAGTAGAAG
GTGCTGGTGTTGCGGTCTAACAAATGCGTCGAAATTGTGGATAATGACAC
ACGATGACCATTAGAAGTGTGGTGGGCTTGAGCTTTCCCCCCCCCCCGTG
AAACAAAATCTTCGGGAGTTCAAAAAGGCAAAATTGTATATGTGAATACT
CTGGAAGCTCCGCCGAACAATCGTCGCATCCATCAACTTATTTCAATGTG
TACTGCTGTATATCGAATGCTTGCAGTATATCATGCTGAGATTATTCGGC
CAATACTTGATGATCACAGCTACATGCATATTTCCATCAACCGAGTTCAA
ATAGTATAAAGAGAGGGTTGGGGGCGCGCTGGGGCGGGGTAGGGGTAGGC
CATACTCGTATAATTATTTGATTCTATTACGGTAATAAGAGTTAATGGTG
TCACTATAGCCACTGCTTTCTCCGTTCGCAAACTTGCTCTTGCTTTTCAT
GGTCCTTTTTTTTTTTTTTTTTTCCTAAACCATTTTGTTTTTGGGGTTGG
TACCATATCCGTTTCGCTTGTACCTATCTTGATGGTACTGCTTTCCGCCG
CTAGGTCATGACCGTAAGCTTCCATCATCTTGGGAAAGGTTTCTTTCCCG
GCGGGGGGGGCTGTTCCGAGACCGGAGCGGGGAAAGGGCGCGGGTTTAAC
TTGAATGTTCCGCTGAAACAAGGTAATGGGTGTCTGTGTGTCTTCGTGTG
TTCGTGTATCCATATCTGCCTATGCCCGTCTGCATCCGTCTGTCTCCGTC
TGTCTCCGTTAGGGTGTTATTTTTCTCTTTTTGACCGCATGGCCGTGGAC
ATAGTTGGGATCTTTCGTAGGGTGCGCGGGTTTTGTAACGGAACATCTTG
CGTCACGAAGCGCAACTATCATGCAAGCAATAGCCGTTAGTTTAAAAAAA
AAATTGTATCCATTCAGTGCATCAACAAACTTAGACGTGTCTCACACGTA
AGTACCCCTTACATCCGTCCGTTCTCTCGAGGGCGAGTGGTCAGCGGTCT
GTAACAACAAGTATGGTATGCCAAACACGAGTACCCCCCCCCCCCCATTT
TTTTTTTTTTTCTAACTGTGCTGATAAATGTACACGAGTGAAGTTTGAGG
TTGGCTCTATAACCGCAACATGGGTACGATGGAGTTCATTATATGAGATT
TGAAAGAGCCACTATCTGACTGTGGCAAGTGGATGGGTTGACTCATGGGT
GCGACTCGGTGGGAGAAATTGTTGTTTTCATTTTGATGTCATCTATTCGG
TTGAACGTGTGTAAGCTGTATCATGTTCGTGTAAAGGTCACACACGCGTG
ATGACAGCACTACTCCCCTGTGTAGACCCCCCCCCCCCCTCCCATCCTAT
TGGTCATGATCTAATTTTGCTAATAAATGTAAACAACTGAAGTTTATAGT
CAGCTGCATAACCTCGACAAGGGTACAGTGCAGTTATTACATGAGCGTCA
AAGCTATAGTTTGATACCCCCCGTCCCTCCCAAACACACACCACGCCACA
TCATTCGCCTTCCGTTCCTTCCGTCTTCTCGCTCTGTGTTTTTTTTTCTC
AAGGTTGCGGCGACAATACGTTCATGCATGTGTTCTCCACCACCCTGTCG
TCGGTAGTGGAGGCGTTCCGCCCTGAAGCGGCGGTGCTGCTGTGTGGGGC
CGACACTCTGGCGGCCGATCCGCTGGGGCCGTTCAACCTTACTTCGGGAG
GAGTTCGGGCCTGCGTTGAACAGGTATAGTGCTGTATGTCAGTACAGCAG
AAAGGTACAGTACAGTACAGTGTCAGTAAAGTAGACAGGTACCCCGGTTT
CTCTCAAGCGGTTTACATGTAATACGTTTTTAGGCAAAACTGGATTTAAT
AAGGAAGCTCCAGTAGGCCTAGCACGCCATGTCTAATTCCTATGTATGAA
TTTATGTATATTACGTTACGGTTGGTAGGGCCGTATCGGGATTTTAAGGT
GGCGGCGGTGCCCCCTCCTACCCCCCCCCCCGGGTGGAGGGGGGGGTTGT
AAGAAGCAGGTTTTGTGTTGAGGGTGCGTATCACAGGAAGTGATTTTTTT
TTTTAACCTCCGGACGGCTGAGGCAAAAACCATTACCGATGCTTCCATAC
TTGAGTATTTTACCAAAATATGTCTACATTTCCTTCAACAGAACAGAGTT
ATTTATTCCTCTGCGGGGGTAGGCGCCACCCTGGTTTCGCCGAACCAAGT
AGGCAGTGTGGGGGGTTGCACCCACTAGAAGACCTCTGACTAGACTTCCT
AGAAAATCTCAGACTAGACTTCCAGTCATGCTCAGTTCACGAGCTACCCT
ACCCGTTCGGGCGTAGGTCCGTGGCACAGGAAGTGATGCTACTTCGTACG
TCGAACAGATTTGCCATGGTTTATTCCAAGGGCATCCCTGGCAAACGTTT
TTGCACACTCATTAGACGTGGCAATTTATGCCCCCCCCCAAATAACTTAA
GCGACCCACGCACAGCACACGACGTACACAAGGGTAGTGCGTGTTACACG
GGGTAAGGTTGCTAGCGCACTCCTAGCGGAGGATCATGGTATGTATTTTG
CCGATGGGGGTGGCTAGGGGGGGAGGCTACGATACGAATGGCGACCCTGT
ACTCGTCGATTGGACGAAATCTTGTTGTAGGCTAGTTTTGACACAGGGAA
ATTGAAGCCCACAGTGAGTCTTCATAGTTACGGCACTGAGGTGGGGGTGC
ACCTGTTACGGAAGGGGTCTCAATTTTTTTGTGAGTGAAGTGCTGACTGA
CTGTATGCTGCAGCGATTAATGTATCTTCCTTTTCGGGGTCAATGAACAT
TACAATTTGTTTTAGAAGGGCTGGTTAAATGATAAGTGAGATTTAGTACT
CCAATATCCATATAATCTCTCTGTAATTAGCCTTGCCTTCTATTTCTGTC
TGTCTCTTACTCTGTCTCTGTCTTTCTTTCTCAGGTGGTGGCTCTGGACA
TTCCGCTACTGCTGTTGGGAGGTGGAGGATATTGCCCCACGTGAGTAATA
AAAAAGACGTGAGGCAGCTTTTGCTCCTAACTAATGTGCGACCTTAGACA
AAGTCTGAATCACTTGTGAAAAATGAAGACTTGAACGTCTTACGGCATGA
GATGATGGGTTTATTTTATTTTTTACCTGATAGTAAATATGATGTCCACC
GACTTAACTCTACAGCTACAGCTACAGCTACAGCTACAGCTAGAGTATTG
CTGCCGACAAGTAGAGTATGACCATGACCATGGCCAAGCTAAGCTGTGCA
ACCCTTACGCCAGTATTTTGTTCTCGACCTGGCAACACAGCTCACTGCGC
TCGTAATCAACGTAGATATGTATAACATCCGGGATATAATATATATCTAA
AAGTTTTTGCTTGAGCGCAAAATTTTATATGTACCCCGAACCAACCGACC
ATTGGCTGTCGTACACCTTTTTCGCGTTTTTTGGCCAAAACAAACATGTT
TGTAAATTTCGATTTCATCGTGACCTGCATGTCCCGAACCCCCAGTACAT
CAGCACCTCCGTCTCGCTACGAAACGAATTCCTTTTCACAAACCCTCAGA
TTTTGTGAAAAAAAAAAACTCCTGAAAAATTGCGACTCTTGAAAAAAAAA
AAAAAAGTAAAAAAAAGTCGTTCTTGTATCGCGAAGTTGCTGCACATGGA
CCGGATTTGAAAACTGGAGTTCATTAGTAGCCATACAGGACAATCAAATC
GAAATTTACAAAGAGACGGTTGTTTTCGCAAACACTCTAATAATTAAAAC
GGCGTAATTTATTTGAAAAAAAAAAAAAAACAATTCGCGTGCAGGGATAC
CGCTCGGATGTGGACAACGCTGACAGCGGCCGCCGTAGGTCCCGAGGCCC
TTGCGGCGCTCCCCGTCTCCGTCCCGGATCACGCCTATTTTCCGCTGTAC
GGCCCGGATTTTCGCCTGGCGACCAAGCCGAAGACTCTGAAGGATAACAA
CGACTCAGCTTTTCTTGCAGAGTAAGTTTGGTATTTTTGGGTGGGGGGGG
TACGGAAGAGGGGGGCAGGGGCATTGGGAGTGTCCTGTGTACAGTCATCA
GCAGAATGAGATTGATAAGGGGGGGACACGGCCAGCGGGGTTTTGTTTCT
GCAATTTGTTTGTGTGCCTATGTTTTTCAGGGCTTCGTGCACCTGTTTTG
CAGGTAAAGGTGTTGCACGAACTGTCCGCAGTCGGCACTCATCGTTATTC
AGCCCAGGCGGTCGTTGAGAGGTTGGATTTTACCCGGTGGTTGCTGATTG
GTTGGCGAGGTTTCAGAGTGTTGTTGCCGCGGTTGGTTGGTTACAAGTAG
TTTTTTTTTTTTTTCTTCTAGTATGTGTCCGACGGGGGACTGTCAGGCTC
CGGTCACGAGATGTGTCGGTTCGGCTGGTCGGTCAGGCTAGTGCGCGCGT
GAGGGCTGCCGCTGGCGGATGCTGAGAAACCGTTCGCGGTTGAAACTTCC
AGACGTGCAGACTACATATTTTTAAATTCTGGCCGCTCTGAAGCAGAACT
GCCCCCCCCCCCCCCGGTATGAATTGTCCATGAACACATCGAATTAGCTG
ATTTTCCGTTGTCTGCTACCGTCCAGTCTACTTGGTGGTAGCGACATTGA
ACGTATCAGCGCCATGATAACCCTGGGTGGCCATGGACAGGCCAGACACA
CCAGTCACTTGGCTTTTACATAACCTGTCGATAGTTTTGCAAGTTTTTTC
CCGGCGGGGTGTCTGGTTGGCCCGGTCCGGTCAGACCTTGCCGGTCGGTA
ACGCTGGCCAGGTCAGCTAGCCACCGGATGGCGGTGAAAAGCCGAGGTGT
TTTCGAGCAGGTCAGTTAGCTCCCGGACACGTGAAAAGCCGAGGTGTTTT
TTCAGTTGGGTACTTGATTCGGTACATGGTATTCGGAGCTTGGGCGTGGC
TCAGCAAGTATTAAATATGTCATGTAGTGAGAAGTCGTGCTCGCGCGAAA
ATATTCTTGCATTCAATCCCTCCCCTCCTCCCCCTGCCCCGCTCCCATCT
CTTTCTCCATCACTAAGTGGCATCCTTCCCTCGTCCATCTTCCCGCCCGT
ACTTGTCTGTTGGTATTGTTGTTGTGCTGATTCCAGGCTTGGCGACTTCG
CTACCCAGGCCACACGTAGGGTTGCATCGTCTCTCGCTCGCGAGAATAGC
CTGGAGTTGACGCCGTGTCGGGCTTACGATGACGCGTGCACTGTCGATGG
AGATTCCTGGTAAAGAACGAGCTAAAGCAAGCAACAAGGTTACTTACTGC
TGCGACCGACACAAACCTGATTTCGATTCAGCCGGGCGAGTCAAAAATCA
ATTGGGGGACCACATTGAAGCAGGACCGGTTCGCGTCAATGGAAAGTCCC
GTATAGAGCGAACCAACATCGGACGGAAAATTTCGCGTGACCGGATCTCG
CTCGCACCGATTCGAAGCTAGTCAAAGTGTATCATTGGGTTAGAGCTGGC
ACCGGCCAGAGGTTGTCACATGTGACCAGGCTATACAAATTGGTCCGAAA
TAGTGAAAGGAGGTATCAGGTGTCCAAAGCGGCCAGATCCGGGTCTGAAC
GTGGTTGTGTGTTAAAAAGCTGGAATTCCGGTAGTCTGTGAACAGCGGTG
GTATGTAGCGAGCAGAATCCGGGAGGTGGAGTAGTATACGCGGCACATTT
AGGTAATTAGTTTTAGTGTACGTATGCGTACATGGCAAGATATATACCGT
TGTGGTTGTTCGGTAGATTAAAAAAACATGGAAACATGGCGATGTTATGT
GTCATGTGCACCCGATTTTGAAGGATATCGAGATCCCGTATGTTGAACGC
ACGAATAGTATGTCGTATTTTGAGTACACGAGAGAATCTCATATGTTGCA
AACCACGGAAGGATTATGAGCCACGATGGAGGTTTTGAGAACGCGCGTTG
AGTGCCGATAGGGAGTTTGCGCGGTTGTAGTTATTTCTTTTTGTGTTTTG
TGTTGTGTGTTATGTGTTATTGTGTTTATTATTTGTGTGACCGTGTTTTG
TGCTGCTCGCTGAATGTAGTACAAGAAGCCAGTTAGCCAGCTGGGCACGT
TTTTTTTGTTGGTACTCTTTGACGCTTTCACAACCATGTTAGCCATTGTT
GTGAACGAAGCACGAAGTATTCGACTGACCGACCACCACACGTGGGGCGT
GCCCATGTGTTTTGTGATTCTGTTGAACAAAACAATGTGTGCATTTTGTT
TGGTGTGATGACGTCCTTCTTGTATCGGGTCTTTCTTTATCGGCTGTGCG
TTGTTGCCATTGCTTCGGAGGAAAAAAGCATGAGTTCCCTCGTACAAGAC
TGCAGGGTTTGAGGGCATGATCATCGCGAGTGACAAGGTTACCCTTGTGC
ACATTCGACTTTACATAAAAAAACTGCGTCAATCGCAATTCAGAACAAGT
ACTCCGTTGGGTATATATATATATATATATTTATTCACGTATCTATTGCC
GAGATTTATCACCAGATAGACGGTCATGTTTTTTTCAGTGCAGGATAGTG
CAGTGTCTCGTTTTCTCGAGAAATATCGAGGTTTTACAGCAAAAAGTTTC
AAGCTTTCTATCCCCGGCGGGAATGTTATGTTTGTAAGCTACATAGGGTC
GGTTATCGTTGTCGTTGCTGGTCTTCGTGTTGCGGTCATTTTATTGTATC
TCTGTTCTCGGGTTTCGGATGTGGAGAATCCTGCACAAAGCGTGTGCGTC
TCGATCTCAACAGCATTGCGTAATGTACCTTTTCGCTCGTTTCGTGTTTC
TTGTGGCGTGTTTCATGTTTGGTTAAAAGCAAGCTCCTGTTAGTCGACGG
AAGAGGATGGAAGTGTGGTGGGTGGGCTGGTTTATGGAATGGAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig110:33360..45153+ >mRNA_H-paniculata_contig110.650.1 ID=mRNA_H-paniculata_contig110.650.1|Name=mRNA_H-paniculata_contig110.650.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1068bp|location=Sequence derived from alignment at H-paniculata_contig110:33360..45153+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGATGGGTTGCGGCGACAATACGTTCATGCATGTGTTCTCCACCACCC
TGTCGTCGGTAGTGGAGGCGTTCCGCCCTGAAGCGGCGGTGCTGCTGTGT
GGGGCCGACACTCTGGCGGCCGATCCGCTGGGGCCGTTCAACCTTACTTC
GGGAGGAGTTCGGGCCTGCGTTGAACAGGTTGCGGCGACAATACGTTCAT
GCATGTGTTCTCCACCACCCTGTCGTCGGTAGTGGAGGCGTTCCGCCCTG
AAGCGGCGGTGCTGCTGTGTGGGGCCGACACTCTGGCGGCCGATCCGCTG
GGGCCGTTCAACCTTACTTCGGGAGGAGTTCGGGCCTGCGTTGAACAGGT
GGTGGCTCTGGACATTCCGCTACTGCTGTTGGGAGGTGGAGGATATTGCC
CCACGTGGTGGCTCTGGACATTCCGCTACTGCTGTTGGGAGGTGGAGGAT
ATTGCCCCACGGATACCGCTCGGATGTGGACAACGCTGACAGCGGCCGCC
GTAGGTCCCGAGGCCCTTGCGGCGCTCCCCGTCTCCGTCCCGGATCACGC
CTATTTTCCGCTGTACGGCCCGGATTTTCGCCTGGCGACCAAGCCGAAGA
CTCTGAAGGATAACAACGACTCAGCTTTTCTTGCAGAGGATACCGCTCGG
ATGTGGACAACGCTGACAGCGGCCGCCGTAGGTCCCGAGGCCCTTGCGGC
GCTCCCCGTCTCCGTCCCGGATCACGCCTATTTTCCGCTGTACGGCCCGG
ATTTTCGCCTGGCGACCAAGCCGAAGACTCTGAAGGATAACAACGACTCA
GCTTTTCTTGCAGAGCTTGGCGACTTCGCTACCCAGGCCACACGTAGGGT
TGCATCGTCTCTCGCTCGCGAGAATAGCCTGGAGTTGACGCCGTGTCGGG
CTTACGATGACGCGTGCACTGTCGATGGAGATTCCTGGTAAGCTTGGCGA
CTTCGCTACCCAGGCCACACGTAGGGTTGCATCGTCTCTCGCTCGCGAGA
ATAGCCTGGAGTTGACGCCGTGTCGGGCTTACGATGACGCGTGCACTGTC
GATGGAGATTCCTGGTAA back to top
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