prot_H-paniculata_contig24.6493.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig24.6493.1
Unique Nameprot_H-paniculata_contig24.6493.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length334
Homology
BLAST of mRNA_H-paniculata_contig24.6493.1 vs. uniprot
Match: D8LG94_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG94_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 2.630e-20
Identity = 59/138 (42.75%), Postives = 77/138 (55.80%), Query Frame = 0
Query:   91 KQALNDQEWPTLGKIVKRDPSTLDPKAN--LAAIHAALLDAKQGQLPRAAEATKSG----------GREN---NTGRMYVGDRVEARFEGGFEWFPATITKMLHGGLVNLAYDDGGKENRVHSSLLRRPGLGAEQMSD 213
            K  L+ QEWPTLG+  + +           LAA+HA +L A +     ++ +   G          GRE+   N+GR+ VGDRVE RFE G EWFPA +TK+LHGG VNL YDDG +E RV  +L+R  G  A    D
Sbjct:   86 KHQLDAQEWPTLGETPQHEAQEXXXXXXXXLAALHAEMLKAARSHAGGSSSSDNKGMAGKAMAAGDGRESARRNSGRIGVGDRVEGRFEAGAEWFPAVVTKLLHGGFVNLLYDDGERETRVPLALVRHRGATAAMTMD 223          
BLAST of mRNA_H-paniculata_contig24.6493.1 vs. uniprot
Match: A0A835YPI3_9STRA (Tudor domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPI3_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.560e-10
Identity = 28/48 (58.33%), Postives = 40/48 (83.33%), Query Frame = 0
Query:  155 VGDRVEARFEGGFEWFPATITKMLHGGLVNLAYDDGGKENRVHSSLLR 202
            VG RVEAR++ G EW+P T+TK++ GGL+++AYDDG +E RVH+S +R
Sbjct:   42 VGMRVEARYKQGEEWYPGTVTKLVSGGLMSIAYDDGERETRVHASCVR 89          
BLAST of mRNA_H-paniculata_contig24.6493.1 vs. uniprot
Match: A0A2R5GDF6_9STRA (Cytidine deaminase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GDF6_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 6.260e-6
Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 0
Query:  151 GRMYVGDRVEARFEGGFEWFPATITKMLHGGLVNLAYDDGGKENRVHSSLLRR-----PGLGAEQMSD 213
            G +  GDRVEAR++GGF+W+   I+++   G  N+ YDDG +E R+  S +R+     PG G    SD
Sbjct: 1800 GALREGDRVEARYKGGFKWYKGRISRVNADGSYNIDYDDGDQERRIAPSKVRKLEGNKPGRGGRPSSD 1867          
BLAST of mRNA_H-paniculata_contig24.6493.1 vs. uniprot
Match: A0A7S2SVE7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVE7_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.200e-5
Identity = 35/85 (41.18%), Postives = 46/85 (54.12%), Query Frame = 0
Query:  126 LLDAKQGQLP-----RAAEATKSGGRENNTGRMYVGDRVEARFEGGFEWFPATITKMLHGGLVNLAYDDGGKENRVHSSLLRRPG 205
            LLDA  G L      +AA    +      T  +  GDRVEAR++GG ++F   I K+ H GL N+ YDDG  E +V   L+RR G
Sbjct:  176 LLDAYAGSLEPPVAQKAASLRDAALASPATHGVKEGDRVEARWDGGPDFFSGVILKVHHEGLFNIQYDDGEMETKVPPHLIRRRG 260          
BLAST of mRNA_H-paniculata_contig24.6493.1 vs. uniprot
Match: A0A5D6YD53_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YD53_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.450e-5
Identity = 25/48 (52.08%), Postives = 32/48 (66.67%), Query Frame = 0
Query:  155 VGDRVEARFEGGFEWFPATITKMLHGGLVNLAYDDGGKENRVHSSLLR 202
            VG RV A+F+GG EWFPAT+ ++  G   NL YDDG  E RV   L++
Sbjct:  129 VGQRVLAQFQGGAEWFPATVIEVRRGNEYNLRYDDGEDEFRVSHKLMK 176          
BLAST of mRNA_H-paniculata_contig24.6493.1 vs. uniprot
Match: T0QSS3_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QSS3_SAPDV)

HSP 1 Score: 55.5 bits (132), Expect = 5.110e-5
Identity = 30/81 (37.04%), Postives = 43/81 (53.09%), Query Frame = 0
Query:  122 IHAALLDAKQGQLPRAAEATKSGGRENNTGRMYVGDRVEARFEGGFEWFPATITKMLHGGLVNLAYDDGGKENRVHSSLLR 202
            + A L+  K G  P+         +  NT    VG +VEA+++G  E+F  TITK    G  ++ YDDG KE +V S L+R
Sbjct:  214 VAAELIRKKGGTSPKKKSNDSDDDKPKNTASYRVGAKVEAQYKGKKEYFKGTITKDYGDGRYDIEYDDGDKEFKVSSGLMR 294          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig24.6493.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LG94_ECTSI2.630e-2042.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YPI3_9STRA1.560e-1058.33Tudor domain-containing protein n=1 Tax=Tribonema ... [more]
A0A2R5GDF6_9STRA6.260e-641.18Cytidine deaminase n=1 Tax=Hondaea fermentalgiana ... [more]
A0A7S2SVE7_9STRA1.200e-541.18Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A5D6YD53_9STRA1.450e-552.08Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
T0QSS3_SAPDV5.110e-537.04Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 145..208
e-value: 2.0E-9
score: 39.0
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..333
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.774
NoneNo IPR availableTMHMMTMhelixcoord: 2..19
IPR008395Agenet-like domainPFAMPF05641Agenetcoord: 156..202
e-value: 9.0E-6
score: 26.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig24contigH-paniculata_contig24:44250..52271 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig24.6493.1mRNA_H-paniculata_contig24.6493.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig24 43480..52633 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig24.6493.1 ID=prot_H-paniculata_contig24.6493.1|Name=mRNA_H-paniculata_contig24.6493.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=334bp
MWGAFIVLCGIGIFIWLIVCNTSSLETSEDDKNDRGRVEDLLQNGGGKRR
ARRKGGKKGSKQNTVSNNNSAVAVVQPAERSIRKQERDSRKQALNDQEWP
TLGKIVKRDPSTLDPKANLAAIHAALLDAKQGQLPRAAEATKSGGRENNT
GRMYVGDRVEARFEGGFEWFPATITKMLHGGLVNLAYDDGGKENRVHSSL
LRRPGLGAEQMSDEGEEETGSKPEDFAAGSKSESEESTTRTTGSTGRGEY
KLEKSAQETEEEGKGSRREGSTSKKALIPKKFFKKEGDQYFPSFASLATQ
TLSPFDQGVLSIQKSERTTSTFRCLNSSSPGRI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008395Agenet-like_dom