prot_H-paniculata_contig239.6462.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig239.6462.1
Unique Nameprot_H-paniculata_contig239.6462.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length767
Homology
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BLAST of mRNA_H-paniculata_contig239.6462.1 vs. uniprot
Match: D7FHM1_ECTSI (TiTiN family member (Ttn-1) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM1_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 2.390e-9
Identity = 47/97 (48.45%), Postives = 69/97 (71.13%), Query Frame = 0 
Query:  329 RIKEKLAFERAEFRRYREKTDAQLKRLRKEAERAEELEEQLDKKSLKIKQKEAEVRALAVDGKEIRELRQSVSLKEDHLKNLRLEMASLRIATEAAE 425
            R +  LA ER +F   +  ++A++K LR  A RA++LE+QL  KSL++KQKEAE R LA DGK +R LR+S++ K++ L  LR E+ +LR+A+ AAE
Sbjct:  838 RAEASLAAERQKFSAAKRASEAKIKLLRAAAGRADDLEDQLSAKSLRLKQKEAEARVLATDGKVVRGLRESLTCKDNALNELRQELGNLRVASAAAE 934
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig239.6462.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHM1_ECTSI2.390e-948.45TiTiN family member (Ttn-1) n=1 Tax=Ectocarpus sil... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 320..382
NoneNo IPR availableCOILSCoilCoilcoord: 393..437
NoneNo IPR availableCOILSCoilCoilcoord: 102..122
NoneNo IPR availableCOILSCoilCoilcoord: 260..304
NoneNo IPR availableCOILSCoilCoilcoord: 154..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig239contigH-paniculata_contig239:22270..37101 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig239.6462.1mRNA_H-paniculata_contig239.6462.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig239 22270..37653 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig239.6462.1 ID=prot_H-paniculata_contig239.6462.1|Name=mRNA_H-paniculata_contig239.6462.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=767bp
MVLPSAHGPAVVAMAEAEDNNFPLPVIDSDDPLDFFGAIRELVERGLTVE
ERAELAVIEERGEEAKAGVTTTINFPRVSERRLQEEPRGDVSAAEMPTTA
AVAALQRELAEAKERIALLTQETASVAEACAQSRAVEMEANVLREKHRDV
VNDLSDARADQAAAEQDVISLKEEILRLEEILVKTQHDAEREGTKASTDA
ELTKAELGVLRSQIGTPTATQLENPQFITIFDGGNKVDLANKLLTTISYK
KDLEFSVSKLVQYKQKVEMLKGAAEGLQQERDRARLERDRLKQLIEKLAE
QQTQVAAGVEDAKKVAAAAVRREREEVLRIKEKLAFERAEFRRYREKTDA
QLKRLRKEAERAEELEEQLDKKSLKIKQKEAEVRALAVDGKEIRELRQSV
SLKEDHLKNLRLEMASLRIATEAAEKETELAEQFKDQLIQQRRMVTGIAG
AAPTTGTLPADPHVRDQSTASLSSSGQWGVPLGGATVSTAGTAAGADRVL
SGEELTCTQSMSSVGSVGDEDDGVLGAIPEEEEQENGGEQAKQQEDEAEG
ETIAGIDGKPERMLDESCVLDGDDREEAERAAEINGKVEGEMEGTGESDG
DDGEEAEKEDNENDDADEKEEMLDDVVSASGVQEDDQEDVFDDEQDPEEF
MSELGEEVDDISDVESEEMGSEEPDDISEAEIEEMGSGEEPIDISEAESE
EMGSEEPIDVSEAESEEMGSEEPDDISEAESEEMGSELGEDLVHLTHDVM
GNDGSSVGIPANESIKL
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