prot_H-paniculata_contig23958.6481.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23958.6481.1
Unique Nameprot_H-paniculata_contig23958.6481.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length471
Homology
BLAST of mRNA_H-paniculata_contig23958.6481.1 vs. uniprot
Match: A0A6H5KQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD0_9PHAE)

HSP 1 Score: 378 bits (971), Expect = 1.080e-123
Identity = 197/475 (41.47%), Postives = 294/475 (61.89%), Query Frame = 0
Query:    1 MPSDHKVIGTRWVFKVKADGKFKARLVVQGWSQIHGIDCGSTFAPVCRLESQRLLLALATAKDWAVFALDVQVAFLNGELQESVYCKQAPGFEKTHPTTGQPYVMSLKKSIYGLRQSPNVWNHTIDNELRSMGFTPTISDPCIYSKGSNDTYIMLSLFVDDILITGPTDKLLMDVRNQLMNKFTITDLGEVSLILGMEVLRNRQEGTLQLSQYKYVLSVLERFGMSSANPTKTPGVKTDPTTTGEDSTLLDTAATKEYQAMVGSLIFLTQCTRFDICFSVTQAARFMSAPTQQHLVAVKRILRYLKGYPDMPIIYNRGQPPLKGFCDSSYTT-----RSTTGSMFFLANGLVPFSSRQQKIIADSTTEAELIALAACAKQGTYLLNICRELGFQ-LDNFEVRSDNRGALHLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQLRSKVLTFG 469
            +P   K++GT++VFK K DG+FKARLVV G  Q  G D G ++APVCR+ S R+  A+    +W ++ LDV  AFLN      VY + APG    +  TG+P V  L++S+YGL QSP +WN T+D  L   G+  T SDPC+Y   S +  ++L+++VDDILITG   +L+   + +L ++F +TD+GEV  ILG++V R+ ++GTL +SQ  YV + LERFGM  ANP  T G   + +T      +L     K YQ+M GS+++L QCT+FD+ ++  Q ++  S P Q ++ A K +LRYL+G P +PI+Y RGQ  L  F DSS+       RSTTG +FFLA GL+ + ++ Q + A ST EAE+ AL+  A++  Y+ N   EL F+   +  + SD+ GAL +A N+ +S R+KH+A+R+  +R+ +   Q+ + H  S  QLADI TK+  +  F  +  ++  F 
Sbjct:   18 VPKGEKILGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRYVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTRLERFGMQEANPVSTLGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTQFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFS 492          
BLAST of mRNA_H-paniculata_contig23958.6481.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 384 bits (987), Expect = 4.740e-123
Identity = 200/467 (42.83%), Postives = 292/467 (62.53%), Query Frame = 0
Query:    1 MPSDHKVIGTRWVFKVKADGKFKARLVVQGWSQIHGIDCGSTFAPVCRLESQRLLLALATAKDWAVFALDVQVAFLNGELQESVYCKQAPGFEKTHPTTGQPYVMSLKKSIYGLRQSPNVWNHTIDNELRSMGFTPTISDPCIYSKGSNDTYIMLSLFVDDILITGPTDKLLMDVRNQLMNKFTITDLGEVSLILGMEVLRNRQEGTLQLSQYKYVLSVLERFGMSSANPTKTPGVKTDPTTTGEDSTLLDTAATKEYQAMVGSLIFLTQCTRFDICFSVTQAARFMSAPTQQHLVAVKRILRYLKGYPDMPIIYNRGQPPLKGFCDSSYTT-----RSTTGSMFFLANGLVPFSSRQQKIIADSTTEAELIALAACAKQGTYLLNICRELGFQ-LDNFEVRSDNRGALHLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQL 461
            +P D  +  TR+VFK+KAD +FKARLV  G  Q  G   G  +APV RL S R+L A+A    W V+ LDV  AFLN      VY + APG E+  PTTG+  V  L+KS+YGL QSP++WN  I++ L   G+  T SDPC+Y   S D   +L+++VDDILITG   +++   + +LM+ F +TD+GEV  ++G+EV R+ + GTL +SQ  Y   +L+R+GM  ANP  TPG   + +T      LL     + +QA+ GSL++L QCTR+D+ ++V Q  R  + P Q H+ A K +LRYL+G PD+PI+Y +G+  L  F DSS+       RSTTG +FFL  GL+ + ++ Q + A +T EAEL AL+  A++  Y+ N   E+GF+   +  + SD+ GAL +A+N+ +S+R+KHIA+RF  LR+  + +++ + H  SA  LADI TKH  +  F  +
Sbjct:  259 VPKDEDIFDTRFVFKIKADSRFKARLVAGGHRQRAGRHFGRNYAPVTRLGSIRMLFAIACEHGWEVYQLDVVAAFLNAYTDRDVYVRPAPGDEERDPTTGEMMVYKLEKSLYGLSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPKQRFATI 725          
BLAST of mRNA_H-paniculata_contig23958.6481.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE)

HSP 1 Score: 381 bits (978), Expect = 4.310e-122
Identity = 197/475 (41.47%), Postives = 295/475 (62.11%), Query Frame = 0
Query:    1 MPSDHKVIGTRWVFKVKADGKFKARLVVQGWSQIHGIDCGSTFAPVCRLESQRLLLALATAKDWAVFALDVQVAFLNGELQESVYCKQAPGFEKTHPTTGQPYVMSLKKSIYGLRQSPNVWNHTIDNELRSMGFTPTISDPCIYSKGSNDTYIMLSLFVDDILITGPTDKLLMDVRNQLMNKFTITDLGEVSLILGMEVLRNRQEGTLQLSQYKYVLSVLERFGMSSANPTKTPGVKTDPTTTGEDSTLLDTAATKEYQAMVGSLIFLTQCTRFDICFSVTQAARFMSAPTQQHLVAVKRILRYLKGYPDMPIIYNRGQPPLKGFCDSSYTT-----RSTTGSMFFLANGLVPFSSRQQKIIADSTTEAELIALAACAKQGTYLLNICRELGFQ-LDNFEVRSDNRGALHLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQLRSKVLTFG 469
            +P   K++GT++VFK   DG+FKARLVV G  Q  G D G ++APVCR+ S R+  A+    +W ++ LDV  AFLN      VY + APG    +  TG+P V  L++S+YGL QS  +WN T+D  L  +G+  T SDPC+Y   S +  ++L+++VDDILITG   +L+   + +L ++F +TD+GEV  ILG++V R+ ++GTL +SQ  YV ++LERFGM  ANP  TPG   + +T      +L     K YQ+M GS+++L QCTRFD+ ++  Q ++  S P Q ++ A K +LRYL+G P +PI+Y RGQ  L  F DSS+       RSTTG +FFLA GL+ + ++ Q + A ST EAE+ AL+  A++  Y+ N   EL F+   +  + SD+ GAL +A N+ +S R+KH+A+R+  +R+ +   Q+ + H  S  QLADI TK+  +  F  +  ++  F 
Sbjct:  226 VPEGEKILGTKFVFKKTLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSHALWNDTLDESLTVLGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMAGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFS 700          
BLAST of mRNA_H-paniculata_contig23958.6481.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE)

HSP 1 Score: 384 bits (987), Expect = 1.060e-121
Identity = 198/475 (41.68%), Postives = 295/475 (62.11%), Query Frame = 0
Query:    1 MPSDHKVIGTRWVFKVKADGKFKARLVVQGWSQIHGIDCGSTFAPVCRLESQRLLLALATAKDWAVFALDVQVAFLNGELQESVYCKQAPGFEKTHPTTGQPYVMSLKKSIYGLRQSPNVWNHTIDNELRSMGFTPTISDPCIYSKGSNDTYIMLSLFVDDILITGPTDKLLMDVRNQLMNKFTITDLGEVSLILGMEVLRNRQEGTLQLSQYKYVLSVLERFGMSSANPTKTPGVKTDPTTTGEDSTLLDTAATKEYQAMVGSLIFLTQCTRFDICFSVTQAARFMSAPTQQHLVAVKRILRYLKGYPDMPIIYNRGQPPLKGFCDSSYTT-----RSTTGSMFFLANGLVPFSSRQQKIIADSTTEAELIALAACAKQGTYLLNICRELGFQ-LDNFEVRSDNRGALHLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQLRSKVLTFG 469
            +P   K++GT++VFK K DG+FKARLVV G  Q  G D G ++APVCR+ S R+  A+    +W ++ LDV  AFLN      VY + APG    +  TG+P V  L++S+YGL QSP +WN T+D  L   G+  T SDPC+Y   S +  ++L+++VDDILITG   +L+   + +L ++F +TD+GEV  ILG++V R+ ++GTL +SQ  YV ++LERFGM  ANP  TPG   + +T      +L     K YQ+M GS+++L QCTRFD+ ++  Q ++  S P Q ++ A K +LRYL+G P +PI+Y RGQ  L  F DSS+       RSTTG +FFLA GL+ + ++ Q + A ST EAE+ AL+  A++  Y+ N   EL F+   +  + SD+ GAL +A N+ +S R+KH+ +R+  +R+ +   Q+ + H  S  QLADI TK+  +  F  +  ++  F 
Sbjct:  382 VPKGEKILGTKFVFKKKLDGRFKARLVVGGHRQEPGQDYGRSYAPVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVTLRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFS 856          
BLAST of mRNA_H-paniculata_contig23958.6481.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 348 bits (892), Expect = 1.110e-109
Identity = 195/481 (40.54%), Postives = 278/481 (57.80%), Query Frame = 0
Query:    1 MPSDHKVIGTRWVFKVKADGKFKARLVVQGWSQIHGIDCGSTFAPVCRLESQRLLLALATAKDWAVFALDVQVAFLNGELQESVYCKQAPGFEKTHPTTGQPYVMSLKKSIYGLRQSPNVWNHTIDNELRSMGFTPTISDPCIYSKGSNDTYIMLSLFVDDILITGPTDKLLMDVRN-------------QLMNKFTITDLGEVSLILGMEVLRNRQEGTLQLSQYKYVLSVLERFGMSSANPTKTPGVKTDPTTTGEDSTLLDTAATKEYQAMVGSLIFLTQCTRFDICFSVTQAARFMSAPTQQHLVAVKRILRYLKGYPDMPIIYNRGQPPLKGFCDSSYTT-----RSTTGSMFFLANGLVPFSSRQQKIIADSTTEAELIALAACAKQGTYLLNICRELGF--QLDNFEVRSDNRGALHLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQL 461
            +P   K I ++WVFK KADG FK R+V QGW+Q+ G+DCGST+APVCR++S R++  +    +     +DV  AFL  ++QE V+ +Q PGFE      G   VM L KS+YGL QSP  W +TID  L  +GF    SDPC+Y    N   I L+L+VDD+L+ G     +  + +             +L  +F +TDLGE S  LGM++ R+R+  TL +SQ  Y  S+LERFGMS + PT TPG  ++ +    + TLLD   T++YQ +VGSL+++ Q  R+DI ++  Q AR M+ P++ H+VA K  LRYL G  D  I Y +G   L  F DS++       +ST+  +  LAN  + F S  Q + A ST EAEL+A A   K+  +  N+  ELG   +     V  DN   LH   N ++S+R+KHIA+RF  +R+ +   ++ I +V + D LADI TKH  +  F  L
Sbjct:  170 VPPGRKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFE-VKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAIKHLLSSGWKLGGIARQXGKLQKRFKMTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHL 649          
BLAST of mRNA_H-paniculata_contig23958.6481.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 357 bits (916), Expect = 3.140e-109
Identity = 195/483 (40.37%), Postives = 291/483 (60.25%), Query Frame = 0
Query:    1 MPSDHKVIGTRWVFKVKADGKFKARLVVQGWSQIHGIDCGSTFAPVCRLESQRLLLALATAKDWAVFALDVQVAFLNGELQESVYCKQAPGFEKTHPTTGQPYVMSLKKSIYGLRQSPNVWNHTIDNELRSMGFTPTISDPCIYSKGSNDTYIMLSLFVDDILITGPTDKLLMDVRNQLMNKFTITDLGEVSLILGMEVLRNRQEGTLQLSQYKYVLSVLERFGMSSANPTKTPGVKTDPTTTGEDSTLLDTAATKEYQAMVGSLIFLTQCTRFDICFSVTQAARFMSAPTQQHLVAVKRILRYLKGYPDMPIIYNRGQPPLKG-------FCDSSYTT-----RSTTGSMFFLANGLVPFSSRQQKIIADSTTEAELIALAACAKQGT-YLLNICRELGFQ-LDNFEVRSDNRGALHLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQLRSKVLTFG 469
            +P   K++GT++VFK K DG+FKARL V G  Q  G D  +  APVCR+ S R+  A+    +W ++ LDV  AFLN      VY + APG    +  T +P V  L++S+YGL QSP +WN T+D  L   G+  T SDPC+Y   S ++ ++ S++VDDILITG   +L+   + +L ++F +TD+GEV  ILG++V R+ ++GTL +SQ  YV ++LERFGM  ANP  TPG   + +T      +L     K YQ+M GS+++L QCTRFD+ ++  Q ++  S P Q ++ A K +LRYL+G P +PI+Y R Q  L         F DSS+       RSTTG +FFLA GL+ + ++ Q + A ST EAE+ AL+  A++   Y+ N   EL F+   +  + SD+ GAL +A N+ +S R+KH+A+R+  +R+ +   Q+ + H  S  QLADI TK+  +  F  +  ++  F 
Sbjct:  607 VPKGEKILGTKFVFKKKLDGRFKARLAVGGHRQEPGQDYRN--APVCRIGSIRMTCAIGCHNNWPIYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATEEPMVYKLERSLYGLLQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNSIVISSVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVPRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKREQIRLAAEQIRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFS 1087          
BLAST of mRNA_H-paniculata_contig23958.6481.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 364 bits (935), Expect = 3.370e-109
Identity = 198/475 (41.68%), Postives = 283/475 (59.58%), Query Frame = 0
Query:    1 MPSDHKVIGTRWVFKVKADGKFKARLVVQGWSQIHGIDCGSTFAPVCRLESQRLLLALATAKDWAVFALDVQVAFLNGELQESVYCKQAPGFEKTHPTTGQPYVMSLKKSIYGLRQSPNVWNHTIDNELRSMGFTPTISDPCIYSKGSNDTYIMLSLFVDDILITGPTDKLLMDVRNQLMNKFTITDLGEVSLILGMEVLRNRQEGTLQLSQYKYVLSVLERFGMSSANPTKTPGVKTDPTTTGEDSTLLDTAATKEYQAMVGSLIFLTQCTRFDICFSVTQAARFMSAPTQQHLVAVKRILRYLKGYPDMPIIYNRGQPPLKGFCDSSYTT-----RSTTGSMFFLANGLVPFSSRQQKIIADSTTEAELIALAACAKQGTYLLNICRELGF--QLDNFEVRSDNRGALHLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQLRSKVLTF 468
            +P + K I ++WVFK KADG FK R+V QGW+Q+ G+DCGST+APVCR++S R++  +    +     +DV  AFL  ++QE V+ +Q PGFE      G   VM L KS+YGL QSP  W +TID  L  +GF    SDPC+Y    N   I L+L+VDD+L+ G     +  V+ +L  +F +TDLGE SL+LGME+ R+R+  TL +SQ  Y  S+LERFG+S + PT TPG  ++ +    + TLLD   T++YQ +VGSL+++ Q  R+DI ++  Q AR M+ P++ H+VA K  LRYL G  D  I Y +G   L  F DS++       +ST+  +  LAN  + F S  Q + A ST EAEL+A A    +  +  N+  ELGF  +     V  DN   LH   N ++S+R+KHIA+RF  +R+ +   ++ I +V + D LADI TKH  +  F  L   +  F
Sbjct: 1191 VPPERKRIKSKWVFKRKADGTFKGRVVAQGWNQVPGLDCGSTYAPVCRIQSVRMVACITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFE-VKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLINNF 1664          
BLAST of mRNA_H-paniculata_contig23958.6481.1 vs. uniprot
Match: A0A6H5K9R3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R3_9PHAE)

HSP 1 Score: 349 bits (896), Expect = 3.100e-108
Identity = 196/470 (41.70%), Postives = 279/470 (59.36%), Query Frame = 0
Query:    1 MPSDHKVIGTRWVFKVKADGKFKARLVVQGWSQIHGIDCGSTFAPVCRLESQRLLLALATAKDWAVFALDVQVAFLNGELQESVYCKQAPGFEKTHPTTGQPYVMSLKKSIYGLRQSPNVWNHTIDNELRSMGFTPTISDPCIYSKGSNDTYIMLSLFVDDILITGPTDKLLMDVRNQLMNKFTITDLGEVSLILGMEVLRNRQEGTLQLSQYKYVLSVLERFGMSSANPTKTPGVKTDPTTTGEDSTLLDTAATKEYQAMVGSLIFLTQCTRFDICFSVTQAARFMSAPTQQHLVAVKRILRYLKGYPDMPIIYNRGQPPLKGFCDSSYTTRSTTGSMFFLANGLVPFSSRQQKIIADSTTEAELIALAACAKQGTYLLNICRELGFQ-LDNFEVRSDNRGALHLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILTKHCERVVFTQLRSKVLTFG 469
            +P   KV+GTR+VFK KAD +FK RLVVQG  Q  GID G  +A VCR+ S R+  A+A  + W V+ +DV VAFL   + + V+ K APG +   P TG   V  L++S+YGL QSP +W  TID  L  +GF PT SDPC+Y  GS DT ++L+L+V+DILI+G    L+ D++ +L ++F ITD+GEV LILGM+V R+ + GTL +SQ  YV S+LE  GM + NP                  LL  A +K YQ++ GSL++L QC R+D  ++V Q  R  S P + H  A K  LRY++G PD+ II+ RG+  +  F DSS+              G +P +   +K       E+EL A++  AK+  YL ++   L F+ L    + SD+ G L LAAN+ +S+R+KHIA+RF  L++ I+   + + HV +   LADI TKH +R  F  +  ++  FG
Sbjct:  420 VPKHEKVLGTRFVFKQKADERFKVRLVVQGHVQESGIDDGRRYARVCRIGSVRIFFAIACERGWPVWQMDVAVAFLQPTIDKDVWVKPAPGQDAKDPATGGIMVYKLERSLYGLAQSPVLWYDTIDEVLVVIGFRPTQSDPCVYIHGSGDTLVILTLYVNDILISGKDPDLVADLKKELQDRFEITDIGEVRLILGMKVTRSYENGTLVVSQKGYVKSILESLGMENCNPPA--------------DELLGAAESKLYQSITGSLLYLAQCKRYDQSYAVNQLTRACSKPARAHTTAAKHALRYIRGTPDLLIIFKRGRFRVAAFADSSF--------------GAIPDN---RKSTTGLQVESELQAISYGAKEAAYLSSLLMALKFENLKPISIYSDSSGTLSLAANTMFSSRTKHIALRFFVLQESIKPRHIAVHHVPTQAMLADIATKHLDRNKFNSIIHQIKDFG 858          
BLAST of mRNA_H-paniculata_contig23958.6481.1 vs. uniprot
Match: A0A6H5JDU8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDU8_9PHAE)

HSP 1 Score: 333 bits (854), Expect = 2.260e-105
Identity = 176/414 (42.51%), Postives = 259/414 (62.56%), Query Frame = 0
Query:    1 MPSDHKVIGTRWVFKVKADGKFKARLVVQGWSQIHGIDCGSTFAPVCRLESQRLLLALATAKDWAVFALDVQVAFLNGELQESVYCKQAPGFEKTHPTTGQPYVMSLKKSIYGLRQSPNVWNHTIDNELRSMGFTPTISDPCIYSKGSNDTYIMLSLFVDDILITGPTDKLLMDVRNQLMNKFTITDLGEVSLILGMEVLRNRQEGTLQLSQYKYVLSVLERFGMSSANPTKTPGVKTDPTTTGEDSTLLDTAATKEYQAMVGSLIFLTQCTRFDICFSVTQAARFMSAPTQQHLVAVKRILRYLKGYPDMPIIYNRGQPPLKGFCDSSYTT-----RSTTGSMFFLANGLVPFSSRQQKIIADSTTEAELIALAACAKQGTYLLNICRELGFQLDNF-EVRSDNRGALHLAAN 408
            +P   +++GT++VFK K DG+FKA LVV G  Q  G D GS++APVCR+ S R+   +    +W ++ LDV VAFLN      VY + APG    +  TG+P V  L++S+YGL QSP +WN T++  L+  G+  T  DPC+Y   S +  ++L+++VDDILITG  D+ L+D + +L ++F +TD+GEV  ILG++V R+ ++GTL +SQ  YV ++LERFGM  ANP  T G   + +T      +L     K YQ+M  S+++L QCTRFD+ ++  Q ++  S P Q +L A K +LRYL+G P +PI+Y RGQ  L    DSS+       RSTTG +FFLA GL+ + ++ Q + A ST EAE+ AL+  A++  Y+ N   E  F+   +  + SD+ GAL +A N
Sbjct:  119 VPKGEEILGTKFVFKKKLDGRFKAHLVVGGHRQEPGQDYGSSYAPVCRIGSIRMTCTIGCHNNWPIYQLDVVVAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLNESLKVFGWKRTQYDPCVYMYTSGNIIVILTVYVDDILITGG-DQQLVDQKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEYYVNTLLERFGMQEANPVSTLGYGAEISTNQPQDQILGPTDKKIYQSMTRSILYLAQCTRFDLSYAALQLSKACSNPAQVNLTAAKHVLRYLRGNPVLPIVYKRGQFWLAASTDSSFGANLDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSFSAREAIYISNFMTEFNFKTFGWVPINSDSTGALTVAGN 531          
BLAST of mRNA_H-paniculata_contig23958.6481.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 345 bits (885), Expect = 1.080e-102
Identity = 181/414 (43.72%), Postives = 261/414 (63.04%), Query Frame = 0
Query:   20 GKFKARLVVQGWSQIHGIDCGSTFAPVCRLESQRLLLALATAKDWAVFALDVQVAFLNGELQESVYCKQAPGFEKTHPTTGQPYVMSLKKSIYGLRQSPNVWNHTIDNELRSMGFTPTISDPCIYSKGSNDTYIMLSLFVDDILITGPTDKLLMDVRNQLMNKFTITDLGEVSLILGMEVLRNRQEGTLQLSQYKYVLSVLERFGMSSANPTKTPGVKTDPTTTGEDSTLLDTAATKEYQAMVGSLIFLTQCTRFDICFSVTQAARFMSAPTQQHLVAVKRILRYLKGYPDMPIIYNRGQPPLKGFCDSSYTT-----RSTTGSMFFLANGLVPFSSRQQKIIADSTTEAELIALAACAKQGTYLLNICRELGFQ-LDNFEVRSDNRGALHLAANSNYSNRSKHIAIRFAALRD 427
            G+FKARLV  G  Q  G   G  +APV RL S R+L A+A    W V+ LDV  AFLN      VY + APG E+  PTTG+  V  L+KS+YGL QSP++WN  I++ L   G+  T SDPC+Y   S D   +L+++VDDILITG   +++   + +LM+ F +TD+GEV  ++G+EV R+ + GTL +SQ  Y   +L+R+GM  ANP  TPG   + +T      LL     + +QA+ GSL++L QCTR+D+ ++V Q  R  + P Q H+ A K +LRYL+G PD+PI+Y +GQ  L  F DSS+       RSTTG +FFL  GL+ + ++ Q + A +T EAEL AL+  A++  Y+ N   E+GF+   +  + SD+ GAL +A+N+ +S+R+KHIA+RF  LR+
Sbjct: 1057 GRFKARLVAGGHRQRAGRHFGRNYAPVTRLGSIRMLFAIACEHGWEVYQLDVVAAFLNAYTDRDVYVRPAPGDEERDPTTGEMMVYKLEKSLYGLSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSSKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGAELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGQFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRN 1470          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23958.6481.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQD0_9PHAE1.080e-12341.47Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF46_9PHAE4.740e-12342.83Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF89_9PHAE4.310e-12241.47Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KE92_9PHAE1.060e-12141.68Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JME8_9PHAE1.110e-10940.54Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JJR8_9PHAE3.140e-10940.37Integrase catalytic domain-containing protein n=11... [more]
A0A6H5KJH6_9PHAE3.370e-10941.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9R3_9PHAE3.100e-10841.70Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JDU8_9PHAE2.260e-10542.51Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KHG5_9PHAE1.080e-10243.72Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..234
e-value: 1.8E-69
score: 234.1
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 10..422
NoneNo IPR availablePANTHERPTHR11439:SF242coord: 10..422
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 23..422

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23958contigH-paniculata_contig23958:1490..2902 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23958.6481.1mRNA_H-paniculata_contig23958.6481.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23958 1490..2902 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23958.6481.1 ID=prot_H-paniculata_contig23958.6481.1|Name=mRNA_H-paniculata_contig23958.6481.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=471bp
MPSDHKVIGTRWVFKVKADGKFKARLVVQGWSQIHGIDCGSTFAPVCRLE
SQRLLLALATAKDWAVFALDVQVAFLNGELQESVYCKQAPGFEKTHPTTG
QPYVMSLKKSIYGLRQSPNVWNHTIDNELRSMGFTPTISDPCIYSKGSND
TYIMLSLFVDDILITGPTDKLLMDVRNQLMNKFTITDLGEVSLILGMEVL
RNRQEGTLQLSQYKYVLSVLERFGMSSANPTKTPGVKTDPTTTGEDSTLL
DTAATKEYQAMVGSLIFLTQCTRFDICFSVTQAARFMSAPTQQHLVAVKR
ILRYLKGYPDMPIIYNRGQPPLKGFCDSSYTTRSTTGSMFFLANGLVPFS
SRQQKIIADSTTEAELIALAACAKQGTYLLNICRELGFQLDNFEVRSDNR
GALHLAANSNYSNRSKHIAIRFAALRDWIRSNQLVIDHVASADQLADILT
KHCERVVFTQLRSKVLTFGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like