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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 3 |
| Model size | 336 |
| Cds size | 276 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig23869.6452.1 >prot_H-paniculata_contig23869.6452.1 ID=prot_H-paniculata_contig23869.6452.1|Name=mRNA_H-paniculata_contig23869.6452.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=92bp
MTMLRAHSAWGRWRVASGALLMALGDVCAAIHEVCGASDDGGYCWSRRCC
WQENERKPRALPYLQLRCRVAGQFSTGAQVQHGRCLWNFAVG back to topmRNA from alignment at H-paniculata_contig23869:183..3622+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig23869.6452.1 ID=mRNA_H-paniculata_contig23869.6452.1|Name=mRNA_H-paniculata_contig23869.6452.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3440bp|location=Sequence derived from alignment at H-paniculata_contig23869:183..3622+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTCCACCGCGTTGACGACAACATCCACTGCGCAACCTGGCGGGAAAAACG
TGTTGTTTGATGACGATGCTCAGAGCACATTCTGCGTGGGGCCGATGGAG
AGTCGCGTCAGGTGAGAGGTAAATACGCAGACCGGAAGGTTTGTTAGGCC
AAAGCGCGAATGTATGGAACTCAATATAAATATACAGCCCCGTACACTCC
CTTGCTAGTCATACTGCTTTGGAGTAGTACACAAAATATTGGGAAAAGAA
GGGTTAACTTTCGACGTAAGTTTCGAATTTTATGTTGTTTCGTTTTTGTT
TTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTAAAAAAATTATATATATAT
ATATCGGAACGTGGTAATTTTCGACGTAATGTTCGAATCTACAGATGCTA
TTACGTTCCGATTTTTTATTTTTTGTCGAGTGTCTCGACAAAGCAGCTCT
TTTTCTTTTGCTTTTGGAGCAAGAAACTGATTCGTCAGTTGAGATCGCTG
TCTTGGTCAGTCAACCATATATATATATATATATATATACACACACACAA
AAAGCTCAGAGTCTTCTTTTTCGTTACTAAAACAACTAGTTTCTAGTTTG
GATCACTGTCAAAATGATTCCACGTTTCACCATGTTCAAGACGGGTGGCG
AGGGAGCTTCGCGCGTGCTGTTGATGGTCCATGTGATTCGGATGCCATGT
GTAGGGCCTGGAGCCCTTGAATTCTTTTGGGGATTTTTTGTTTGTTTTTA
TTCATATCGTACTGACTATTATCCAGAGAATACATACAATTGGCTACATA
TAGCTAGGGGGGCTTGCGACTAGGATGCCAGGTGAAATTTACGGCCTTCA
CGCTACAGTATGATACAGTAGTGGCGATTTATGACTTTGGAGATGGTCTT
GGCCGGCTGGTTGATATTTTGCTCAAATTGTGTTGGACCCAACTGACGGC
TATCGTGCCCATCCATACCTTGACCACCCATCCAGGGTGAGCTTGAATGT
GTGAAGATATACGGTGAAATCTGTATGCCCTCCTCGGCAGCAAGCAGCAT
ATACTTGGAGAGAATATGTAGCACGCGAGGGTTCAGGCGCATGACGCATG
ACGCACGTTCTGCGAGCTGTCAGACAAGAGACTGAACGTCGAACATGGGT
AGTGATCTTACGAAAAGTGCCAACAGGGGACGGTTCGGAAGGGTTTCTCC
TGCCGCAGGCTGTTGTTCGCCCTTCACCCTACCCCGCCCCGTCCGACATG
GAGATCCTCTTTTCGGTTGAGTGGTGAAGTGACGTGTTGATTCATGCTAC
TGACACATCCAGATACGCAACATGTCTACAGTCGTACAGCGACAATATTC
GTACGCTATGGTATTATACAGCAAAGTAGTAGTGTAAACACGGCTACGCC
TGTGCAGTTCGTGCATGACCTCAACCCGCGCACACGCTATGCTCGCGGTG
GGGGCTTGCGTAGCAAACGACACTGCACGCCGCGCTTGCAGTATCTCGTT
ATGCTCGTACAGAGATTCGATATTCAGGAGGTACTTGAGAACAAAGTCGA
AAATTTGGTCCGAATCTACGGCGAGGATGACGGTAACAACTGCCACCTTT
TAGTTCTGAATAACACAGAATTACGCGGAGCATTTGGGACGAAAACTAGA
AGGAAAAGACTAAGCTTCGCGTGAGTTTCACAATGTACGGGCACATGAAA
TAGTGCAAGTGATTCGTTTTTCAGGAGGTACTTGAGAACAGATTCAAAAA
TCTGTTCCGAAAGTACGACGAGGATGATGATGATAGCCAACACCTTTAGT
AGTGAATAACATATGATTGCATGGGGCATTTGTGATTTTTTTTCTTCGAA
AAACCGAGAAGAGCAGTCGCGTGAATTCCAGATGGTACGGATACATGAAA
ATAGTGAAGTGTTGACCCACTGTTTTTTCCTTTCATTATAATTTCATTTG
GAACGGTCGTAGATGGCCCGGGGCACACAGAAAACTGCTAAACATGCTCA
TCATGCTGAGCCATGGAGTCAATTCATGTGTGTTTTTCTTCTGGTTTTTG
TCACAAATGATCGAATCTAACAGGCACATTTATGTTTGTGTTTGTTGTGG
TTCTGCTGGGTGCTCGACGTATTATCTGGGCATGTTTAAACTGTTGACGT
ATTCGAGCCATCGAGCGATTTGATCGAATCTTTTCCAATTTTCCCAGCAT
CAAACTCCCCCCAACCCGAACCGAGAGACTATCAGCTGGACATTCTCGGG
GTAATTGGGTTGTGAGTAGTAGGATTAACGTCATCTATTTTCTGATTCGG
AAACCTAGTTTTGCACAATGAACATTGCGTCGTCATATCTAGTAAATACG
AGTGTATCGGGTATAGATTATTATTGTGCAATCCGGTTCTCGAATCTATG
CTCAACGGAGCAGGTAGTCGAGCGCTGAGAAGCAAAGTTGGACACGAGAC
CGTGTACACAATAGGTTTTTTGAAAATGGGAAACTATGAGATAGTAAGCA
TATTTGCCATACCTTATCCAAATGTCCAAAATTGCAAGTTGGGTTTGGAG
TTTCGGTGTTTCATGTTGTCGCCTTGTGTGCCACTCCTTCCCAGGCTCGG
CTCGCAGGTGTGTTAGGTGTGTTGTGTAAAGCTGCACGCAGTCTATGCGT
TGCTGAGTTTCGCGTTGATCGTATTGTCTCGCTGCATGTACATGGCAAAA
GGCAGTGGTCGGAGCGTGGATATCTGCCAAGGCAAAACGAGAGCGGAAAA
CAGCAAAAACAAGAGGCAGGAGTAACAGTAAAAATGTAACCTGATGGGAA
CCTTAGCAAAATTGAGAGGTGACGTAAATCGTTTTGGTTGTGATGAGTAT
CGCTATGGTGGTGTTGCCGGAATTTTGATGTTTTTATGACCCGTTGGTGT
TTTTTCTCTCACTCACGCGATTGCGCAGGTGCACTACTCATGGCCCTTGG
GGACGTTTGTGCTGCGATTCACGAGGTGTGTGGTGCCTCTGATGACGGGG
GATACTGTTGGTCGAGACGGTGCTGCTGGCAAGAGAACGAACGAAAGCCA
AGAGCACTCCCATACCTACAGCTTCGGTGCCGTGTTGCTGGACAGGTGTG
ACTTTCGCTATGTTGGCAGAAGTAGATGATCTGTGTCCGTCAGCGATATT
TGTGAATCAAGGTTTCTTTGGAGCATGGTAGCGATCACACACACGGCTTG
TTGGCGGCAACGGCGAGACTTGGAAGCAGTGTCCGCGTTCCTGTGCGATG
CAACACATTCCATGACTGCGAGGACTTACCCGGTGCTTGCTTCTGTTCCC
CGCCATGACGATATATATCACTCGCCCTAATCACTGCACGTACAACCACA
CTTTTGTTTCCTCGTGCAACGGCTCGTATTCAGTTTTCCACAGGTGCTCA
AGTCCAGCATGGTCGCTGCCTGTGGAACTTTGCTGTTGGA back to topCoding sequence (CDS) from alignment at H-paniculata_contig23869:183..3622+ >mRNA_H-paniculata_contig23869.6452.1 ID=mRNA_H-paniculata_contig23869.6452.1|Name=mRNA_H-paniculata_contig23869.6452.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=552bp|location=Sequence derived from alignment at H-paniculata_contig23869:183..3622+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACGATGCTCAGAGCACATTCTGCGTGGGGCCGATGGAGAGTCGCGTC
AGATGACGATGCTCAGAGCACATTCTGCGTGGGGCCGATGGAGAGTCGCG
TCAGGTGCACTACTCATGGCCCTTGGGGACGTTTGTGCTGCGATTCACGA
GGTGTGTGGTGCCTCTGATGACGGGGGATACTGTTGGTCGAGACGGTGCT
GCTGGCAAGAGAACGAACGAAAGCCAAGAGCACTCCCATACCTACAGCTT
CGGTGCCGTGTTGCTGGACAGGTGCACTACTCATGGCCCTTGGGGACGTT
TGTGCTGCGATTCACGAGGTGTGTGGTGCCTCTGATGACGGGGGATACTG
TTGGTCGAGACGGTGCTGCTGGCAAGAGAACGAACGAAAGCCAAGAGCAC
TCCCATACCTACAGCTTCGGTGCCGTGTTGCTGGACAGTTTTCCACAGGT
GCTCAAGTCCAGCATGGTCGCTGCCTGTGGAACTTTGCTGTTGGATTTTC
CACAGGTGCTCAAGTCCAGCATGGTCGCTGCCTGTGGAACTTTGCTGTTG
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