prot_H-paniculata_contig10997.645.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig10997.645.1
Unique Nameprot_H-paniculata_contig10997.645.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length111
Homology
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BLAST of mRNA_H-paniculata_contig10997.645.1 vs. uniprot
Match: A0A6H5LBF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBF2_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 1.830e-21
Identity = 57/110 (51.82%), Postives = 72/110 (65.45%), Query Frame = 0 
Query:    1 MDITDIEGDSSSGIRTLPVLLGREKSLALALMLLTAGVGCALLAIMSSATSTTGARTLAAALCGLFTSPLYNNIARVRGAEFSPDSLSTAVEQALGPLALVLGLMGFALR 110
            MDI D+EGD  +G+RTLPVL+GR+ +L  A  LL+ GVG A + I+         R  AAAL  LF  PLY N+  V  + +S + LS+A+EQ LGPLALVLGLMG  LR
Sbjct:  308 MDIADVEGDREAGVRTLPVLMGRQAALVFATALLSVGVGAAGVGILEGTADPE--RPAAAALSALFVLPLYVNLFLVGRSSYSKERLSSAIEQTLGPLALVLGLMGVVLR 415
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BLAST of mRNA_H-paniculata_contig10997.645.1 vs. uniprot
Match: D8LD89_ECTSI (Prenyltransferase, UbiA family, Putative 4-hydroxybenzoate octaprenyltransferase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD89_ECTSI)

HSP 1 Score: 50.1 bits (118), Expect = 7.660e-5
Identity = 26/50 (52.00%), Postives = 35/50 (70.00%), Query Frame = 0 
Query:    1 MDITDIEGDSSSGIRTLPVLLGREKSLALALMLLTAGVGCALLAIMSSAT 50
            MDI D+EGD  +G+RTLPVL+GR+ +L  A  LL+AGV  A + I+   T
Sbjct:  190 MDIADVEGDREAGVRTLPVLMGRQAALVFATALLSAGVVAAGVGILEGTT 239
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10997.645.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LBF2_9PHAE1.830e-2151.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD89_ECTSI7.660e-552.00Prenyltransferase, UbiA family, Putative 4-hydroxy... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000537UbiA prenyltransferase familyPFAMPF01040UbiAcoord: 2..67
e-value: 1.0E-8
score: 34.8
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..71
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..109
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 110..110
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 47..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..46
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 72..90
NoneNo IPR availableTMHMMTMhelixcoord: 27..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10997contigH-paniculata_contig10997:330..3121 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10997.645.1mRNA_H-paniculata_contig10997.645.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig10997 312..5044 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig10997.645.1 ID=prot_H-paniculata_contig10997.645.1|Name=mRNA_H-paniculata_contig10997.645.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=111bp
MDITDIEGDSSSGIRTLPVLLGREKSLALALMLLTAGVGCALLAIMSSAT
STTGARTLAAALCGLFTSPLYNNIARVRGAEFSPDSLSTAVEQALGPLAL
VLGLMGFALR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000537UbiA_prenyltransferase