prot_H-paniculata_contig23992.6491.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23992.6491.1
Unique Nameprot_H-paniculata_contig23992.6491.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length57
Homology
BLAST of mRNA_H-paniculata_contig23992.6491.1 vs. uniprot
Match: A0A6H5KMN6_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN6_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 8.300e-9
Identity = 24/52 (46.15%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    4 TKEEEAKAYTMITSFCNLVHRNCPGSVAVVERDNDGRFKRVFFMLGAVAHVA 55
            +KE+    Y ++TS+C  + ++CPGS+AVV+R+  GRF+ +FFMLG  A+ A
Sbjct:  135 SKEQLEHGYRIMTSYCKELVKDCPGSIAVVQRETTGRFRSLFFMLGRAAYAA 186          
BLAST of mRNA_H-paniculata_contig23992.6491.1 vs. uniprot
Match: A0A6H5LCT1_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCT1_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 1.020e-8
Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    4 TKEEEAKAYTMITSFCNLVHRNCPGSVAVVERDNDGRFKRVFFMLGAVAHVA 55
            +KE+    Y ++ S+C  + ++CPGSVAVVER+  GRF+ VF MLG  AH A
Sbjct:  135 SKEQLEHGYRIMDSYCKELVKDCPGSVAVVERETTGRFRSVFVMLGRAAHAA 186          
BLAST of mRNA_H-paniculata_contig23992.6491.1 vs. uniprot
Match: A0A6H5JW23_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW23_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 1.190e-8
Identity = 25/52 (48.08%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    4 TKEEEAKAYTMITSFCNLVHRNCPGSVAVVERDNDGRFKRVFFMLGAVAHVA 55
            +KE+    Y ++ S+C  + ++CPGSVAVVER+  GRF+ +F MLG  AH A
Sbjct:  115 SKEQLEHGYRIMDSYCRELVKDCPGSVAVVERETTGRFRSIFVMLGRAAHAA 166          
BLAST of mRNA_H-paniculata_contig23992.6491.1 vs. uniprot
Match: A0A6H5L490_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L490_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 6.050e-7
Identity = 24/52 (46.15%), Postives = 34/52 (65.38%), Query Frame = 0
Query:    4 TKEEEAKAYTMITSFCNLVHRNCPGSVAVVERDNDGRFKRVFFMLGAVAHVA 55
            + E+    Y ++ S+C  + ++CPGSVAVVER+  GRF+ VF ML   AH A
Sbjct:  138 SNEQLEHGYRIMDSYCKELVKDCPGSVAVVERETTGRFRSVFVMLRRAAHAA 189          
BLAST of mRNA_H-paniculata_contig23992.6491.1 vs. uniprot
Match: A0A6H5JUM0_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUM0_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 3.920e-6
Identity = 23/52 (44.23%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    4 TKEEEAKAYTMITSFCNLVHRNCPGSVAVVERDNDGRFKRVFFMLGAVAHVA 55
            +KE+    Y ++ S+C  + ++CPG VAVV+R+  GRF  VF MLG  A  A
Sbjct:  177 SKEQLEHGYRIMDSYCKELVKDCPGPVAVVQRETTGRFPSVFVMLGRAARAA 228          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23992.6491.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KMN6_9PHAE8.300e-946.15MULE domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A6H5LCT1_9PHAE1.020e-850.00MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JW23_9PHAE1.190e-848.08MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L490_9PHAE6.050e-746.15MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JUM0_9PHAE3.920e-644.23MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23992contigH-paniculata_contig23992:1919..2889 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23992.6491.1mRNA_H-paniculata_contig23992.6491.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23992 1893..2889 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23992.6491.1 ID=prot_H-paniculata_contig23992.6491.1|Name=mRNA_H-paniculata_contig23992.6491.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=57bp
MQQTKEEEAKAYTMITSFCNLVHRNCPGSVAVVERDNDGRFKRVFFMLGA
VAHVAAN
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