mRNA_H-paniculata_contig239.6461.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig239.6461.1 vs. uniprot
Match: D7FHM1_ECTSI (TiTiN family member (Ttn-1) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM1_ECTSI) HSP 1 Score: 544 bits (1402), Expect = 2.330e-169 Identity = 287/510 (56.27%), Postives = 353/510 (69.22%), Query Frame = 2
Query: 530 PALAMSTMARLASAEHGITSMGNTVVIELGAWKIRVGMVESGGGQ-ECKSFFDEFPCSVARPRREAADLDELVNGASSFSAPMYSKFRESGVFVGGDAWYCCLDHPDSGLRSNLTLSCPLDRGRVRLRDGGVKSDDTERLIDHAFGLLKQDPTATPTLVTYKPTAAPEEVWEVASILLENHRVPAVRLVNEAQLAALAAGVTTGIVVDIGESGVYVTPIFAGSPVAKAVQSVPCGGGDLTRYLDYMLISRTNEQFNQMVDRRRLEYTRKLKEEHCFVPLDFQDEAERCGNFRRKTMRVFEGAQVSPKLSAYEACSSQQFNDDKESSADNPVTVSFTQKAGTQLDIKIGRERFHAPELLFQPELWAEMESEDGLDDLVVAAVAGLDADVRAQMLGDVVLVGGSAALPGLLERLEQDLMAIVPEHLCEKVHVRVLGDDVRRHS----------------------NKLSRGSATAVTVGAEALLRAEEKDQCA------WIKSTEWEDNSDV 1972
P +S M RLA A+HG+ GNTVV+ELGAW++R G+V G + + S+FD+FPC VARP RE ADLDELVNGASS +APMYSKFR++GVFVGGDAWYCCLDHP LRS L LSCP+ R RD +DTERL DHA+GLLKQD + +PTL+TYKPTA +EV +AS+LLE HRVPA+R+VNEAQLAALA GV G++VDIGESGV VTPIF G PV AV+S CGGGD+T++LDYML+SRTNE FNQM DRRRLEYTR++KEE C+VPLDF E E G F+RK MRV +GAQ SP LS YEAC S+ F D+ + + T +FT K+G++LD+KIGRERFHAPE+LF P LW E L V+ A+A LD+D +A ML D+V+VGGSA + GL +RLE+DL A++PE + E+V VRV D H N+ SRG +AVTVGAE LL A WI + +W + +V
Sbjct: 1232 PLSCLSPMVRLAPADHGLGREGNTVVLELGAWRVRAGVVTPSGEEGKSSSYFDDFPCCVARPSREGADLDELVNGASSLAAPMYSKFRDTGVFVGGDAWYCCLDHPSIALRSKLRLSCPMRR-----RDQPPSREDTERLADHAYGLLKQDSSLSPTLLTYKPTATVDEVLALASVLLEVHRVPAIRMVNEAQLAALAVGVKVGVIVDIGESGVSVTPIFDGFPVPPAVRSECCGGGDVTKFLDYMLLSRTNEHFNQMTDRRRLEYTREMKEEQCYVPLDFALEVEEYGAFKRKAMRVCKGAQASPMLSGYEACDSRDFIDETDKDEEVTKTKTFTLKSGSELDVKIGRERFHAPEILFTPGLWNEGGVSRSLSQAVLDALAELDSDTKADMLDDIVVVGGSARMDGLGDRLEEDLKAMLPEWMSERVDVRVPAADELNHRFVPVMKPFLEKAEKEAAALKTRNRTSRGDPSAVTVGAEMLLEEGAGSNDAGTDGGDWITTAQWAETPEV 1736
BLAST of mRNA_H-paniculata_contig239.6461.1 vs. uniprot
Match: A0A6H5JDL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL2_9PHAE) HSP 1 Score: 480 bits (1235), Expect = 1.800e-150 Identity = 264/495 (53.33%), Postives = 327/495 (66.06%), Query Frame = 2
Query: 530 PALAMSTMARLASAEHGITSMGNTVVIELGAWKIRVGMVESGGGQ-ECKSFFDEFPCSVARPRREAADLDELVNGASSFSAPMYSKFRESGVFVGGDAWYCCLDHPDSGLRSNLTLSCPLDRGRVRLRDGGVKSDDTERLIDHAFGLLKQDPTATPTLVTYKPTAAPEEVWEVASILLENHRVPAVRLVNEAQLAALAAGVTTGIVVDIGESGVYVTPIFAGSPVAKAVQSVPCGGGDLTRYLDYMLISRTNEQFNQMVDRRRLEYTRKLKEEHCFVPLDFQDEAERCGNFRRKTMRVFEGAQVSPKLSAYEACSSQQFNDDKESSADNPVTVSFTQKAGTQLDIKIGRERFHAPELLF----QPELWAEMESEDGLDDLVVAAVAGLDADVRAQMLGDVVLVGGSAALPGLLERLEQDLMAIVPEHLCEKVHVRVLGDDVRRHSNKLSRGSATAVTVGAEALLR--AEEKDQCA----WIKSTEWEDNSDVFRR 1981
P +S M RLA A+HG+ GNTVV+ELGAW++R G+V G + + S+FD+FPC VARP +E ADL ELVNGASS +APMYSKFRE +DT RL DHA+GLLKQD + +PTL+TYKPTA +EV +AS+LLE HRVPA+R+VNEAQLAALA GV G++VDIGESGV VTPIF G PV AV+S CGGGD+T++LDYML+SRTNE FNQM DRRRLEYTR++KEEHC+VPLDF E E G F+RK MRV +GAQ SP LS YEAC S+ F DD ++ + T +FT K+G++LD+KIGRERFHAPE+LF P LW E L +V+ A+A LD+D +A ML D+VLVGGSA + GL +RLE+DL A++PE + EKV VRV D H N+ SRG +AVTVGAE LL A D WI + +W + +V R
Sbjct: 647 PLSCLSPMVRLAPADHGLGREGNTVVLELGAWRVRAGVVTPSGEEGKSSSYFDDFPCCVARPSKEGADLGELVNGASSLAAPMYSKFRE---------------------------------------------EDTVRLADHAYGLLKQDSSLSPTLLTYKPTATVDEVLALASVLLEVHRVPAIRMVNEAQLAALAVGVKVGVIVDIGESGVSVTPIFDGFPVPPAVRSECCGGGDVTKFLDYMLLSRTNEHFNQMTDRRRLEYTREMKEEHCYVPLDFALEVEEYGAFKRKAMRVCKGAQASPMLSGYEACDSRDFIDDTDTDEEVTKTKTFTLKSGSELDVKIGRERFHAPEILFTASHHPGLWNEGGVSRSLSQVVLDALAELDSDTKADMLDDIVLVGGSARMDGLGDRLEEDLKAMLPEWMSEKVDVRVPAADELNHRNRTSRGDPSAVTVGAEILLEEGAGSNDHGTKGGDWITTAQWAETPEVLTR 1096
BLAST of mRNA_H-paniculata_contig239.6461.1 vs. uniprot
Match: W7TNT9_9STRA (Actin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNT9_9STRA) HSP 1 Score: 261 bits (666), Expect = 3.100e-69 Identity = 150/403 (37.22%), Postives = 231/403 (57.32%), Query Frame = 2
Query: 608 IELGAWKIRVGMVESGGGQECKSFFDEFPCSVARPRREAADLDELVNGASSFSAPMYSKFRESGVFVGGDAWYCCLDHPDSGLRSNLTLSCPLDRGRVRLRDGGVKSDDTERLIDHAFGLLKQDPTATPTLVTYKPTAAPEEVWEVASILLENHRVPAVRLVNEAQLAALAAGVTTGIVVDIGESGVYVTPIFAGSPVAKAVQSVPCGGGDLTRYLDYMLISRTNEQFNQMVDRRRLEYTRKLKEEHCFVPLDFQDEAERCGNFRRKTMRV--FEGAQVSPKLSAY-----EACSSQQFNDDKESSADNPVTVSFTQ--KAGTQLDIKIGRERFHAPELLFQPELWAEMESEDGLDDLVVAAVAGLDADVRAQMLGDVVLVGGSAALPGLLERLEQDLMAIVP 1789
+E+G W+IR G VE G + ++ EFPC +ARP + +ADL +V AS + MY +FRE GVF+G DAWYC DHPD LR +L L P DR R+ ++ D + L+ + F + T TP +VTYKPT+ +E EV +L E +VR +NEA + + A V T + +D+GE V PI+ + K V++ GG DLT+Y+ YML+SR NE ++ +V+R+ LE R +KE H +V DF E R G F R+ + V F AQ++ + S + S ++ + +S D +V Q K G +L + +G ERFH EL F+P+L+ ++ + DLV+ ++A +D ++ +L V++ G S+ LPGL+ER+ ++L +P
Sbjct: 893 VEIGTWRIRAGWVEVGTSKSFQTV--EFPCIIARPSKASADLTTIVQHASIKADAMYGRFREMGVFIGKDAWYCAFDHPDPVLRGSLKLEAPFDRDRL------IRPADLKLLLKYVFEKCEVCLTKTPLVVTYKPTSTLKEREEVVEMLFEYCEASSVRFLNEATMLSSLANVVTALTIDLGEDTTRVVPIYEQMILEKGVETAALGGIDLTKYMAYMLLSRRNEVYSSLVERKMLEVARLIKESHAYVAADFNCERGRYGTFEREKIDVMKFHRAQIATEESVVPGRRLDMASVREPDGKSNTSRDGRGSVEVRQPLKNGEELVLSVGCERFHCGELFFRPKLFPDIGQTTSVIDLVMKSLASVDKELWPLLLSHVLIAGQSSRLPGLVERITKELKDSLP 1287
BLAST of mRNA_H-paniculata_contig239.6461.1 vs. uniprot
Match: A0A813I0N9_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813I0N9_POLGL) HSP 1 Score: 133 bits (335), Expect = 3.800e-28 Identity = 132/491 (26.88%), Postives = 206/491 (41.96%), Query Frame = 2
Query: 641 MVESGGGQECKSFF--DEFPCSVARPRREAADLDELVNGASSFSAPMYSKFRESGVFVGGDAWYCCLDHPDSGLRSNLTLSCPLDRGRVRLRDGGVKSDDTERLIDHAF-GLLKQDPTATPTLVTYKPTAAPEEVWEVASILLENHRVPAVRLVNEAQLAALAAGVTTGIVVDIGESGVYVTPIFAGSPVAKAVQSVPCGGGDLTRYLDYMLISRTNEQFNQMVDRRRLEYTRKLKEEHCFVPLDFQDEAERCGNFRRKTMRVFEGAQVSPKLSAYEACSSQQFNDDKESSADNPVTVSFTQKAGTQLD---IKIGRERFHAPELLFQPELWAEMESEDGLDDLVVAAVAGLDADVRAQMLGDVVLVGGSAALPGLLERLEQDLMAIVPEHLCEKVHVRVLGDDVRRHSNKLSRGSATAVTVGAEALLRAEEKDQCAWIKSTEWED-NSDVFRRRWYIL*DHTL----SSTAGYPRRTEVSLCCCFFSHLF 2080
+V++G G CK+ F D+ P SV L+ + + + ++ R+ FVG +A R LTL P++ G V DD E++ H F L+ P P L+T P + I+ E VPA+ + +A L+ A+G TTG+V DIG+ + PI+ G + A++ + G DLT +L +L R F+ +R E R LKE+ C+V LDF E N +T S +K D I +G ERF PE+LFQP L + S G+ D A+ D D+R + +VVL GG+ PG+ +R+ ++L A+ P + +RV+ RR+S V +G ++L + Q WI E+++ + R ++ H L S T + TEVS +HL+
Sbjct: 10 VVDNGSGV-CKAGFSGDDAPRSV---------FPSLIGRPKNLNVMLGTETRD--YFVGDEA---------QSKRGVLTLKYPIEHGIV------TNWDDMEKIWHHTFYNELRSSPEEHPVLLTEAPLNPKANRERMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGVVTDIGDGVSHTVPIYEGYALPHAIRRLDLAGRDLTEFLMRILTER-GYSFSSTAER---EIVRDLKEQLCYVALDFDTELR------------------------------------------NSLTSSGAEKTYELPDGNLITVGSERFRCPEVLFQPSLVGKEAS--GIHDTTFEAIIRCDVDIRRDLYANVVLSGGTTMFPGIGDRMAKELTALAPS----TIKIRVIAPPERRYS----------VWIGG-SILASLSTFQQMWISKAEYDEAGPSIVHRYGKVI--HGLRYLPSRTCSFATFTEVSHAVAARNHLY 408
BLAST of mRNA_H-paniculata_contig239.6461.1 vs. uniprot
Match: V9L2X3_CALMI (Actin-like protein (Fragment) n=1 Tax=Callorhinchus milii TaxID=7868 RepID=V9L2X3_CALMI) HSP 1 Score: 125 bits (314), Expect = 2.390e-27 Identity = 119/476 (25.00%), Postives = 206/476 (43.28%), Query Frame = 2
Query: 578 GITSMGNTVVIELGAWKIRVGMVESGGGQECKSFFDEFPCSVARPRREAADLDELVNGASSFSAPMYSKFRESGVFVGGDAWYCCLDHPDSGLRSNLTLSCPLDRGRVRLRDGGVKSDDTERLIDHAF-GLLKQDPTATPTLVTYKPTAAPEEVWEVASILLENHRVPAVRLVNEAQLAALAAGVTTGIVVDIGESGVYVTPIFAGSPVAKAVQSVPCGGGDLTRYLDYMLISRTNEQFNQMVDRRRLEYTRKLKEEHCFVPLDFQDE---AERCGNFRRKTMRVFEGAQVSPKLSAYEACSSQQFNDDKESSADNPVTVSFTQKAGTQLDIKIGRERFHAPELLFQPELWAEMESEDGLDDLVVAAVAGLDADVRAQMLGDVVLVGGSAALPGLLERLEQDLMAIVPEHLCEKVHVRVLGDDVRRHSNKLSRGSATAVTVGAEALLRAEEKDQCAWIKSTEWED-NSDVFRRRWY 1990
G+++ +V+++G+ ++ G + QE + FP + RP+ E E +VG DA + +R L+L P+ G V D+ E++ HAF L+ +P P L+T + + IL ++ VP + +A LA ++G TTG+++D G+ + P++ G + A+Q + G DLT YL +L R FN ++ E R++KE+HC V LDF++E +ER GN+ + +T G Q+ I IG ERF A E+LF+PE+ + G+ + ++ ++ D D+R +G+++L GG+ L GL R+++++ + VP +L VHV R S G A+L + Q AWI E+ + S++ R+ +
Sbjct: 1 GVSNYNTPIVLDIGSGLLKGGFAD----QELPTTI--FPTVIGRPKYEDVSRGRF----------------ERDFYVGNDAQH---------MRGVLSLYYPMKHGVVN------NWDEMEKIWHHAFYHQLRIEPEEHPVLLTEAAMNPHQNRERMVEILFDSFNVPFSYVAMQAVLALYSSGRTTGVILDSGDGVTHTVPVYEGYSLPHAIQRLNLAGRDLTEYLKKLLKER-GYSFNTSAEQ---EIVREIKEKHCCVALDFEEELSNSERFGNWN----------------------------------------LHYTLPDG-QI-IAIGNERFRASEILFRPEIIGK--DHYGIHESLLRSIMRCDIDLRKTFVGNIILSGGNTMLTGLPARIQKEIRSTVPLNLSTHVHV---ASPENRDFTVWSGG----------AVLASSHAFQSAWISREEYSEYGSNIVHRKCF 378
BLAST of mRNA_H-paniculata_contig239.6461.1 vs. uniprot
Match: A0A196SJ06_BLAHN (Actin n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SJ06_BLAHN) HSP 1 Score: 124 bits (312), Expect = 4.130e-27 Identity = 106/389 (27.25%), Postives = 165/389 (42.42%), Query Frame = 2
Query: 806 VGGDAWYCCLDHPDSGLRSNLTLSCPLDRGRVRLRDGGVKSDDTERLIDHAF-GLLKQDPTATPTLVTYKPTAAPEEVWEVASILLENHRVPAVRLVNEAQLAALAAGVTTGIVVDIGESGVYVTPIFAGSPVAKAVQSVPCGGGDLTRYLDYMLISRTNEQFNQMVDRRRLEYTRKLKEEHCFVPLDFQDEAERC--GNFRRKTMRVFEGAQVSPKLSAYEACSSQQFNDDKESSADNPVTVSFTQKAGTQLDIKIGRERFHAPELLFQPELWAEMESEDGLDDLVVAAVAGLDADVRAQMLGDVVLVGGSAALPGLLERLEQDLMAIVPEHLCEKVHVRVLGDDVRRHSNKLSRGSATAVTVGAEALLRAEEKDQCAWIKSTEWEDN 1963
VG + C + R LTL P++ G V DD E++ H F L+ P P L+T P + I+ E +PA+ + +A L+ AAG TTG+VVD G+ + PIF G + A+ + G DLT YL +L +E+ +V E R +KE+ C+V DF E + GN K + +G N +T+S ERF PE+LF+P + G+ + A ++ D D+R M +++L GGS PG+ ERL+++L+++VP V V+V R++ V +G ALL Q W+ E+E++
Sbjct: 43 VGTENKDCFVGDEAQSKRGVLTLKYPIEHGIV------TDWDDMEKIWHHTFYNELRVSPEEHPVLLTEAPLNPKANRERMTQIMFETFNIPAMYIQIQAVLSLYAAGRTTGMVVDSGDGVTHTVPIFEGYSLPHAILRMDLAGRDLTDYLQRIL----SERGYSLVSTAEREIVRDIKEKLCYVAYDFDKEMKIADEGNSLEKNYEMPDG---------------------------NIITIS--------------NERFRVPEVLFKPSMAGLELRNGGVHETAFATISKCDVDIRRSMYENIILSGGSTMYPGIGERLQKELLSMVPAD----VKVKVFASPERKYM----------VWIGG-ALLTTLSSFQQMWVTKAEYEES 365
BLAST of mRNA_H-paniculata_contig239.6461.1 vs. uniprot
Match: A0A256ZH18_9ARCH (Actin, cytoplasmic 2 n=1 Tax=Candidatus Bathyarchaeota archaeon ex4484_135 TaxID=2012509 RepID=A0A256ZH18_9ARCH) HSP 1 Score: 124 bits (311), Expect = 1.140e-26 Identity = 113/370 (30.54%), Postives = 177/370 (47.84%), Query Frame = 2
Query: 854 LRSNLTLSCPLDRGRVRLRDGGVKSDDTERLIDHAFG-LLKQDPTATPTLVTYKPTAAPEEVWE-VASILLENHRVPAVRLVNEAQLAALAAGVTTGIVVDIGESGVYVTPIFAGSPVAKAVQSVPCGGGDLTRYLDYMLISRTNEQFNQMVDRRRLEYTRKLKEEHCFVPLDFQDEAERCGNFRRKTMRVFEGAQVSPKLSAYEACSSQQFNDDKESSADNPVTVSFTQKAGTQLDIKIGRERFHAPELLFQPELWAEMESEDGLDDLVVAAVAGLDADVRAQMLGDVVLVGGSAALPGLLERLEQDLMAIVPEHLCEKVHVRVLGDDVRRHSNKLSRGSATAVTVGAEALLRAEEKDQCAWIKSTEWE 1957
LR + +S PL+ G ++ DG K L++ AF L+ DP P L+T +P P E +A IL E+ R+P + + +A LAA A TG++VD+G+ + PI+ G + A+Q GG D+T YL +++ ++ E R +KE+ C+V D EA + +T RV E +P +E+ P +T G+ + + ERF APE+LF P L E L +++ A+ D DVR M+ ++VL GGS+ PGL ERLE++L A++ E K+ V ++ + R++ AV +GA L E Q +WI E+E
Sbjct: 69 LRGIMRISYPLEHGVIKDWDGFKK------LLEFAFTECLRVDPAKHPILMT-EPPLNPRNCRERIAEILFEDFRIPKLYVGMQALLAAYFAEKMTGLIVDLGDGVCHAVPIYEGFTIRHAIQRTNIGGRDITNYLARLIMHHRGVALTTTAEK---EIVRDIKEKLCYVAPD--PEAYLAAIYG-ETERVKEYVAGAPPS--------------EETGVLKPEPGEYTLPDGSTVTLL--EERFLAPEVLFAPGLIGR--DEPSLPEIIFDAIMACDIDVRKAMVENIVLTGGSSLFPGLKERLEKELNAMLQE-AGMKITVNIITPENRQY----------AVWIGASKLAALPEF-QKSWITREEYE 395
BLAST of mRNA_H-paniculata_contig239.6461.1 vs. uniprot
Match: A0A8M1KF29_CLUHA (uncharacterized protein LOC122130288 isoform X1 n=2 Tax=Clupea harengus TaxID=7950 RepID=A0A8M1KF29_CLUHA) HSP 1 Score: 128 bits (321), Expect = 2.440e-26 Identity = 121/415 (29.16%), Postives = 172/415 (41.45%), Query Frame = 2
Query: 743 VNGASSFSAPMYSKFRESGVFVGGDAWYCCLDHPDSGLRSNLTLSCPLDRGRVRLRDGGVKSDDTERLIDHAFGLLKQDPTATPTLVTYKPTAAPEEVWEVASILLENHRVPAVRLVNEAQLAALAAGVTTGIVVDIGESGVYVTPIFAGSPVAKAVQSVPCGGGDLTRYLDYMLISRTNEQFNQMVDRRRLEYTRKLKEEHCFVPLDFQDEAERCGNFRRKTMRVFEGAQVSPKLSAYEACSSQQFNDDKESSADNPVTVSFTQKAGTQLDIKIGRERFHAPELLFQPELWAEMESEDGLDDLVVAAVAGLDADVRAQMLGDVVLVGGSAALPGLLERLEQDLMAIVPEHLCEKVHVRVLGDDVRRHSNKLSRGSATAVTVGAEALLRAEEKDQCAWIKSTEWEDNSD--VFRR 1981
V G + M +F E ++G DA + +R L L P+ G +R DD E + H F L DP P ++T E + ++ E VP + +A LA AAG TTG+V D G+ + P+F G + AVQ G D+T +L +L EQ M E R +KE HC V LD++ E R EGA SP V +T G Q+ +++ +ERF APE+LF+PEL G+ + + ++ D D+R +G++VL GG+ L GL ERL+ +L +VP L E V V D S S AV A AWI E+E+ VFR+
Sbjct: 1475 VIGVPKYEEVMNGRF-ERETYIGHDAQH---------MRGVLALKYPMKNGIIR------NWDDMEMIWSHTFQQLNVDPEDHPVMLTEAALNPKENRQRMVELMFEAFSVPLTYVAMQAVLALYAAGRTTGVVFDSGDGVSHSVPVFEGYCLPHAVQRFTLAGIDVTLHLKKLL----QEQGVSMCTSAEQEIVRDMKERHCCVALDYEAELAR------------EGASSSP--------------------------VYYTLPDG-QI-VRLTKERFRAPEILFKPELIGR--DHYGIHESIFKSILHSDIDLRKSFVGNIVLSGGNTLLAGLPERLQSELKKMVPPDLAECVRVMSPKD------RDFSVWSGGAVLSNLSAF-------SSAWISQDEYEEYGPQIVFRK 1814
BLAST of mRNA_H-paniculata_contig239.6461.1 vs. uniprot
Match: UPI0003597E03 (actin-5 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI0003597E03) HSP 1 Score: 122 bits (306), Expect = 2.720e-26 Identity = 105/395 (26.58%), Postives = 170/395 (43.04%), Query Frame = 2
Query: 782 KFRESGVFVGGDAWYCCLDHPDSGLRSNLTLSCPLDRGRVRLRDGGVKSDDTERLIDHAF-GLLKQDPTATPTLVTYKPTAAPEEVWEVASILLENHRVPAVRLVNEAQLAALAAGVTTGIVVDIGESGVYVTPIFAGSPVAKAVQSVPCGGGDLTRYLDYMLISRTNEQFNQMVDRRRLEYTRKLKEEHCFVPLDFQDEAERCGNFRRKTMRVFEGAQVSPKLSAYEACSSQQFNDDKESSADNPVTVSFTQKAGTQLDIKIGRERFHAPELLFQPELWAEMESEDGLDDLVVAAVAGLDADVRAQMLGDVVLVGGSAALPGLLERLEQDLMAIVPEHLCEKVHVRVLGDDVRRHSNKLSRGSATAVTVGAEALLRAEEKDQCAWIKSTEWEDN 1963
K+R GV VG C + R L++ P++ G V DD E++ H F L+ P P L+T P ++ I+ E PA + +A L+ ++G TTG+V D G+ ++ PI+ G + AV+ + G +LT+YL ++ NE+ +V E R +KE+ C+V LD++ E N + S+ GT I IG ERF PE LFQP L M+S G+ + + +V G D D+R + + V+ GGS PG+ +R++++L A+VP + V+V+ R++S V +G L Q WI E++++
Sbjct: 44 KYR--GVMVGMGQKDCYIGDEAQSKRGMLSMRYPVENGIVN------NWDDMEKIWHHTFYNELRVAPEEHPVLITEAPHNPKANREKMTQIMFETFNSPAFFVQIQAVLSLYSSGRTTGVVSDSGDGVTHMVPIYEGYALPHAVKRINLAGRELTQYLQRIM----NERGYSLVTSSEFEICRDIKEKLCYVALDYESEMAASAN-------------------------------------SSSTEKSYEMPDGTV--ITIGNERFRCPEPLFQPSLLG-MDSV-GIHEHLYNSVTGCDVDIRRDLYANTVMSGGSTMFPGIADRMQKELSALVPS----AIRVKVIAPPERKYS----------VWIGGSVLASLSTFQQM-WITRQEYDES 370
BLAST of mRNA_H-paniculata_contig239.6461.1 vs. uniprot
Match: UPI000711795A (actin n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711795A) HSP 1 Score: 120 bits (302), Expect = 6.580e-26 Identity = 106/400 (26.50%), Postives = 167/400 (41.75%), Query Frame = 2
Query: 770 PMYSKFRES-GVFVGGDAWYCCLDHPDSGLRSNLTLSCPLDRGRVRLRDGGVKSDDTERLIDHAF-GLLKQDPTATPTLVTYKPTAAPEEVWEVASILLENHRVPAVRLVNEAQLAALAAGVTTGIVVDIGESGVYVTPIFAGSPVAKAVQSVPCGGGDLTRYLDYMLISRTNEQFNQMVDRRRLEYTRKLKEEHCFVPLDFQDEAERCGNFRRKTMRVFEGAQVSPKLSAYEACSSQQFNDDKESSADNPVTVSFTQKAGTQLDIKIGRERFHAPELLFQPELWAEMESEDGLDDLVVAAVAGLDADVRAQMLGDVVLVGGSAALPGLLERLEQDLMAIVPEHLCEKVHVRVLGDDVRRHSNKLSRGSATAVTVGAEALLRAEEKDQCAWIKSTEWEDN 1963
PMY E+ FVG +A R L L P++ G V DD E++ H F L+ P P L+T P + I+ E +PA+ + +A L+ AAG +TG+VVD G+ + PI+ G + A+ + G DLT Y+ +L R F +R E R +KE+ C+V DF K M++ A+ T+ + I IG ERF PE+LF P + G+ + A V D D+R + +++L GGS PG+ ERL+++L+++VP V V+VL R++ V +G ALL + W+ +E++++
Sbjct: 26 PMYMVGMENKDCFVGEEA---------ESKRGILNLKYPIEHGIV------TNWDDMEKIWHHTFYNELRAQPEEHPVLLTEAPLNPKANRERMTQIMFETFNIPAMYIQIQAVLSLYAAGRSTGLVVDSGDGVTHTVPIYEGYSIPHAILRMDLAGRDLTEYMQTILTER-GYTFTSSAER---EIVRDIKEKLCYVAYDFD-----------KEMKI----------------------------ANEGSTIERDYELPDGNIITIGNERFRVPEVLFNPTMAGRELRNGGVHETTYATVQKCDVDIRRSLYNNIILSGGSTMYPGIGERLQKELLSLVPAD----VKVKVLASPERKYM----------VWIGG-ALLTTLSSFKQMWVTKSEYDES 352 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig239.6461.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig239.6461.1 >prot_H-paniculata_contig239.6461.1 ID=prot_H-paniculata_contig239.6461.1|Name=mRNA_H-paniculata_contig239.6461.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=584bp MFAETDEEAEAFAAATFGAAERAKAKTIAFDTAVAATAAAAAAGGGSSAVback to top mRNA from alignment at H-paniculata_contig239:14354..22255- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig239.6461.1 ID=mRNA_H-paniculata_contig239.6461.1|Name=mRNA_H-paniculata_contig239.6461.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7902bp|location=Sequence derived from alignment at H-paniculata_contig239:14354..22255- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig239:14354..22255- >mRNA_H-paniculata_contig239.6461.1 ID=mRNA_H-paniculata_contig239.6461.1|Name=mRNA_H-paniculata_contig239.6461.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3504bp|location=Sequence derived from alignment at H-paniculata_contig239:14354..22255- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |