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Homology
BLAST of mRNA_H-paniculata_contig2398.6487.1 vs. uniprot
Match: D8LGP7_ECTSI (Cyclin D3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP7_ECTSI) HSP 1 Score: 298 bits (763), Expect = 4.230e-83 Identity = 189/383 (49.35%), Postives = 232/383 (60.57%), Query Frame = 1
Query: 526 EEKLEVLGNMLRAQAKFHPRTTATEAGAGGERRERAMCHEVSPFVAERRRWFVAWKNQMASFLGYSRDTVAVALNYFDRYTCARPCSPTLAQAAAATALHVAAKFEESNPASLRQLLKFTPVFTPDQLMVIEMSMLKVLNWDLRPVTIYDFVRSFCDLMSTRTGSTPKTR---------------QGRGDEKE----LRIGAEEIADLCASEVSLLEFYPSTLAMSAVLL---------------SASRPEAVTSHADVLDAC-------------VTAVGVSN----NLISLERILDCIRLVGASLAKRLPAAGAAADIAAEQVIRYAALDV-EAEVDVARDLAAVETTMSSGRGSGSPVPPAKKRRCSTPTSVDGIVHIEM 1518
EE+ + L M++AQ KF P AG G RA CH VSPFV ERR FVAW+NQMA+FLGY+RDTVAVALNYFDRYTC + CSPTLAQA AATALH+AAKFEE+NPASLRQLLK+TPVFTP+QL+V+EMS+LKVLNWDLRPVT+YDFVR+FC L+ S+ Q R ++KE LR+ AE+IADL + +V ++F PSTLA +A+ ++ RP TSHADVLDAC A V + SL R+L+C++L+G+SLA+R PA +AA AAE V RYA L V V V K RRC+TPT V+GI+HIEM
Sbjct: 28 EERKDGLLKMIQAQHKFLP------AGVNGRAGARARCHVVSPFVGERRGQFVAWENQMATFLGYNRDTVAVALNYFDRYTCEKRCSPTLAQAVAATALHIAAKFEETNPASLRQLLKYTPVFTPEQLLVMEMSLLKVLNWDLRPVTVYDFVRAFCALLVQGEASSHAAXXXXXXXXXXXXXXXXQAREEKKEELKRLRVWAEDIADLASFDVRFVDFLPSTLATAALXXXXXXXXXXXXXXXXXASVRP---TSHADVLDACWKGPAEADAASDGAAAAAVDGCGGTGVASLRRVLECVQLLGSSLAERYPAVASAARSAAEGVARYAGLPVPRGTSSVPPRXXXXXXXXXXXXXXXXXVVAVKGRRCTTPTGVEGIMHIEM 401
BLAST of mRNA_H-paniculata_contig2398.6487.1 vs. uniprot
Match: A0A6H5L1G7_9PHAE (CYCLIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G7_9PHAE) HSP 1 Score: 249 bits (636), Expect = 7.060e-66 Identity = 210/585 (35.90%), Postives = 268/585 (45.81%), Query Frame = 1
Query: 526 EEKLEVLGNMLRAQAKFHPRTTATEAGAGGERRERAMCHEVSPFVAERRRWFVAWKNQMASFLGYSRDTVAVALNYFDRYTCARPCSPTLAQAAAATALHVAAKFEESNPASLRQLLKFTPVFTPDQLMVIEMSMLKVLNWDLRPVTIYDFVRSFCDLMSTRTGSTPKTR---------------QGRGDEKE----LRIGAEEIADLCASEVSLLEFYPSTLAMSAVLLSASRPEAV------------TSHADVLDAC----VTAVGVSNN----------LISLERILDCIRLVGASLAKRLPAAGAAADIAAEQVIRYAALDVEAEVDVARDLAAVETTMSSGRGSGSPVPPAKKRRCSTPTSVDGIVHIEMAGMLDATAA-------------SGDNDGAGAIGVGSNASLACSRSSAVMTXXXXXXXXXXXNVAVAAREKGSRRSANPHRPTPYAAPSAHGVMASTAAAL--------------GARAFSFSDDEVILAQGAK--RGVVSSVFIAAPENTPWQPQQLSSRRLPS------------SSSSVCSMGSRKRSAEALGHCESGSGFGAPMPR 2022
EE+ + L M++AQ KF P AG G RA CH VSPFV +RR FVAW+NQMA+FLGY+RDTVAVALNYFDRYTC + CSPTLAQA AATALH AAKFEE+ PASL VLNWDLRPVT+YDFVR+FC L+ GS+ Q R ++KE L + AE+IADL + +V + F PSTLA +A+ TSHA+VLD C A S+ + SL R+L+C+ L+G+SLA+R PA +AA AAE V RYA V + + + + PV K RRC+TPT V+GIVHIEM + A G DGA LA + +V +++ RPTP +A S A + +F++S D+V ++ K R ++ R + + SS+ S RKRSAEALGHCESGSGFGAP R
Sbjct: 124 EERKDGLLKMIQAQHKFLP------AGVNGRAGARARCHVVSPFVGKRRGQFVAWENQMATFLGYNRDTVAVALNYFDRYTCEKRCSPTLAQAVAATALHTAAKFEETKPASL------------------------VLNWDLRPVTVYDFVRAFCALLVQGEGSSHAAAASTSGVGGASVSVSLQAREEKKEELERLGVWAEDIADLASFDVRFVNFLPSTLATAALXXXXXXXXXXXXXXXXXXXVPPTSHAEVLDVCWKGPAEADAASDGAAIDGCGGTGVASLRRVLECVLLLGSSLAERYPAVASAARSAAEGVARYAGFPVPSGTSNVPPRREPAGRKRAAQAATPPVVAVKGRRCATPTGVEGIVHIEMDTLRGGEAGLQQQQHQPSEHKPRGSGDGA----------LAXXXXXXXXSSAPVGGEGLGPGGSVHVKQEHQLPQGRHRRPTPIITAAAGAANNSAAGQPQHQDHTPACAEMRGSSSSFAYSGDDVAFSRATKHTRAAATAXXXXXXXXXXXXXXXXXXPRATAVDAGSDMNGAVAAGSSLMSCNIRKRSAEALGHCESGSGFGAPATR 668
BLAST of mRNA_H-paniculata_contig2398.6487.1 vs. uniprot
Match: A0A2R5GFP5_9STRA (G1/S-specific cyclin-D2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GFP5_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 2.740e-7 Identity = 53/194 (27.32%), Postives = 89/194 (45.88%), Query Frame = 1
Query: 682 VAWKNQMASFL-------GYSRDTVAVALNYFDRYTCARPCSPTLAQAAAATALHVAAKFEESNPASLRQLLKFTP-VFTPDQLMVIEMSMLKVLNWDLRPVTIYDFVRSFCDLMSTRTGSTPKTRQGRGDEKELRIGAEEIADLCASEVSLLEFYPSTLAMSAVLLSASRPEAVTSHADVLDACVTAVGVSNN 1239
V W++++AS+L G S++T+AVA+NY DRY ++ Q A ++ VA K E+ P + +L + + ++E+ +L+V+ W L PVT F+ + P+TR+ +E A D+ E L F PS + +AVL + S A A V+ G+ N+
Sbjct: 126 VIWRSKVASWLLEFEEEYGISQETIAVAVNYMDRYLSEISTKRSILQLLAMGSIFVATKLHETFPIGMHELRDLADGTYLESDIKLMELELLRVIQWKLTPVTPQSFMAHIIQFIPC-----PETRRVLHEE------AVTFLDVVIPEYEFLHFTPSVIGTAAVLCAFSTTNVHDDMARAWAASVSCFGLLNS 308
BLAST of mRNA_H-paniculata_contig2398.6487.1 vs. uniprot
Match: UPI001924A876 (cyclin-D1-1-like isoform X2 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=UPI001924A876) HSP 1 Score: 65.5 bits (158), Expect = 3.370e-7 Identity = 57/181 (31.49%), Postives = 90/181 (49.72%), Query Frame = 1
Query: 637 CHEVSPFVAERRRWFVAWKNQMASFLGYSRDTVAVALNYFDRYTCARPCSPTLA---QAAAATALHVAAKFEESNPASLRQLLKFTP--VFTPDQLMVIEMSMLKVLNWDLRPVTIYDFVRSFCDLMSTRTGSTPKTRQGRGDEKELRIGAEEIADLCASE---VSLLEFYPSTLAMSAVL 1155
C E S V R+ + W ++ + +S T +++NYFDR+ +R P Q + L +AAK EE SL +L F P +F P + +E+ ++ VLNW LR VT +D++R F +++ + P D L + A +DL S + L+F PST+A +AVL
Sbjct: 86 CQERSVDVIARQD-SINWILKVNACYHFSPVTAFLSVNYFDRFLSSRDLPPANGWPLQLLSVACLSLAAKMEEPQVPSLLELQTFHPRFIFEPKTIQRMELHVMAVLNWRLRSVTPFDYLRYFISKLTSCSTRLP-------DSFSLIVSAA--SDLILSTMRVIDFLQFAPSTVAAAAVL 256
BLAST of mRNA_H-paniculata_contig2398.6487.1 vs. uniprot
Match: F0Y9F7_AURAN (CYCLIN domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9F7_AURAN) HSP 1 Score: 66.2 bits (160), Expect = 6.080e-7 Identity = 61/209 (29.19%), Postives = 93/209 (44.50%), Query Frame = 1
Query: 532 KLEVLGNMLRAQAKFHPRTTATEAGAGGERRERAMCHEVSPFVAERRRWFVAWKNQMASFLGYSRDTVAVALNYFDRYTCARPCSPTLAQAAAATALHVAAKFEESNPASLRQLLKFTP-VFTPDQLMVIEMSMLKVLNWDLRPVTIYDFVRSFCDLMSTRTGSTPKTRQGRGDEKELRIGAEEIADLCASEVSLLEFYPSTLAMSAVL 1155
+L +G A A P A+ +G GG + H WF QM + TV +A N+ DR T R C Q A TAL +AAK EE P +L L+ + +F D + ++E+ +L+ L W L T++ FV DL+ R + GR ++ +R A+ DL L F +TLA+++V+
Sbjct: 23 RLRRMGEAEAAYAPGGPSPAASCSGCGGPSTRAKITH-----------WFC----QMGESFDLAGHTVGLAANFLDRCTARRDCGAAQYQLIAVTALLLAAKVEERKPITLNDLVVLSSGLFERDDIRLMELELLRALEWRLNAPTVHAFV----DLL-LRLVDDGREAPGRLADR-VRAEAKAFVDLSVVHDELRGFAAATLAVASVM 210
BLAST of mRNA_H-paniculata_contig2398.6487.1 vs. uniprot
Match: A0A0P7Z840_SCLFO (G1/S-specific cyclin-E2-like n=4 Tax=Scleropages formosus TaxID=113540 RepID=A0A0P7Z840_SCLFO) HSP 1 Score: 62.0 bits (149), Expect = 5.700e-6 Identity = 42/157 (26.75%), Postives = 79/157 (50.32%), Query Frame = 1
Query: 688 WKNQMASFLGYSRDTVAVALNYFDRYTCARPC-SPTLAQAAAATALHVAAKFEESNPASLRQLLKFTP-VFTPDQLMVIEMSMLKVLNWDLRPVTIYDFVRSFCDLMSTRTGSTPKTRQGRGDEKELRIGAEEIADLCASEVSLLEFYPSTLAMSAV 1152
W +++ + R+T +A +YFDR+ + C Q TAL +A+K EE P L+ T D++ ++E+ MLK LNW++RP T+ +++ + + S + P + +K I ++ DLC +++ L++ LA +A+
Sbjct: 110 WLLEVSEEFSFHRETFYLAQDYFDRFMMTQDCVDKNCLQLIGITALFIASKVEEIYPPKLQDFAYLTDGSCLVDEIKLMELIMLKALNWEIRPETVISWLKLYIQVASLK--DDPNILVPQFSQKTY-IQIAQLLDLCILDINSLDYQYGVLAAAAL 263
BLAST of mRNA_H-paniculata_contig2398.6487.1 vs. uniprot
Match: A0A7K9NQN5_9CORV (CCNE1 protein (Fragment) n=1 Tax=Edolisoma coerulescens TaxID=2585810 RepID=A0A7K9NQN5_9CORV) HSP 1 Score: 62.0 bits (149), Expect = 6.250e-6 Identity = 46/162 (28.40%), Postives = 77/162 (47.53%), Query Frame = 1
Query: 688 WKNQMASFLGYSRDTVAVALNYFDRYTCARPC-SPTLAQAAAATALHVAAKFEESNPASLRQLLKFTP-VFTPDQLMVIEMSMLKVLNWDLRPVTIYDFVRSFC------DLMSTRTGSTPKTRQGRGDEKELRIGAEEIADLCASEVSLLEFYPSTLAMSA 1149
W ++ R+T +AL++FDR+ + + TL Q T+L +AAK EE P L QL T T D+++ +E+ ++K LNW L P+T+ ++ + DL P+ ++ + E+ DLC ++ LE+ LA SA
Sbjct: 128 WLMEVCEIYKLHRETFYLALDFFDRFMATQEDDAKTLLQLIGVTSLFIAAKIEEVYPPKLHQLACVTDGACTEDEIISMELIIMKALNWKLNPLTVVSWLNIYLQVAYLNDLCEVMLPQYPQ---------QIFVQIMELLDLCVLDIGCLEYTYRMLAASA 280
BLAST of mRNA_H-paniculata_contig2398.6487.1 vs. uniprot
Match: A0A821HQI3_9NEOB ((mimic poison frog) hypothetical protein n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A821HQI3_9NEOB) HSP 1 Score: 61.6 bits (148), Expect = 9.180e-6 Identity = 46/162 (28.40%), Postives = 81/162 (50.00%), Query Frame = 1
Query: 688 WKNQMASFLGYSRDTVAVALNYFDRYTCA-RPCSPTLAQAAAATALHVAAKFEESNPASLRQLLKFTP-VFTPDQLMVIEMSMLKVLNWDLRPVTIYDFVRSFCDLMSTRTGSTPKTRQGRGDEKELRIGAEEIADLCASEVSLLEFYPSTLAMSAVLLSAS 1167
W +++ R+T +A ++FDR+ A + S ++ Q T L +A+K EE P L + T + D ++ +E+ +LK L W+L PVTI ++ F + S + +PK + ++E I ++ DLC + L+F LA +A+ S S
Sbjct: 147 WLIEVSEVYSLHRETFYLAQDFFDRFMLAEKAVSKSMLQLIGVTTLFIASKLEEIYPPKLHEFAYVTDGACSEDDIIEMELIILKALKWELSPVTIIAWLNLFLQVSSLK--ESPKLLLPQYSQEEF-IQIAQLLDLCILHIGSLDFQYRILAAAALYHSTS 305
BLAST of mRNA_H-paniculata_contig2398.6487.1 vs. uniprot
Match: A0A7S3PMV0_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PMV0_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 1.130e-5 Identity = 46/163 (28.22%), Postives = 74/163 (45.40%), Query Frame = 1
Query: 670 RRWFVAWKNQMASFLGYSRDTVAVALNYFDRYTCARPCSPTLAQAAAATALHVAAKFEESNPASLRQLLKFTP-VFTPDQLMVIEMSMLKVLNWDLRPVTIYDFVRSFCDLMSTRTGSTPKTRQGRGDEKELRIGAEEIADLCASEVSLLEFYPSTLAMSAVL 1155
RR W + S+DTVAVA+NY DRY ++ Q A A+ +AAK E+ P + +L ++ + ++E+ +L+V+ W L PVT + + + P+ R K LR AE D+ E + + PS +SA+L
Sbjct: 68 RRKVTCWLLEFQEEFRISQDTVAVAVNYMDRYLSQISTKKSILQLLAMGAVFIAAKLHETYPIGMSELQTLAEGMYLESDIKLMELELLRVIQWQLNPVTPQTVMNHMVCYVDS-----PEKR------KLLREHAEAFLDVALCEYEFIGYLPSVQGVSAIL 219
BLAST of mRNA_H-paniculata_contig2398.6487.1 vs. uniprot
Match: UPI0010A02A6A (G2/mitotic-specific cyclin-B3 n=1 Tax=Grammomys surdaster TaxID=491861 RepID=UPI0010A02A6A) HSP 1 Score: 62.0 bits (149), Expect = 1.500e-5 Identity = 47/169 (27.81%), Postives = 80/169 (47.34%), Query Frame = 1
Query: 658 VAERRRWFVAWKNQMASFLGYSRDTVAVALNYFDRYTCARPCSPTLAQAAAATALHVAAKFEESNPASLRQLLKFTP-VFTPDQLMVIEMSMLKVLNWDLRPVTIYDFVRSFCDLMSTRTGSTPKTRQGRGDEKELRIGAEEIADLCASEVSLLEFYPSTLAMSAVLLS 1161
++ R V W ++ + S +T+ +A+ DRY C Q +TA +AAKFEES P SL++ L V+ ++ +E S+LK LN+D+ T Y+F+R + + R K L + + I ++ E +E PS LA ++ +L+
Sbjct: 1150 TSDMRAILVDWLVEIQTSFQMSHETLYLAVKLIDRYLMKAQCKKNHLQLLGSTAYMIAAKFEESYPPSLKEFLYICEDVYQKSDMVSLERSILKTLNFDINIPTAYNFLRRYASCI-------------RASMKTLTL-SRFICEMTLQEYDYIEERPSKLAAASFILA 1304
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 296.2 |
| Seed ortholog evalue | 3.7e-77 |
| Seed eggNOG ortholog | 2880.D8LGP7 |
| Preferred name | CCNE1 |
| KEGG ko | ko:K06626,ko:K21777 |
| KEGG Pathway | ko04110,ko04114,ko04115,ko04151,ko04218,ko04391,ko04934,ko05161,ko05162,ko05165,ko05200,ko05203,ko05206,ko05215,ko05222,ko05226,map04110,map04114,map04115,map04151,map04218,map04391,map04934,map05161,map05162,map05165,map05200,map05203,map05206,map05215,map05222,map05226 |
| KEGG Module | M00692 |
| Hectar predicted targeting category | mitochondrion |
| GOs | GO:0000003,GO:0000079,GO:0000082,GO:0000083,GO:0000122,GO:0000278,GO:0000280,GO:0000307,GO:0000723,GO:0000785,GO:0001541,GO:0001547,GO:0001654,GO:0001708,GO:0001709,GO:0001745,GO:0001889,GO:0001932,GO:0002009,GO:0002064,GO:0002065,GO:0002066,GO:0002165,GO:0003006,GO:0003674,GO:0003712,GO:0003713,GO:0003824,GO:0004672,GO:0004674,GO:0004693,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006277,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007049,GO:0007050,GO:0007059,GO:0007088,GO:0007096,GO:0007127,GO:0007129,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0007275,GO:0007276,GO:0007277,GO:0007281,GO:0007292,GO:0007304,GO:0007306,GO:0007307,GO:0007346,GO:0007399,GO:0007400,GO:0007422,GO:0007423,GO:0007444,GO:0007472,GO:0007476,GO:0007548,GO:0007552,GO:0007560,GO:0007584,GO:0008134,GO:0008150,GO:0008152,GO:0008283,GO:0008284,GO:0008356,GO:0008406,GO:0008585,GO:0009058,GO:0009059,GO:0009605,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009755,GO:0009790,GO:0009791,GO:0009792,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010927,GO:0010941,GO:0010942,GO:0014016,GO:0014017,GO:0014070,GO:0014074,GO:0015630,GO:0016043,GO:0016055,GO:0016301,GO:0016310,GO:0016538,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019207,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019827,GO:0019887,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022602,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030154,GO:0030182,GO:0030234,GO:0030518,GO:0030521,GO:0030522,GO:0030703,GO:0030707,GO:0030855,GO:0031099,GO:0031100,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031960,GO:0031974,GO:0031981,GO:0032200,GO:0032268,GO:0032269,GO:0032355,GO:0032501,GO:0032502,GO:0032504,GO:0032570,GO:0032870,GO:0032879,GO:0032880,GO:0032989,GO:0032991,GO:0033043,GO:0033197,GO:0033273,GO:0033993,GO:0034097,GO:0034641,GO:0034645,GO:0034654,GO:0035019,GO:0035107,GO:0035112,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035257,GO:0035258,GO:0035262,GO:0035295,GO:0035736,GO:0036211,GO:0040007,GO:0040026,GO:0040028,GO:0040035,GO:0042023,GO:0042127,GO:0042221,GO:0042325,GO:0042493,GO:0042592,GO:0042698,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043401,GO:0043412,GO:0043549,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044719,GO:0044770,GO:0044772,GO:0044786,GO:0044843,GO:0044877,GO:0045035,GO:0045132,GO:0045137,GO:0045143,GO:0045165,GO:0045471,GO:0045595,GO:0045597,GO:0045786,GO:0045787,GO:0045859,GO:0045892,GO:0045893,GO:0045930,GO:0045931,GO:0045934,GO:0045935,GO:0046425,GO:0046427,GO:0046483,GO:0046545,GO:0046660,GO:0046677,GO:0048285,GO:0048468,GO:0048477,GO:0048511,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048563,GO:0048569,GO:0048580,GO:0048582,GO:0048583,GO:0048584,GO:0048589,GO:0048592,GO:0048608,GO:0048609,GO:0048646,GO:0048663,GO:0048665,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048732,GO:0048736,GO:0048737,GO:0048749,GO:0048806,GO:0048815,GO:0048856,GO:0048863,GO:0048865,GO:0048867,GO:0048869,GO:0050681,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051094,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051301,GO:0051302,GO:0051321,GO:0051338,GO:0051348,GO:0051384,GO:0051385,GO:0051412,GO:0051427,GO:0051438,GO:0051444,GO:0051445,GO:0051446,GO:0051597,GO:0051704,GO:0051716,GO:0051726,GO:0051728,GO:0051729,GO:0051782,GO:0051783,GO:0060184,GO:0060249,GO:0060255,GO:0060341,GO:0060429,GO:0060562,GO:0061008,GO:0061062,GO:0061063,GO:0061458,GO:0061695,GO:0061982,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070192,GO:0070887,GO:0071310,GO:0071383,GO:0071396,GO:0071407,GO:0071495,GO:0071496,GO:0071704,GO:0071840,GO:0071850,GO:0071897,GO:0071900,GO:0080090,GO:0090066,GO:0090068,GO:0090304,GO:0090596,GO:0097134,GO:0097135,GO:0097305,GO:0097472,GO:0098727,GO:0098772,GO:0098813,GO:0140013,GO:0140096,GO:0140110,GO:0198738,GO:1900087,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901654,GO:1901698,GO:1901700,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902494,GO:1902531,GO:1902533,GO:1902554,GO:1902679,GO:1902680,GO:1902806,GO:1902808,GO:1902911,GO:1903046,GO:1903047,GO:1903320,GO:1903321,GO:1903506,GO:1903507,GO:1903508,GO:1903827,GO:1903829,GO:1904029,GO:1904375,GO:1904666,GO:1904667,GO:1904776,GO:1904779,GO:1904781,GO:1904892,GO:1904894,GO:1905114,GO:1990234,GO:2000026,GO:2000045,GO:2000112,GO:2000113,GO:2000241,GO:2000243,GO:2001141 |
| EggNOG free text desc. | Belongs to the cyclin family |
| EggNOG OGs | COG5024@1,KOG0655@2759 |
| Ec32 ortholog description | cyclin D3 |
| Ec32 ortholog | Ec-07_005490.1 |
| COG Functional cat. | D |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko03032,ko03036 |
| Exons | 5 |
| Model size | 5731 |
| Cds size | 1923 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2398.6487.1 >prot_H-paniculata_contig2398.6487.1 ID=prot_H-paniculata_contig2398.6487.1|Name=mRNA_H-paniculata_contig2398.6487.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=641bp
MAMPMACRRAVAMAPGGFIAIGSSTSTSSSTSKSTLSGPSLLQDADLSCS
EAWEKEADSPIKAALPRRQQQQQAPQLQSLQVANRTPPRRLRPRPSAVSF
KHDGCSKGLRREEKLEVLGNMLRAQAKFHPRTTATEAGAGGERRERAMCH
EVSPFVAERRRWFVAWKNQMASFLGYSRDTVAVALNYFDRYTCARPCSPT
LAQAAAATALHVAAKFEESNPASLRQLLKFTPVFTPDQLMVIEMSMLKVL
NWDLRPVTIYDFVRSFCDLMSTRTGSTPKTRQGRGDEKELRIGAEEIADL
CASEVSLLEFYPSTLAMSAVLLSASRPEAVTSHADVLDACVTAVGVSNNL
ISLERILDCIRLVGASLAKRLPAAGAAADIAAEQVIRYAALDVEAEVDVA
RDLAAVETTMSSGRGSGSPVPPAKKRRCSTPTSVDGIVHIEMAGMLDATA
ASGDNDGAGAIGVGSNASLACSRSSAVMTSSGGGGGEQSSNVAVAAREKG
SRRSANPHRPTPYAAPSAHGVMASTAAALGARAFSFSDDEVILAQGAKRG
VVSSVFIAAPENTPWQPQQLSSRRLPSSSSSVCSMGSRKRSAEALGHCES
GSGFGAPMPRCGGGKAASSTSAPAAAAVVDLVRGGRSGGL* back to topmRNA from alignment at H-paniculata_contig2398:6049..18623+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2398.6487.1 ID=mRNA_H-paniculata_contig2398.6487.1|Name=mRNA_H-paniculata_contig2398.6487.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12575bp|location=Sequence derived from alignment at H-paniculata_contig2398:6049..18623+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAAGAGTCTCAGCCCAGCCACATCGCATCAGTCGTCACAGCAGAGCCGAA
AACCTTTTCTTTGTGTTTGGTATACCCCAGTGCGTTTTGCAGCCAAAAAC
TGCAAGACACAAGAGGGCTAGCTGGATTCCTGTGCCTGTGTTCAAAACGC
GGGAACGAACTCGAGGGTTATCATACTCGTCCCATCCAGAGGATGGCGAT
GCCCATGGCGTGCCGGCGTGCGGTGGCAATGGCGCCCGGAGGTTTCATTG
CGATAGGCAGCAGCACCAGCACCAGCAGTAGCACCAGCAAAAGTACACTG
TCCGGGCCATCTCTTTTGCAGGATGCTGATCTCTCTTGCAGTGAAGCGTG
GGAAAAGGAGGCGGATAGCCCCATCAAGGCGGCCCTGCCGCGGAGGCAGC
AACAACAACAGGCGCCTCAGCTGCAGTCCTTGCAAGTGGCGAACCGAACT
CCGCCGCGAAGATTGCGCCCGAGGCCCTCAGCGGTATCCTTTAAGCACGA
CGGATGTAGTAAGGGGCTTCGCAGGGAAGAAAAGCTGGAGGTTTTGGGGA
ACATGTTGAGGGCACAGGCTAAGTTCCACCCTCGCACAACCGCAACGGAG
GCAGGAGCTGGGGGGGAGCGACGGGAGCGAGCAATGTGTCATGAGGTGTC
ACCTTTCGTCGCAGAGCGTAGGCGGTGGTTCGTTGCGTGGAAGGTGAGAT
TATTGCCCTCCAGCACATGATCAACCAGCGGTGGAGCTGTGGGTTGGATA
AGGCACACAGATTTATCATTGTTGTCAAGTAACACTGTTAAAACGCTGCG
TACCCGCGTGTTTTGCCCGAAGCTGCTGTATTTTTGTAAGGGAAAGCTAT
ATGCGAAGTTTTGTTCTTGAAGGTAGGACGATTTTATCCTTTTCTGAATC
GTGGTCGCATTCGCCTCCTGTAGTGTACATTGATGTATTTCGCGTTGCTT
CCTCGCGTTCTTTACTGCTGCGGCACCCTTTTACATGGGGAGACAACCGT
CTTTCGTGAAAACCATGATCTTACTGGTACAGCTGCGTTTCTGCTCGTCT
TGAGTTACGCTTTCGTGACATCAACTGAAACAAAAATCTACTGCTCGTAT
TCTCATTATTGCACCAAAGTCGAATCCTGGCAGAAATGACTGTGCTGTGT
ACATTACGGTCGTACACCTCCCGCTGTACATGCGTCCCAAATAAATGCTT
CCTGCCCATGTTGGTGCTTGAGTTGGAGAAACGACAACCTACTCCGGAGT
GCTGTAACCCGAACACTACTAATCTCTGTCGTGCCTCTACGTGGTCGTTG
ACTTGATGTGGTGTTCGACCTTTGCACCAGCAGCAGCACCTGCCGCAGAA
TCATTACATCACGAACGAAGTCTTGACTTACATTACAAATAGTCAGCACA
AGTCAGTATTGAGTTTTGCTTTCTGTACCCTTCAGCCCCTTTCAAAAACC
TGCCTGTCATACATTTCATATCCACGAAACCTAGCCTGACATGAACGTCG
CTCAAGTATTTTATGGGGGATAATCAACAGTCAGGATATACAGGAGTTAG
TAAATGTCCTTGGTGCCTTTACTGACCCCATGTATCTTGATCATTCTCGA
ACGGCAAGGCATCATCGTCGAACTGCAATTATCATTTTATCTCCTGTAAT
GCGTTTTTTTTCCTGACAAACTATTTGCTCTGTGACCCACTGCAGATATG
AGTATCCTGTTTCCGGTTCTGCCCCCGACCTGCACTCAGGGAGCAGATAT
CTGTAAAATTGTATTTGTAGTATCCACAAGCCTGCTTTCGTGTCGTGTTC
CTTCCATTCTGTCGAGAGCCCTAGTTAGACGTGGCTTCCTGGCTTCACTT
CTGCTCTGTTGCACCGAGGACGATGATTTATGTACAGGCCATCGTATGCG
AAAACTTCCCAGAATAGGTGGGCACAACCAAATGCCATTGCAAAGTATGT
AGCACAGGAGACCGTCTCCTCTTCTCCAATTTAGACCACATACATGTATT
TCAATATTTTGATTAGCTCATCTCAGTTTCTTTTTCGGAAAGTGTACATC
ATATGTTGTTCACTACTGCCTTCACGTGTACACTATCCCGAAGTTTCTCT
ACATCATTGGACATGTGATGATGCGTCGCTCCCTTCACCTGCTTCGCGTT
TTTGCTAGCATGTTCACATGCGTTTTTGCTATGAGCCCCGTCACGAGTTA
ATGCACAAGGCGTATGGCTAGCTTTCCGCATCTCATTACTCCCTCCAACA
ATACATCAGTTATTGCTGCTCGCCTACCCATGCCATGATTCCCAATGGTT
GTGTGTATCTGTAACATCTCGTCGTTGTATGCTCAACGGATGGATGTCAT
GTACACGATGGTAGCCAGTTGCACCGGAGTGCTTGGCTAGACCTCTATGC
AGACAACGGTCCATTGCTGCTTGGTGTATCTTAGTGCGTACCATGGTGGT
CTTTTTAGGGTTTTGATGGTAATACATATGAAACTGCTTTCGCCGTTAAT
CCGACCTGTAATAATTTACTGTGTCACACTGTGTATCTGTCTAACCTCTT
CCATATACCTCGTCTGGTGGTCGTGTGCTTGAGAGGAAAGTTATCCCGTT
ATCGCACATTACTCTGTAAATCGTAGTGCTTGGGAACCGTATGCCTGGGT
TTAGTGCTTTGCTCGTCGGTAAACTATGGCTAAACTATTTATCGCTTGAG
CCTTCAGTACTCTCTCCCATCGTAGGTCTGGGTTTCGTGCTTTGCCCATG
CGGAAACTGTATCTTTAGGTTGAGGCTGTTGTACTATCATAATTACACTG
TGGTCAGGTTTCGCCCTTACTATGGCATACTGATCAGATTTCGCCCTTGA
CATATTTTTTCGGTTGAACTGACCATCTCGTTCACCTCAAAGTTGAGGTC
AGTATGATTTTTTACCAGTTCATTTACCTGGCGATGTCTAGCGTACTGTG
CCTGTTTGTTTGTGTGTCATGGGCGATTGTTGTCATGTATGGCTTATTTT
AATTCCCATTCAACTCGTGAAATCGTGAAGGCACCTTTGATGTCTGGTAT
AGAACAGTCATCATGCATGCGTACATGCCATCTCAGCAAGTCAGGAAAAA
TATCAATTTTGGTATTCAATTCGCTACCTCTCGGACGTGAGTGATTATTC
CATTCTTTCCTGGCTGTCAGTACTTGTTCGTCCGTGGGACGTGACGTTGG
AGAAGCTTTTTGTTTAAGATCGAATTGCGCGTTAGCAAGCTACCGCGGTA
TCATCACATGTAAACACCCGTGGCATAATTCCCCCAGGTGTGTTGACGGT
TGGATGTCCGTCGAGCGCGAGTTGTGGAATCAGTGTAGCGATGCATGCGC
ACGATCCATTTCTCTGTCAAATCAACCCCCCTCCCTCATCCCCCTAAAAA
AACAATGAAATTCTGTGACTGGTTAACCGAACATCTGACTAATTTACGCA
GTTCCTTGTTTTTGGAATGAGTTACAGTACAAAAAGATTTCAGGATGTTT
CTTTCGCCCTTTCCTGAACGGCAGAGGCTATGTCTCTCATACGTAACAAT
GATTCCGAGACGAACAAAGATTGTTGTCTTGTGGGCGCTGAAGACTAATC
GAAGCAAGGATGATTTTAACCTCTAATACGTCAAGTGGTGAAATTGCTCT
GTGACATCATGCTACCTCCCGGCCTGTGCCCCGCCTACTGCATCTGTACT
GGAGTGGCTGTTTTAAGCAAGGATCGACGAAATCCTTTTGCGCCTGTAGG
CTATTTCCATACCAAAATATTAGAGTGGCCATGGTGCAGTAAAGGTCGTC
AACTTTTTAGTGCCATATTCATTCGAAACATTGAAGAATCCTACCGAATA
TATAGGGAGCACTGTAGACGTTCGCGCAAAACCATCCTATCCCTTCGCCT
GTGCTCTACTTGTAGAGCGTTGGCGTGGTTGTGCTGCAGTCGCTGTTTGA
ACAAGTCACGGATCCCTCTCCCTGATCATCTCATGTATGTGTTATTTTGC
ACCTGTTATTTTTCGGGTGGAGATTCGCGTGACAATGACTAGCGCCGAAA
AGGTGGCACAAAGGAATAGAATGAAACGTCGGAGAGTAGTGGGGAAGGTG
ACACATCATGAGAGACTGACAACGACTTGGAATTTTGATGAAATTTGTTT
TGCTACCCTGCCCGTCTTGTCACACCTCTCATGTTGAAGCAATGTCGCTT
AAGTAAGGCACTCCCATGTACTCGGTACGTGTAGTTTGATTTATGTGCCA
AAGTGTTCGGGCACCTACTCGGGATGTCTGCTGGGTGCGGCGGCTTGTGA
TCGAAAGGTCAGGCCTAAGCCTGGGCATATATTCACTTACGCAACACTAA
AGTTTTCACTACAGGGGATGAGAATGATCAAGCGCTGAGTGGCCTTGCCT
GCTTTCTCACGCCGCCTCTTTTCGTGGTTGCCTTTATCCAGCGATCTACT
TTATTTTCCTTCAGTTTTTGTCACCTCTTGAAACGTGAACGTACCTTTGT
TCTTTCTAACACCCGAAGAATAATTGTTGAATCACGGGAACCCTACACGG
CATTTAGTTTGTCCTTGGTTTGGTGTCGATTAGCTTACGTTGGGTTAGGT
TTGGTATATACCAGTCATTTTAACGCTCCATTGATTTTCGCTCCTGACTA
TTGGGATCAATCACTTTTGTTGTTCTCGAGTGTAACTGAATTGTGTGATG
TTCAATTATTGCAGATGAGATATGATGGGTGCCGTGCTATGAGATTCGAC
ACAGGTAGGGCCAAGTTGCTTTTCCCAAGTGTTTTGAAACTCGCAGATCG
CTCGACAAAAAATGGCGGAACCAAGCCACTGCACGACTCTTCTTCCACGA
AAAAGCGCTGCGGTGTCGAAGGAGTATCTTGACGCCTGCGGTGGCAAGTT
GCCAAACGTGTTGCTAAGGGCAACAAAATTACTGAGATGCGTACAGTTTA
TAATGTATAACACTGGGTCATACCAGTGTGATGAGGTCGCCACAGACTGA
AGCTGGACATGTTGCGCTTGATTTTGCAGGCGATGTATTTTGTTCGACCT
CAATCCGTTCGAAACTGATGCAAAATCCATGTTCTCAAACCTAGTCTACA
TCAGACAAATCAGACGAACAGCTCAAAACACCTTTAATGTGAAATGCACT
ATCTCCCCCAATATCGGAGGGATATAAATATGATGAAGGGGTCCAGGTCG
GCAACGGCTTTCATCAGAACCCATCGCGTGAGCACTGGTTCTTTCCATAG
GCTGTGGTGTTTATGCAGATTTTGTTTCGCATCAGTTGATTCGTGTATTG
GAACTCTGTTGCATACTGTGACTATACCCGAGGGCTAGCATACGCGAGCA
CCGCTCCACCATGTCCCGTATGATCTTACTGGTACGCCGAAATGACAGCA
GCTGAAGCGAGATCCAACCGTGATTTTTATTGCGTGTCTAAATGTGTCAA
GGTCCACTGTTGAGCTGAGCTTTGAAATTTCCAAGTCAATTGAAGGCAAC
CTAAAAATGCATATGAGTGGCTGGACAGAGTCAAGTTTTCAGCGTCACTT
TTAATTTGCCAAGGATTTGGGATCTCTCGCACTGCAGGACAACATTGAAT
ACCAAAACAAAGTTAAACTGGGCGGTCCAACAGTGGATATGGTTGAACAG
GTGATTAGCATTTCAAACGTTTCATAGTCTCGGCTGGTTGTGCCGGATTG
GCCGCAACGCCCAGTTGTCGATACGTCGGAAGGAAATTACGCTACTGATG
GGAAGATGTTGAGGGCAAAACGAGTCAGCGAATAGGCGTATTTTTCACGA
TTCCGTGGAAACACGTGGGCAAATGAGGGTTGGCGAGAGGCATATAGCAC
ATGATTGATAACAGTTAACAGTCACAGGGTCCTGTTTGAATTTAAGGATG
TGGCAATTATCTCCCCGACAAGGAGATGGGAAGGTGGCATGCTTTTAGTG
GTCGATACGTTTTTTGTGATAGGATGTTGAGAGTGTGCTTGACACGACGC
ATCTACGGCCGGAGAGAACAACCAAGACGAAGTACATTCCACACCTCGTA
ATTTTATTCGAAGTTTGATGTTTTCAATGCGCACATACGTGAACAAGAAA
GAGTGATATGCAATTCTCACCTTGGCGTATGTCCTCTCTCATGCCACTCT
CATTTGTCACTACGCAGTATTCAGTTCCTGGGCCATTGTCCGTCACGTCA
TCATGCTCGACATAACACCATGTACAAATGTCTGGATATCGTCCGTTTGA
TCAAACTGTTGAGACCCTCCGACCTATTTTCAGTTGGATTTCTAACCCCC
CATTGCCCTTCTTCCCGAACCGCTGTCGATGATTTCCTGTTGGACGTTTC
CCGTAATTTTTTCTGGAAAAGAATCAAATGGCTTCGTTCCTTGGGTACAG
TCGGGACACTGTAGCGGTGGCCTTGAACTACTTTGACCGGTACACATGTG
CGAGGCCCTGCAGCCCCACTCTGGCGCAGGCAGCGGCCGCGACTGCTCTT
CACGTCGCGGCCAAGTTCGAGGAGTCTAATCCCGCGTCTCTGGTGAGACC
GTCATTATCCGAGGGTTTTTCCGCCAAACAGTACCGTGGGTTGGCTTACT
GGCCTCATGCACTTGATCAAAAGTTGAGAGGTTTTTTTTTCAACGGCCCA
TCTTGGATACCGCCGACGAAGTTGGATCGCTTTTGCTTTTTGGTTTCATC
CGTCCCTCCCTATCATTGAAACTCGTTTGGGAGACGATCGAGGTTCTCAA
GTAAAACAGTAAAGACTACTGTCGTGTAGCGTGTTGCGTCTACCGAATAT
TTTTGTATTGGTAGTTTACAGGAGCGGAAAAATGGAAAATGTCGAATATA
TATTTTGATCAATGGAGTTTAGTTTAGTTTAGCTGTGTGCTGTCCATGCT
ATCATATATTAGGTGGAAACCAATTGCGCTGTCCTGGTCTTCGCGTTTTT
TTTTTAATTCGTGCCCACTTGGATCCTCCGCGATTCTTGTTTCCCCGTTT
TCTCCCCTCCCCTCTCCCCGCTTCCTCGCCTACCCACCGCGCAGCGTCAA
CTGCTCAAGTTTACTCCGGTTTTCACACCTGACCAGCTCATGGTTATTGA
GATGTCGATGCTCAAGGTACGTAACCATTGTCGTAAAGTTTTTGTCAAAT
GTACACACACGCTCGGGTTATAGATGTACGTCAAATGTAATTTGAAGAGA
ACAACGCAGTTGATGGAATGAATTAGGTTTTTTGCAGGAAGCCGAACGCC
TTATGGCCAATTGCGTGATCAATCATGCCGTATTCTGATTGCCACGACCT
GCGCAGGTGGGCTACCTGTTGCCGACCCACGTCTTATCTGTCCAGTCGAT
GACGCCAAAAACATGAAACGCCCCACCGAAATGCCACATCCTGCCGTCTT
CACTGCCTCCCTCGATCCCTCCTCGACGTCCTTGTATGCTGATTGCCAAC
ATTCCTAACTGGAAATGCCCAATCAGGTGCTGAACTGGGACCTTCGGCCG
GTCACCATTTATGATTTCGTTCGTTCCTTCTGCGACCTAATGTCCACTCG
GACGGGATCCACTCCGAAGACGCGCCAGGGGCGGGGAGACGAGAAAGAGC
TGCGAATCGGTGCCGAGGAGATCGCAGACCTTTGTGCCTCTGGTGTGTGT
TGACACTGTGGTTTAGTTTTAGCAGCAATGAGCCGTGGGTCAAATATGGT
CTTCATCCAGGCGTTTACAGCAGTAATGTGGAAAAACACGTACGGTTAAT
GGGTGAAGTTGAGTGTCAACTGCATGACAAGATTTGGCCAAATTATTGTT
TTGACGCTGCTTTCTAGTATGTCGGTTGCACGTGTGTAAGTATATGCGTG
CAACACGACATTCCTTCCCGCCCTACCCCGCCCACCCTACCCCGCCCACC
CTGGCCCCTCTCCACACTCCCGTGCCTGCCCACCCGGTATTACCAGAGGT
GAGCCTCTTGGAGTTTTACCCTTCGACCCTGGCAATGTCGGCCGTGCTGC
TGTCGGCGTCGCGCCCGGAAGCCGTCACCTCGCATGCCGACGTCCTCGAC
GCGTGCGTGACGGCTGTTGGCGTGAGCAACAACCTCATCTCGCTGGAGCG
CATCCTTGACTGCATTCGGCTTGTTGGCGCCTCCCTCGCCAAGCGCCTGC
CCGCCGCTGGCGCAGCCGCCGATATCGCGGCCGAGCAGGTGATTCGCTAC
GCCGCCCTGGACGTGGAAGCGGAGGTCGACGTGGCTCGGGATCTCGCGGC
CGTGGAGACGACCATGTCCTCGGGCCGAGGCTCGGGGTCTCCGGTTCCGC
CCGCCAAGAAGCGCCGGTGCTCCACCCCGACCAGCGTCGACGGTATCGTT
CACATCGAGATGGCCGGCATGCTCGACGCAACAGCGGCGAGCGGTGATAA
TGACGGTGCCGGAGCTATTGGAGTAGGGTCGAACGCCTCTTTAGCTTGCT
CTCGTTCTTCAGCAGTAATGACTAGCAGCGGCGGAGGCGGCGGCGAGCAG
TCTTCGAATGTCGCCGTCGCTGCCCGCGAGAAGGGGAGCAGAAGGAGCGC
CAACCCTCACCGGCCGACCCCGTACGCTGCACCCAGTGCGCACGGTGTAA
TGGCCAGTACGGCAGCGGCACTAGGCGCGCGAGCATTCTCGTTCTCCGAC
GACGAGGTCATTTTAGCGCAAGGTGCTAAGAGGGGCGTGGTTTCGTCCGT
TTTCATCGCCGCGCCAGAGAACACTCCTTGGCAGCCGCAGCAGCTGTCCT
CGAGACGTCTCCCCAGCTCGTCGTCGTCCGTGTGTTCCATGGGCAGTAGG
AAGAGGTCGGCCGAGGCACTTGGACACTGCGAGAGCGGATCGGGGTTTGG
CGCTCCGATGCCTAGATGCGGTGGTGGAAAGGCAGCTTCGTCGACGTCGG
CGCCGGCGGCGGCAGCCGTGGTGGACCTCGTTCGAGGCGGTCGATCTGGT
GGACTGTGACGATGCTTGCTGACTGCGATGAGAGAAACGGACTCATCGCG
CGCGTGGAAACATACTGGATATAGGCCGTTCGTTAGTATCATGTGCTTCC
AGCGCGCGGGGCCTGCAAAATGAAGGTTTTTCTTTTTCCTTTTTTGTTTT
GGCCTGAGACGCCGCGGTTGAAGAGCGCCCGCCATCGCTCACCCATGAGC
GCTGAACTGGAGCGGTCCCTCAGGAGTTTTTTTCCATCTGGAGTATCCCA
TCATCAACATTATGTCACCCAGGAGACCTATCAACGGTGCTTCTTTCATT
TATCGCACTGACGCTGAGGTTGTGTACGATTGAATGGCTGCGCATCAGTG
GCTTAAAGCTTTTTCGCGCTCCCTTCAAGGTCGGCGCGTTATTGCTTCGT
CCGCTGGCGGAGATCATGGAGAAAGGCCGGGTCCGGCAGCAGATGCTTTG
CTCTCATGTGAACAAAATGAGTCAAGTCTTACCCATATTCAGTCCAACGT
ATGGTTGATGAATGATAGTGCTCTATGGTGGAACGACCAGTTTTTTCTGT
TTTATGCTATCGTGTATTTGGGAAGAGACCACATCTTTTCCTGTTCCATG
CTATATGTAGATGTGCGGCGTCAGTTGTTTTACTTGTGCGGGGAGCAACG
TCACTTTTTTCTTCCATCCCTCATTGTTTGCAAGGGAGAGGGGAAAACGT
TTTTTTTTTTTTTTTTTTTGTCGTCGCTCCCATCATGACGCTATTCTGTG
GTTCATGGCACTGTCATCATCTTCGTTCGCCTATGCAGCTCCTCCCGATT
CAGTTTCCTTGATCGATGCCGATGTGTGATCAGTAGGCGGGACAAGGGGA
AAAAACAAAATGGGGGCAGGCTGCAATTTTGAACGAAAGGGATGAGTGTA
GTCGTAGTTTTGTATTCAACGATGGGGCAGCACCTGCTTTGCAGTCCTCG
GTTCCACGCATTGACTTTGCGTCGCGCTCGTCGTTCCTTGCATTATGTGG
GTTGGAAGGTGGGGGTTTATTCCGAGGGAAAGCCAGGCGGTTGATAAGGT
CGGTTTGCAGCGTGGTGGAAGTTTGTTTTGTTTCGTTGGCAAAAATGTGC
ATCCATCCATCGTATCTTCTACATGGGTCGGTCTTTCCAAGAAAATCGTG
GTAGGAAAGAGGTTGTCGACGACAGGTCAGCTCCCCACGTATTGAGGACC
AATCTTGTCCTGTTTCTTTTGTTTTGGCTTCTCTCCCCCTTCTCGGTCGA
TTCTTCTAGCCCATTGGTGTACGTGGTACGTGTGTTGTGTATGTGTGTAT
GTGTTACGTGTGTCTAGTGCGTGTTTCATCTGTGATCTCATCTCGCACGT
TGAGTGTGTAATATGATCGGAGCCATGTTGCGACTTCTTATGGTTTTATT
CTATAGCAGTAGTCCGGGGCAATTTGGAAGGTGGTCACCCGGCGGAGGCT
TTTGGCGTTTTGCCCGTTTTCGGGTGCGCGGTATTGATTTTTGCACGAAA
CACAAAAAAAAGAGATGAACAAAAAAAAGAGAGAAATGACCGCCCATGCA
GCCACTTGCTGTATGATCAGGCGCCATCTTTTTTTTCGTACGTGTGCGTT
TTTTGAATCCCGCACGTTCACTTCAGTAGTGAGCGTGAGTTACAGCACTC
GAGTTGTGAGGGGTCACTGATACGATGGTTACTACGTGTTGAGTACGACG
CTGCGGAGTACAAGATCGGTCAGCGGGGGGAATAAACTATAGGCAGACAA
AATGAGATCCATGTATTGGTGGGGAGGGATGAACGTTTCCATGACGTCCC
AGCACTTTACCGTTCGGTGTCGACGAGATTGACATGGTTTGACGTTCACT
GTTTCTTTTTACGAGGCCTGCGACACGTTTAACAAGAGATGAGGTCTACG
AGAGGGCGGAGAGGATGGCGTTGTCGGTGATTTTGATGTCTTGTGTTTTT
TCCATCGGGACCACACCCCATGGCCACTTCCGTTTTTCGTGCGCCACATG
CCAACTCTCTTTGGCCATAATCTCGAGCAGTTGCGCCTCTTTTTTTTTTT
TTTTCACAAGTGTGAGGCCGTTTGTTTGTGTCTATGTGTATGCGTTTTTC
TCTTGTCTCTCAAGCTTGGTCTTGATGAGTCCGAGAGTACCAATAGCAGT
ATAGTAGCATTGCAGAAAAAACAAACACACACGAGCAAAGGCGTGACAGT
GATCGTTGGATGATCGGTTGTCGCTGTTTTTGAGACGTGATTTTCGTTGA
AAGCTTAGGATTCGTTCAATCGTCGAACGATGTTGAATTGATCGGGCGGG
AACGTCGAGACAGAATAAAAAAAATAAGGTTTTCATCGTTTGGGGGGAAG
TTTTCGCGACGTGGTGCGGCGGTCTTCTCCTTGTGCGATCCTAGTTTTAG
GTCTGTTGCTTAGCTGAATTGTTTTTTTTCTTTGAGTGAATATACTTGAT
AAAAAGTATGTCGTGTGGCGGGTCAGTGGGAAAAATGCAGGTTCTGACGG
AAGCTGAGATGGTTTTCCTTGTACCATCAAGGCAATTGCAAAGTACGTGC
TTGGTGGGCTTGTTACTGAACGCCCGTAGCCTCGGTCCCCAGTATTTGGC
CGTCGGCATTGGATCGCGTTTTTTCCTTTGAATTAATGTCCAGAGCCTCT
TTCTCTTTTTCCTATTTATCTTACTGCTGGTTTTGATTGTTTTCGTTTCT
TGTCTTTTTTGTTTCTTGCCTTGTTTCGGCCTCGCCTTCCTTCCCCCCTC
ACTCCCTGCCCCTCTCCTCTTCCTCCCTGGGAAGGAAGGTGACCTGATAT
AGGTTAGCAAGACGAATTATGGTAGTGTAGTAGATTCTATTTTTTTCACC
ACACATGAATCTCTCGAGGCAAAGACGGAGAGGCTTCATGGGATATAGGA
GGAGCTAGTTCAGGTAGAGGTCGGGTGGGCGGTGATGATGGGGACATACG
GGGAGGGGGCGGGTGGCGCATAAGGCGGGATGGTGTAAAGTGTTTGGGGC
TTTTCGCCTTTTGGAGTGGAAAACCAGCTGTCGAGCAAGTTTATTAAGAG
GGTATGTATGTACTAGAATTCAGTTCGTTGGATTGGGGCTGCTGCGAGGA
AGAAGTGCTCCGGTGAGCAGGCGTTAGTTGAATGTCCTTCGACGTTTTAT
TTTTTGGCCGCTTGATTTCTTCTTTCGGGGCGGCAATACTCTCTGGTCTC
TCGTATCATTTATCTCTTGATTTTAGGAAGTCCATTTGCTCTGTTCGCGC
TTTTGGATGCACTGCGTGATGAGTTTACGAGGTTTAGCTAGTGCATGACA
TTGATGACACCTAGGAATGGCAATGGGCGGAGGGAGGATCAGGTGTGTGG
TACATTGGGCATGTGGGAGGACTTACTCCAGCCGGAGGAGAGGCAGTCTT
GTGTTACGGAGTATCCGACTGCATATTGTACGTGTTTACATTGTTCTTTC
TATCTTGTCTTTTTGGACTCGCTTGTGTACTGAGGAAGGGTTCTTGGGGT
CTTGTGGGTAGTTGGGACGTGTCTGTGTTTGTTTCTCACCAGGGAAATTT
CGTAGGAAGGGAGACGGTTTTTGGGGATGACGTGGGTCTTGTTTTTGCTC
ATGGTGCGTTAGATTTATGGGTGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig2398:6049..18623+ >mRNA_H-paniculata_contig2398.6487.1 ID=mRNA_H-paniculata_contig2398.6487.1|Name=mRNA_H-paniculata_contig2398.6487.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3846bp|location=Sequence derived from alignment at H-paniculata_contig2398:6049..18623+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGATGCCCATGGCGTGCCGGCGTGCGGTGGCAATGGCGCCCGGAGG
TTTCATTGCGATAGGCAGCAGCACCAGCACCAGCAGTAGCACCAGCAAAA
GTACACTGTCCGGGCCATCTCTTTTGCAGGATGCTGATCTCTCTTGCAGT
GAAGCGTGGGAAAAGGAGGCGGATAGCCCCATCAAGGCGGCCCTGCCGCG
GAGGCAGCAACAACAACAGGCGCCTCAGCTGCAGTCCTTGCAAGTGGCGA
ACCGAACTCCGCCGCGAAGATTGCGCCCGAGGCCCTCAGCGGTATCCTTT
AAGCACGACGGATGTAGTAAGGGGCTTCGCAGGGAAGAAAAGCTGGAGGT
TTTGGGGAACATGTTGAGGGCACAGGCTAAGTTCCACCCTCGCACAACCG
CAACGGAGGCAGGAGCTGGGGGGGAGCGACGGGAGCGAGCAATGTGTCAT
GAGGTGTCACCTTTCGTCGCAGAGCGTAGGCGGTGGTTCGTTGCGTGGAA
GATGGCGATGCCCATGGCGTGCCGGCGTGCGGTGGCAATGGCGCCCGGAG
GTTTCATTGCGATAGGCAGCAGCACCAGCACCAGCAGTAGCACCAGCAAA
AGTACACTGTCCGGGCCATCTCTTTTGCAGGATGCTGATCTCTCTTGCAG
TGAAGCGTGGGAAAAGGAGGCGGATAGCCCCATCAAGGCGGCCCTGCCGC
GGAGGCAGCAACAACAACAGGCGCCTCAGCTGCAGTCCTTGCAAGTGGCG
AACCGAACTCCGCCGCGAAGATTGCGCCCGAGGCCCTCAGCGGTATCCTT
TAAGCACGACGGATGTAGTAAGGGGCTTCGCAGGGAAGAAAAGCTGGAGG
TTTTGGGGAACATGTTGAGGGCACAGGCTAAGTTCCACCCTCGCACAACC
GCAACGGAGGCAGGAGCTGGGGGGGAGCGACGGGAGCGAGCAATGTGTCA
TGAGGTGTCACCTTTCGTCGCAGAGCGTAGGCGGTGGTTCGTTGCGTGGA
AGAATCAAATGGCTTCGTTCCTTGGGTACAGTCGGGACACTGTAGCGGTG
GCCTTGAACTACTTTGACCGGTACACATGTGCGAGGCCCTGCAGCCCCAC
TCTGGCGCAGGCAGCGGCCGCGACTGCTCTTCACGTCGCGGCCAAGTTCG
AGGAGTCTAATCCCGCGTCTCTGAATCAAATGGCTTCGTTCCTTGGGTAC
AGTCGGGACACTGTAGCGGTGGCCTTGAACTACTTTGACCGGTACACATG
TGCGAGGCCCTGCAGCCCCACTCTGGCGCAGGCAGCGGCCGCGACTGCTC
TTCACGTCGCGGCCAAGTTCGAGGAGTCTAATCCCGCGTCTCTGCGTCAA
CTGCTCAAGTTTACTCCGGTTTTCACACCTGACCAGCTCATGGTTATTGA
GATGTCGATGCTCAAGCGTCAACTGCTCAAGTTTACTCCGGTTTTCACAC
CTGACCAGCTCATGGTTATTGAGATGTCGATGCTCAAGGTGCTGAACTGG
GACCTTCGGCCGGTCACCATTTATGATTTCGTTCGTTCCTTCTGCGACCT
AATGTCCACTCGGACGGGATCCACTCCGAAGACGCGCCAGGGGCGGGGAG
ACGAGAAAGAGCTGCGAATCGGTGCCGAGGAGATCGCAGACCTTTGTGCC
TCTGGTGCTGAACTGGGACCTTCGGCCGGTCACCATTTATGATTTCGTTC
GTTCCTTCTGCGACCTAATGTCCACTCGGACGGGATCCACTCCGAAGACG
CGCCAGGGGCGGGGAGACGAGAAAGAGCTGCGAATCGGTGCCGAGGAGAT
CGCAGACCTTTGTGCCTCTGAGGTGAGCCTCTTGGAGTTTTACCCTTCGA
CCCTGGCAATGTCGGCCGTGCTGCTGTCGGCGTCGCGCCCGGAAGCCGTC
ACCTCGCATGCCGACGTCCTCGACGCGTGCGTGACGGCTGTTGGCGTGAG
CAACAACCTCATCTCGCTGGAGCGCATCCTTGACTGCATTCGGCTTGTTG
GCGCCTCCCTCGCCAAGCGCCTGCCCGCCGCTGGCGCAGCCGCCGATATC
GCGGCCGAGCAGGTGATTCGCTACGCCGCCCTGGACGTGGAAGCGGAGGT
CGACGTGGCTCGGGATCTCGCGGCCGTGGAGACGACCATGTCCTCGGGCC
GAGGCTCGGGGTCTCCGGTTCCGCCCGCCAAGAAGCGCCGGTGCTCCACC
CCGACCAGCGTCGACGGTATCGTTCACATCGAGATGGCCGGCATGCTCGA
CGCAACAGCGGCGAGCGGTGATAATGACGGTGCCGGAGCTATTGGAGTAG
GGTCGAACGCCTCTTTAGCTTGCTCTCGTTCTTCAGCAGTAATGACTAGC
AGCGGCGGAGGCGGCGGCGAGCAGTCTTCGAATGTCGCCGTCGCTGCCCG
CGAGAAGGGGAGCAGAAGGAGCGCCAACCCTCACCGGCCGACCCCGTACG
CTGCACCCAGTGCGCACGGTGTAATGGCCAGTACGGCAGCGGCACTAGGC
GCGCGAGCATTCTCGTTCTCCGACGACGAGGTCATTTTAGCGCAAGGTGC
TAAGAGGGGCGTGGTTTCGTCCGTTTTCATCGCCGCGCCAGAGAACACTC
CTTGGCAGCCGCAGCAGCTGTCCTCGAGACGTCTCCCCAGCTCGTCGTCG
TCCGTGTGTTCCATGGGCAGTAGGAAGAGGTCGGCCGAGGCACTTGGACA
CTGCGAGAGCGGATCGGGGTTTGGCGCTCCGATGCCTAGATGCGGTGGTG
GAAAGGCAGCTTCGTCGACGTCGGCGCCGGCGGCGGCAGCCGTGGTGGAC
CTCGTTCGAGGCGGTCGATCTGGTGGACTGTGAAGGTGAGCCTCTTGGAG
TTTTACCCTTCGACCCTGGCAATGTCGGCCGTGCTGCTGTCGGCGTCGCG
CCCGGAAGCCGTCACCTCGCATGCCGACGTCCTCGACGCGTGCGTGACGG
CTGTTGGCGTGAGCAACAACCTCATCTCGCTGGAGCGCATCCTTGACTGC
ATTCGGCTTGTTGGCGCCTCCCTCGCCAAGCGCCTGCCCGCCGCTGGCGC
AGCCGCCGATATCGCGGCCGAGCAGGTGATTCGCTACGCCGCCCTGGACG
TGGAAGCGGAGGTCGACGTGGCTCGGGATCTCGCGGCCGTGGAGACGACC
ATGTCCTCGGGCCGAGGCTCGGGGTCTCCGGTTCCGCCCGCCAAGAAGCG
CCGGTGCTCCACCCCGACCAGCGTCGACGGTATCGTTCACATCGAGATGG
CCGGCATGCTCGACGCAACAGCGGCGAGCGGTGATAATGACGGTGCCGGA
GCTATTGGAGTAGGGTCGAACGCCTCTTTAGCTTGCTCTCGTTCTTCAGC
AGTAATGACTAGCAGCGGCGGAGGCGGCGGCGAGCAGTCTTCGAATGTCG
CCGTCGCTGCCCGCGAGAAGGGGAGCAGAAGGAGCGCCAACCCTCACCGG
CCGACCCCGTACGCTGCACCCAGTGCGCACGGTGTAATGGCCAGTACGGC
AGCGGCACTAGGCGCGCGAGCATTCTCGTTCTCCGACGACGAGGTCATTT
TAGCGCAAGGTGCTAAGAGGGGCGTGGTTTCGTCCGTTTTCATCGCCGCG
CCAGAGAACACTCCTTGGCAGCCGCAGCAGCTGTCCTCGAGACGTCTCCC
CAGCTCGTCGTCGTCCGTGTGTTCCATGGGCAGTAGGAAGAGGTCGGCCG
AGGCACTTGGACACTGCGAGAGCGGATCGGGGTTTGGCGCTCCGATGCCT
AGATGCGGTGGTGGAAAGGCAGCTTCGTCGACGTCGGCGCCGGCGGCGGC
AGCCGTGGTGGACCTCGTTCGAGGCGGTCGATCTGGTGGACTGTGA back to top
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