prot_H-paniculata_contig23913.6467.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig23913.6467.1
Unique Nameprot_H-paniculata_contig23913.6467.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length164
Homology
BLAST of mRNA_H-paniculata_contig23913.6467.1 vs. uniprot
Match: D7FSD9_ECTSI (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSD9_ECTSI)

HSP 1 Score: 291 bits (744), Expect = 6.400e-99
Identity = 146/162 (90.12%), Postives = 150/162 (92.59%), Query Frame = 0
Query:    1 MLIGHGFDIHRLVAGKELVIGGVKIPYELGADAHSDGDVIYHSVVDAILGKWPCALGLPDIGQLFPDNDPEWSGADSSVFMEEAYRRMEARGFRVGNVDVTLILQKPKVMDIKPQMRANIVRLLDTSLARVNVKARTHEKVDAVGEGRAMACHVVVLLEKCP 162
            MLIGHGFDIHRLV GKELVIGGV IPYELGADAHSDGDVIYHSVVDAILG    ALGLPDIGQLFPDNDP+WSGADSS+FMEEAYRRM+ RGFRVGNVDVTLILQKPKVMDIKP MR NIVRLL TSL RVNVKARTHEKVD+VGEGRAMACHVVVLLEK P
Sbjct:   11 MLIGHGFDIHRLVEGKELVIGGVNIPYELGADAHSDGDVIYHSVVDAILG----ALGLPDIGQLFPDNDPDWSGADSSIFMEEAYRRMDERGFRVGNVDVTLILQKPKVMDIKPLMRDNIVRLLRTSLGRVNVKARTHEKVDSVGEGRAMACHVVVLLEKVP 168          
BLAST of mRNA_H-paniculata_contig23913.6467.1 vs. uniprot
Match: A0A7S2XZX5_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZX5_9STRA)

HSP 1 Score: 255 bits (651), Expect = 6.920e-84
Identity = 127/159 (79.87%), Postives = 138/159 (86.79%), Query Frame = 0
Query:    2 LIGHGFDIHRLVAGKELVIGGVKIPYELGADAHSDGDVIYHSVVDAILGKWPCALGLPDIGQLFPDNDPEWSGADSSVFMEEAYRRMEARGFRVGNVDVTLILQKPKVMDIKPQMRANIVRLLDTSLARVNVKARTHEKVDAVGEGRAMACHVVVLLEK 160
            L+GHGFDIHRL  G  LVIGGV IPYELGA+AHSDGDVIYHSVVDAILG    AL LPDIGQLFPDNDP W GADSSVFMEEAYRRM+  G+ +GNVDVTLILQKPKV DIKP M+ NIVRLL T+ ++VNVKARTHEKVD+VGEGR+MACHVVVLL K
Sbjct:   72 LVGHGFDIHRLAPGLPLVIGGVTIPYELGAEAHSDGDVIYHSVVDAILG----ALTLPDIGQLFPDNDPRWKGADSSVFMEEAYRRMDEAGYTIGNVDVTLILQKPKVKDIKPAMKENIVRLLRTTPSQVNVKARTHEKVDSVGEGRSMACHVVVLLMK 226          
BLAST of mRNA_H-paniculata_contig23913.6467.1 vs. uniprot
Match: A0A7R9U3H3_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3H3_9STRA)

HSP 1 Score: 251 bits (641), Expect = 1.030e-82
Identity = 122/160 (76.25%), Postives = 139/160 (86.88%), Query Frame = 0
Query:    3 IGHGFDIHRLVAGKELVIGGVKIPYELGADAHSDGDVIYHSVVDAILGKWPCALGLPDIGQLFPDNDPEWSGADSSVFMEEAYRRMEARGFRVGNVDVTLILQKPKVMDIKPQMRANIVRLLDTSLARVNVKARTHEKVDAVGEGRAMACHVVVLLEKCP 162
            IGHGFDIHR+  GK+LVIGGV I +ELG +AHSDGDVIYHSVVDAILG    AL LPDIGQLFPDNDPEWSGADSS+FM+EAY+RM+ARG+R+GNVDVTLILQKPKV D KP M+ NIV LL T+  RVNVKARTHEKVD+VGE RA++CHVV +LE+ P
Sbjct:   48 IGHGFDIHRMAPGKKLVIGGVTIDFELGVEAHSDGDVIYHSVVDAILG----ALTLPDIGQLFPDNDPEWSGADSSIFMKEAYKRMDARGYRIGNVDVTLILQKPKVKDFKPLMKDNIVELLHTTPDRVNVKARTHEKVDSVGESRALSCHVVTILERKP 203          
BLAST of mRNA_H-paniculata_contig23913.6467.1 vs. uniprot
Match: A0A835Z8X8_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8X8_9STRA)

HSP 1 Score: 238 bits (608), Expect = 2.760e-78
Identity = 117/156 (75.00%), Postives = 130/156 (83.33%), Query Frame = 0
Query:    3 IGHGFDIHRLVAGKELVIGGVKIPYELGADAHSDGDVIYHSVVDAILGKWPCALGLPDIGQLFPDNDPEWSGADSSVFMEEAYRRMEARGFRVGNVDVTLILQKPKVMDIKPQMRANIVRLLDTSLARVNVKARTHEKVDAVGEGRAMACHVVVLL 158
            IGHG+DIHRL  GK+LVIGGV IP+E GA+AHSDGDVIYHSVVDAILG    AL +PDIGQLFPDNDP+WSG+DSS+FMEEAYRRM  RG+ +GNVDVTLILQ+PKV DIKP M  NI RLL     RVNVKARTHE VD+VGE RAM CHVV+ L
Sbjct:    5 IGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILG----ALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTL 156          
BLAST of mRNA_H-paniculata_contig23913.6467.1 vs. uniprot
Match: A0A7S2WW46_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW46_9STRA)

HSP 1 Score: 239 bits (610), Expect = 9.440e-78
Identity = 118/158 (74.68%), Postives = 131/158 (82.91%), Query Frame = 0
Query:    3 IGHGFDIHRLVAGKELVIGGVKIPYELGADAHSDGDVIYHSVVDAILGKWPCALGLPDIGQLFPDNDPEWSGADSSVFMEEAYRRMEARGFRVGNVDVTLILQKPKVMDIKPQMRANIVRLLDTSLARVNVKARTHEKVDAVGEGRAMACHVVVLLEK 160
            IGHG+DIHRL  G  LVIGGV I YELG +AHSDGDV++HSVVDAI G    ALGLPDIGQ FPD DP W GA S VFMEEAY +M ARG+ +GNVDVTLILQKPKVMDIKP+M+ NIVRLL TS +RVNVKARTHEKVD+VGE RA+ CHVV+ LEK
Sbjct:   65 IGHGYDIHRLAPGLPLVIGGVDIDYELGTEAHSDGDVVFHSVVDAIFG----ALGLPDIGQFFPDTDPRWKGASSDVFMEEAYNQMVARGYHIGNVDVTLILQKPKVMDIKPKMKDNIVRLLRTSESRVNVKARTHEKVDSVGECRALECHVVLTLEK 218          
BLAST of mRNA_H-paniculata_contig23913.6467.1 vs. uniprot
Match: A0A7S0SRS3_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRS3_9STRA)

HSP 1 Score: 238 bits (607), Expect = 1.590e-77
Identity = 114/158 (72.15%), Postives = 131/158 (82.91%), Query Frame = 0
Query:    3 IGHGFDIHRLVAGKELVIGGVKIPYELGADAHSDGDVIYHSVVDAILGKWPCALGLPDIGQLFPDNDPEWSGADSSVFMEEAYRRMEARGFRVGNVDVTLILQKPKVMDIKPQMRANIVRLLDTSLARVNVKARTHEKVDAVGEGRAMACHVVVLLEK 160
            IGHGFDIHRL+ G +LVIGGV IPY LGADAHSDGD +YH VVDAILG    AL LPDIGQ+FPDNDP+W GADSS+FM EAY RM  RG+R+ N+DVTLILQ PKV DIKP M+ NIV+LL T+  RVN+KARTHEKVD++GE ++ ACH VVLLEK
Sbjct:   49 IGHGFDIHRLIEGTKLVIGGVTIPYHLGADAHSDGDALYHCVVDAILG----ALNLPDIGQIFPDNDPKWKGADSSIFMIEAYNRMIERGYRISNLDVTLILQSPKVKDIKPSMKENIVKLLHTADNRVNIKARTHEKVDSIGESKSYACHAVVLLEK 202          
BLAST of mRNA_H-paniculata_contig23913.6467.1 vs. uniprot
Match: A0A7S0GXU7_9EUKA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GXU7_9EUKA)

HSP 1 Score: 229 bits (585), Expect = 5.770e-74
Identity = 112/160 (70.00%), Postives = 131/160 (81.88%), Query Frame = 0
Query:    1 MLIGHGFDIHRLVAGKELVIGGVKIPYELGADAHSDGDVIYHSVVDAILGKWPCALGLPDIGQLFPDNDPEWSGADSSVFMEEAYRRMEARGFRVGNVDVTLILQKPKVMDIKPQMRANIVRLLDTSLARVNVKARTHEKVDAVGEGRAMACHVVVLLEK 160
            M IGHG+DIHRL  G  L IGGV IP+E G  AHSDGDV+YHS+ DAILG    A+G+PDIGQLFPDNDP+W GA S  FM EAYR M+ RG+++GNVDVTLILQKPKV DIKP+M+ NIV+LL+T  +RVN+KARTHE VD+VGE RA+ACH VVLLEK
Sbjct:   63 MRIGHGWDIHRLEDGLTLTIGGVVIPFEKGTVAHSDGDVLYHSLTDAILG----AIGMPDIGQLFPDNDPQWKGAASHQFMTEAYRLMKERGYQIGNVDVTLILQKPKVKDIKPEMKENIVKLLNTDASRVNIKARTHENVDSVGEVRALACHSVVLLEK 218          
BLAST of mRNA_H-paniculata_contig23913.6467.1 vs. uniprot
Match: K8YUB0_NANGC (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YUB0_NANGC)

HSP 1 Score: 229 bits (583), Expect = 2.370e-73
Identity = 113/158 (71.52%), Postives = 128/158 (81.01%), Query Frame = 0
Query:    3 IGHGFDIHRLVAGKELVIGGVKIPYELGADAHSDGDVIYHSVVDAILGKWPCALGLPDIGQLFPDNDPEWSGADSSVFMEEAYRRMEARGFRVGNVDVTLILQKPKVMDIKPQMRANIVRLLDTSLARVNVKARTHEKVDAVGEGRAMACHVVVLLEK 160
            IGHGFDIHRL AG  LVIGGVKI +E G+ AHSDGD +YHSV DAILG    A+GLPDIGQLFPD DP+W GADS+ FM EA R M  RG+R+GNVDVTLILQKPKV DIKPQM+AN+V LL T  +RVN+KARTHE VD+VGE R+   HVV+LLEK
Sbjct:   87 IGHGFDIHRLEAGLPLVIGGVKIEFEKGSAAHSDGDALYHSVTDAILG----AIGLPDIGQLFPDTDPKWKGADSAQFMREARRLMTLRGYRIGNVDVTLILQKPKVKDIKPQMKANLVELLGTEESRVNIKARTHEHVDSVGESRSWVVHVVILLEK 240          
BLAST of mRNA_H-paniculata_contig23913.6467.1 vs. uniprot
Match: A0A0G4H9P7_9ALVE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H9P7_9ALVE)

HSP 1 Score: 217 bits (553), Expect = 4.940e-69
Identity = 104/160 (65.00%), Postives = 123/160 (76.88%), Query Frame = 0
Query:    3 IGHGFDIHRLVAGKELVIGGVKIPYELGADAHSDGDVIYHSVVDAILGKWPCALGLPDIGQLFPDNDPEWSGADSSVFMEEAYRRMEARGFRVGNVDVTLILQKPKVMDIKPQMRANIVRLLDTSLARVNVKARTHEKVDAVGEGRAMACHVVVLLEKCP 162
            +GHG+DIHRL  G  L IGG+ IPYE G +AHSDGDV++HS+ DAI G    AL LPDIGQ FPD DP W GA S VFMEEA+R+M+ RG+R+GN DVTLIL++PKV D KP+M   I  LL    +RVNVKARTHEKVD+VGE RA+ CHVVV+LEK P
Sbjct:   69 VGHGYDIHRLAPGLTLTIGGIDIPYEKGTEAHSDGDVVFHSLCDAIFG----ALSLPDIGQQFPDTDPRWKGAASCVFMEEAFRQMDERGYRIGNADVTLILERPKVKDFKPKMVDRICELLRAPHSRVNVKARTHEKVDSVGESRALECHVVVVLEKKP 224          
BLAST of mRNA_H-paniculata_contig23913.6467.1 vs. uniprot
Match: A0A6V3M8V7_9EUKA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3M8V7_9EUKA)

HSP 1 Score: 218 bits (556), Expect = 5.750e-69
Identity = 108/160 (67.50%), Postives = 128/160 (80.00%), Query Frame = 0
Query:    3 IGHGFDIHRLV--AGKELVIGGVKIPYELGADAHSDGDVIYHSVVDAILGKWPCALGLPDIGQLFPDNDPEWSGADSSVFMEEAYRRMEARGFRVGNVDVTLILQKPKVMDIKPQMRANIVRLLDTSLARVNVKARTHEKVDAVGEGRAMACHVVVLLEK 160
            IGHG+DIHRL   +G  L IGGV IP+E G  AHSDGDV+YHS+ DAILG    A+G+PDIGQLFPD DP W GA S VF+ E++R M  RG+R+GNVD+TLILQKPKV DIKP+M  NIV+LL T  +RVN+KARTHEKVD+VGE RA+ACH VVLLE+
Sbjct:  106 IGHGWDIHRLEEDSGAPLTIGGVVIPFEKGIVAHSDGDVLYHSLTDAILG----AIGMPDIGQLFPDTDPRWKGAASHVFLTESHRLMTERGYRIGNVDITLILQKPKVKDIKPEMAENIVKLLHTHPSRVNIKARTHEKVDSVGEVRALACHAVVLLER 261          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig23913.6467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSD9_ECTSI6.400e-9990.122-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7S2XZX5_9STRA6.920e-8479.872-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7R9U3H3_9STRA1.030e-8276.252-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A835Z8X8_9STRA2.760e-7875.002-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7S2WW46_9STRA9.440e-7874.682-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7S0SRS3_9STRA1.590e-7772.152-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7S0GXU7_9EUKA5.770e-7470.002-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
K8YUB0_NANGC2.370e-7371.522-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A0G4H9P7_9ALVE4.940e-6965.002-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A6V3M8V7_9EUKA5.750e-6967.502-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthasePFAMPF02542YgbBcoord: 1..159
e-value: 4.8E-61
score: 205.6
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseTIGRFAMTIGR00151TIGR00151coord: 3..160
e-value: 3.3E-53
score: 177.9
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseHAMAPMF_00107IspFcoord: 1..160
score: 29.446
IPR0365712-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamilyGENE3D3.30.1330.50coord: 1..162
e-value: 4.6E-64
score: 217.4
IPR0365712-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamilySUPERFAMILY69765IpsF-likecoord: 2..160
NoneNo IPR availablePANTHERPTHR43181FAMILY NOT NAMEDcoord: 2..160
IPR0205552-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved sitePROSITEPS01350ISPFcoord: 35..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig23913contigH-paniculata_contig23913:604..2689 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig23913.6467.1mRNA_H-paniculata_contig23913.6467.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig23913 300..2701 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig23913.6467.1 ID=prot_H-paniculata_contig23913.6467.1|Name=mRNA_H-paniculata_contig23913.6467.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=164bp
MLIGHGFDIHRLVAGKELVIGGVKIPYELGADAHSDGDVIYHSVVDAILG
KWPCALGLPDIGQLFPDNDPEWSGADSSVFMEEAYRRMEARGFRVGNVDV
TLILQKPKVMDIKPQMRANIVRLLDTSLARVNVKARTHEKVDAVGEGRAM
ACHVVVLLEKCPN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003526MECDP_synthase
IPR036571MECDP_synthase_sf
IPR020555MECDP_synthase_CS