prot_H-paniculata_contig239.6463.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig239.6463.1
Unique Nameprot_H-paniculata_contig239.6463.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length127
Homology
BLAST of mRNA_H-paniculata_contig239.6463.1 vs. uniprot
Match: D7FHL9_ECTSI (Mitochondrial import inner membrane translocase subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL9_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 7.640e-35
Identity = 73/125 (58.40%), Postives = 80/125 (64.00%), Query Frame = 0
Query:    1 MSWWGGGKSKEPEPISXXXXXXXXXXXXXXXXXXXXXGGXXXXXXXXXXXAMAELQAAIQEEQQRAALQAIVSRLTDLAFTKCVHKPGSSLSSSEQSCINATVLKYFDTSEFVMGRLMKSQGGGG 125
            MSW+ G   KEPEP S                     G             M +LQAA+Q EQQ+A +QAIVSRLTDLAFTKC+ KP SSLSSSEQSCINATVLKYFDTSEFV+GRLMKSQ GGG
Sbjct:    1 MSWFRG--KKEPEPESTPEPTFSSDTSAFEGSTNFASGPPSRGGGGATSAGMGDLQAAMQIEQQKAQMQAIVSRLTDLAFTKCIQKPSSSLSSSEQSCINATVLKYFDTSEFVLGRLMKSQQGGG 123          
BLAST of mRNA_H-paniculata_contig239.6463.1 vs. uniprot
Match: A0A6S9DQ42_HETAK (Mitochondrial import inner membrane translocase subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9DQ42_HETAK)

HSP 1 Score: 90.1 bits (222), Expect = 9.140e-21
Identity = 42/68 (61.76%), Postives = 56/68 (82.35%), Query Frame = 0
Query:   54 ELQAAIQEEQQRAALQAIVSRLTDLAFTKCVHKPGSSLSSSEQSCINATVLKYFDTSEFVMGRLMKSQ 121
            +LQ  +Q+EQQRA +Q +V++LT++A  KCV KP SSLSSSEQ+CI++ V KY DTSEFV+GR+MK Q
Sbjct:   55 QLQELVQQEQQRALIQTVVAKLTEIAHDKCVGKPSSSLSSSEQACIHSVVSKYLDTSEFVLGRMMKQQ 122          
BLAST of mRNA_H-paniculata_contig239.6463.1 vs. uniprot
Match: K8YZ78_NANGC (Mitochondrial import inner membrane translocase subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YZ78_NANGC)

HSP 1 Score: 86.7 bits (213), Expect = 2.580e-19
Identity = 42/75 (56.00%), Postives = 57/75 (76.00%), Query Frame = 0
Query:   54 ELQAAIQEEQQRAALQAIVSRLTDLAFTKCVHKPGSSLSSSEQSCINATVLKYFDTSEFVMGRLMKS----QGGG 124
            +L+  +  EQQ+A +Q++++RLT++AF  C+ KP SSLSS EQSCI ATV KY DTSEFV+GR+ +S    QGGG
Sbjct:   56 QLEELVMAEQQKALVQSVIARLTEMAFETCITKPASSLSSGEQSCIQATVAKYLDTSEFVLGRVQRSAQRGQGGG 130          
BLAST of mRNA_H-paniculata_contig239.6463.1 vs. uniprot
Match: W7TJX5_9STRA (Mitochondrial protein translocase family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJX5_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 6.340e-19
Identity = 42/75 (56.00%), Postives = 57/75 (76.00%), Query Frame = 0
Query:   54 ELQAAIQEEQQRAALQAIVSRLTDLAFTKCVHKPGSSLSSSEQSCINATVLKYFDTSEFVMGRLMKS----QGGG 124
            +L+  +  EQQ+A +Q++++RLT++AF  C+ KP SSLSS EQSCI ATV KY DTSEFV+GR+ +S    QGGG
Sbjct:   92 QLEELVMAEQQKALVQSVIARLTEMAFETCITKPASSLSSGEQSCIQATVAKYLDTSEFVLGRVQRSAQRGQGGG 166          
BLAST of mRNA_H-paniculata_contig239.6463.1 vs. uniprot
Match: A0A2R5GV90_9STRA (Mitochondrial import inner membrane translocase subunit n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GV90_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.310e-13
Identity = 32/72 (44.44%), Postives = 52/72 (72.22%), Query Frame = 0
Query:   51 AMAELQAAIQEEQQRAALQAIVSRLTDLAFTKCVHKPGSSLSSSEQSCINATVLKYFDTSEFVMGRLMKSQG 122
            + A L+ A+++EQQRA +QA +++L+++ +  CV +P + LSSSEQ+CI+    +Y D S F+MGR+ K QG
Sbjct:   58 SQAALRQALEQEQQRAVVQAAIAKLSEMCWDTCVGRPDAKLSSSEQTCISNCAERYLDVSMFIMGRMSKGQG 129          
BLAST of mRNA_H-paniculata_contig239.6463.1 vs. uniprot
Match: A0A7S4M3J4_9EUKA (Mitochondrial import inner membrane translocase subunit n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4M3J4_9EUKA)

HSP 1 Score: 70.5 bits (171), Expect = 2.370e-13
Identity = 32/74 (43.24%), Postives = 50/74 (67.57%), Query Frame = 0
Query:   52 MAELQAAIQEEQQRAALQAIVSRLTDLAFTKCVHKPGSSLSSSEQSCINATVLKYFDTSEFVMGRLMKSQGGGG 125
            M ELQ+ ++ E Q+A +QA +S+LT+  F KC+ KPG+ L ++E +CI     +Y D+S FV+ R+M  +G GG
Sbjct:   26 MKELQSFMETENQKAVIQAAISKLTETCFDKCISKPGAKLDATEANCIANCAGRYLDSSVFVVNRMMAKRGAGG 99          
BLAST of mRNA_H-paniculata_contig239.6463.1 vs. uniprot
Match: A0A7J7IIB5_9RHOD (Mitochondrial import inner membrane translocase subunit n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IIB5_9RHOD)

HSP 1 Score: 70.9 bits (172), Expect = 2.450e-13
Identity = 32/71 (45.07%), Postives = 50/71 (70.42%), Query Frame = 0
Query:   51 AMAELQAAIQEEQQRAALQAIVSRLTDLAFTKCVHKPGSSLSSSEQSCINATVLKYFDTSEFVMGRLMKSQ 121
            A  E    +++E Q+AA+QA++++LT+L + KCV KPGS LSSSE  C++    ++ DTS F+M R++K Q
Sbjct:   45 AQQEFTNFLEQENQKAAVQAVIAKLTELCWDKCVQKPGSKLSSSEAECLSNCAERFLDTSLFIMQRMVKKQ 115          
BLAST of mRNA_H-paniculata_contig239.6463.1 vs. uniprot
Match: A0A8J2T0W3_9STRA (Mitochondrial import inner membrane translocase subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T0W3_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 4.250e-13
Identity = 35/68 (51.47%), Postives = 51/68 (75.00%), Query Frame = 0
Query:   53 AELQAAIQEEQQRAALQAIVSRLTDLAFTKCVHK-PGSSLSSSEQSCINATVLKYFDTSEFVMGRLMK 119
            AELQ A+  EQQRA +Q ++++LT+++F  C+ K P S+LS+ E++CI+  V KY DTSEFV+GR  K
Sbjct:   62 AELQRAVVAEQQRALVQQVIAKLTEVSFDTCLQKKPDSTLSAGERACIHTVVGKYLDTSEFVLGRSTK 129          
BLAST of mRNA_H-paniculata_contig239.6463.1 vs. uniprot
Match: M1VC70_CYAM1 (Mitochondrial import inner membrane translocase subunit n=2 Tax=cellular organisms TaxID=131567 RepID=M1VC70_CYAM1)

HSP 1 Score: 69.3 bits (168), Expect = 5.470e-13
Identity = 31/71 (43.66%), Postives = 49/71 (69.01%), Query Frame = 0
Query:   51 AMAELQAAIQEEQQRAALQAIVSRLTDLAFTKCVHKPGSSLSSSEQSCINATVLKYFDTSEFVMGRLMKSQ 121
            A  E    +++E Q+AA+QA++++LT+L + KCV KPGS LSSSE  C++    ++ D S F+M R++K Q
Sbjct:   22 AQQEFSNFLEQENQKAAVQAVIAKLTELCWDKCVQKPGSKLSSSETECLSNCAERFLDASLFIMQRMVKKQ 92          
BLAST of mRNA_H-paniculata_contig239.6463.1 vs. uniprot
Match: M2Y3A9_GALSU (Mitochondrial import inner membrane translocase subunit n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y3A9_GALSU)

HSP 1 Score: 68.6 bits (166), Expect = 7.260e-13
Identity = 32/69 (46.38%), Postives = 46/69 (66.67%), Query Frame = 0
Query:   53 AELQAAIQEEQQRAALQAIVSRLTDLAFTKCVHKPGSSLSSSEQSCINATVLKYFDTSEFVMGRLMKSQ 121
            +E Q  I++E Q+AA+QA +S+LT+  + KCV KPGS L  +E  CI     ++ D+S F+M RLMK Q
Sbjct:    8 SEFQTFIEQENQKAAIQAAISKLTETCWDKCVGKPGSKLDRAESECIANCAERFLDSSSFIMQRLMKKQ 76          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig239.6463.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHL9_ECTSI7.640e-3558.40Mitochondrial import inner membrane translocase su... [more]
A0A6S9DQ42_HETAK9.140e-2161.76Mitochondrial import inner membrane translocase su... [more]
K8YZ78_NANGC2.580e-1956.00Mitochondrial import inner membrane translocase su... [more]
W7TJX5_9STRA6.340e-1956.00Mitochondrial protein translocase family n=1 Tax=N... [more]
A0A2R5GV90_9STRA1.310e-1344.44Mitochondrial import inner membrane translocase su... [more]
A0A7S4M3J4_9EUKA2.370e-1343.24Mitochondrial import inner membrane translocase su... [more]
A0A7J7IIB5_9RHOD2.450e-1345.07Mitochondrial import inner membrane translocase su... [more]
A0A8J2T0W3_9STRA4.250e-1351.47Mitochondrial import inner membrane translocase su... [more]
M1VC70_CYAM15.470e-1343.66Mitochondrial import inner membrane translocase su... [more]
M2Y3A9_GALSU7.260e-1346.38Mitochondrial import inner membrane translocase su... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004217Tim10-likePFAMPF02953zf-Tim10_DDPcoord: 59..117
e-value: 3.9E-18
score: 64.8
IPR035427Tim10-like domain superfamilyGENE3D1.10.287.810coord: 59..121
e-value: 1.4E-15
score: 58.5
IPR035427Tim10-like domain superfamilySUPERFAMILY144122Tim10-likecoord: 65..121
IPR039238Mitochondrial import inner membrane translocase subunit Tim8/13PANTHERPTHR19338TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 13 HOMOLOGcoord: 52..119
NoneNo IPR availablePANTHERPTHR19338:SF4TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 8Acoord: 52..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig239contigH-paniculata_contig239:37813..42726 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig239.6463.1mRNA_H-paniculata_contig239.6463.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig239 37755..43400 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig239.6463.1 ID=prot_H-paniculata_contig239.6463.1|Name=mRNA_H-paniculata_contig239.6463.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=127bp
MSWWGGGKSKEPEPISEPEPSFASNSSFESGTNFASGGGGGGGGMGGSGG
AMAELQAAIQEEQQRAALQAIVSRLTDLAFTKCVHKPGSSLSSSEQSCIN
ATVLKYFDTSEFVMGRLMKSQGGGGT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004217Tim10-like
IPR035427Tim10-like_dom_sf
IPR039238Tim8/13