mRNA_H-paniculata_contig2385.6448.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig2385.6448.1
Unique Name	mRNA_H-paniculata_contig2385.6448.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

[Close]

BLAST of mRNA_H-paniculata_contig2385.6448.1 vs. uniprot
Match: D8LNC5_ECTSI (Nuclear nucleic acid-binding protein C1D n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNC5_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 2.630e-51
Identity = 98/137 (71.53%), Postives = 115/137 (83.94%), Query Frame = 2

Query:   56 DTVRPLTLMSREEVGACVSPADRAKLNLQMAYGVTSLFYMFLKTQGVSPSNHPVKAELDRIKGYFGRLQKVGKPPEERKLKIDAEASRRFINSALSGDNVWRDAQARNGSNSLPGSSAGAGIGRSNPAGQPVNNSAQ 466
            ++VRPLTLMSREEVG CVS  DRA LNLQ+AYGV+SLFYMFLKTQGVSPS HPVK ELDRI+GYFGRL+ VGKPPE+R LK+D +ASRRFIN+ALSGD+VW++A+  +   S     A AGIGR+NPAGQP + SAQ
Sbjct:   26 NSVRPLTLMSREEVGGCVSAKDRATLNLQVAYGVSSLFYMFLKTQGVSPSTHPVKGELDRIRGYFGRLKNVGKPPEQRTLKVDQDASRRFINAALSGDSVWQNAKGTD-PKSAQQKRASAGIGRANPAGQPEDFSAQ 161

[Close]

BLAST of mRNA_H-paniculata_contig2385.6448.1 vs. uniprot
Match: A0A835ZH36_9STRA (Nuclear nucleic acid-binding protein C1D (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH36_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 2.990e-17
Identity = 46/96 (47.92%), Postives = 67/96 (69.79%), Query Frame = 2

Query:   62 VRPLTLMSREEVGACVSPADRAKLNLQMAYGVTSLFYMFLKTQGVSPSNHPVKAELDRIKGYFGRLQKVGKPPEERKLKIDAEASRRFINSALSGD 349
            +RPLT  +REE+ + V+  + AKLN  MAYG++SL+YM L+T+G   ++H VK ELDRIKG  GRLQ V  P  +R + ++  A++RFI   L+G+
Sbjct:   39 LRPLTETTREELASQVTKQEMAKLNAAMAYGISSLYYMLLRTKGCDTTDHGVKKELDRIKGAMGRLQMVKVP--QRGIVVNVAAAQRFIKHGLAGN 132

[Close]

BLAST of mRNA_H-paniculata_contig2385.6448.1 vs. uniprot
Match: A0A2R2MU34_LINUN (Nuclear nucleic acid-binding protein C1D n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A2R2MU34_LINUN)

HSP 1 Score: 90.1 bits (222), Expect = 8.770e-17
Identity = 46/107 (42.99%), Postives = 69/107 (64.49%), Query Frame = 2

Query:   56 DTVRPLTLMSREEVGACVSPADRAKLNLQMAYGVTSLFYMFLKTQGVSPSNHPVKAELDRIKGYFGRLQKVGKPPEERKLKIDAEASRRFINSALSGDNVWRDAQAR 376
            DT++PL +    EV   ++P D AK+NL  AY V SLF+ +L  +G +P  HPVK ELDRI+GY  R++++ +  +E+  K+D  AS+RF+ SAL     W+ A A+
Sbjct:   32 DTLKPLLMTPLNEVHEKLNPLDCAKVNLVAAYAVNSLFWTYLNVRGENPKEHPVKQELDRIRGYMNRVKEIQE--KEKAPKLDKPASKRFVKSAL-----WQAAHAK 131

[Close]

BLAST of mRNA_H-paniculata_contig2385.6448.1 vs. uniprot
Match: A0A6B2LJS6_9EUKA (Nuclear nucleic acid-binding protein C1D n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LJS6_9EUKA)

HSP 1 Score: 88.2 bits (217), Expect = 2.670e-16
Identity = 41/95 (43.16%), Postives = 65/95 (68.42%), Query Frame = 2

Query:   56 DTVRPLTLMSREEVGACVSPADRAKLNLQMAYGVTSLFYMFLKTQGVSPSNHPVKAELDRIKGYFGRLQKVGKPPEERKLKIDAEASRRFINSAL 340
            + + PL      ++   ++P D AKLN+ +AY   +LFY+FLKTQGV  ++HPV  E++++K Y  +L+KV + PE  K++I+ EASRR I++AL
Sbjct:    6 NLLNPLFASKLSDLQTKLTPLDNAKLNITLAYTTYTLFYLFLKTQGVDTTDHPVINEINKVKSYIQKLKKVSEAPEGPKVRINQEASRRVISAAL 100

[Close]

BLAST of mRNA_H-paniculata_contig2385.6448.1 vs. uniprot
Match: A0A2D4BWA5_PYTIN (Nuclear nucleic acid-binding protein C1D n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWA5_PYTIN)

HSP 1 Score: 86.7 bits (213), Expect = 9.630e-16
Identity = 48/113 (42.48%), Postives = 75/113 (66.37%), Query Frame = 2

Query:   41 LSARLDTVRPLTLMSREEVGACVSPADRAKLNLQMAYGVTSLFYMFLKTQGVSPSN---HPVKAELDRIKGYFGRLQKVGKPPEERKLKIDAEASRRFINSALSGDNVWRDAQ 370
            L+A  + ++ L   S EE  A +SP ++AK+ + +AY + +L Y++LKTQGVS  +     VK ELDR+KG+  +++   +  +   LK+D EAS+RFIN+ALSGD V+ DA+
Sbjct:   16 LAAVEEHLQVLKNKSLEEFLAELSPIEKAKVQVSLAYSINALLYVYLKTQGVSSKDIRQTHVKQELDRVKGFIKKIKDTEELAKGPTLKLDKEASQRFINNALSGDQVYVDAK 128

[Close]

BLAST of mRNA_H-paniculata_contig2385.6448.1 vs. uniprot
Match: A0A485LE36_9STRA (Nuclear nucleic acid-binding protein C1D n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LE36_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.610e-15
Identity = 48/112 (42.86%), Postives = 70/112 (62.50%), Query Frame = 2

Query:   41 LSARLDTVRPLTLMSREEVGACVSPADRAKLNLQMAYGVTSLFYMFLKTQGVSPSN---HPVKAELDRIKGYFGRLQKVGKPPEERKLKIDAEASRRFINSALSGDNVWRDA 367
            LSA  + +  LT    EE+ A + P D+AK+ + +AY + +L Y+ LK QGVS  +     +K ELDR+KGY  +++   +  + RK +IDAEA+ RFIN ALS D V+ DA
Sbjct:   12 LSAVEEYLDILTQKPIEELTATLPPIDKAKVQVGLAYSINALLYVLLKAQGVSSKDIRTTQIKQELDRVKGYIQKIKYSEEMAKGRKARIDAEAAGRFINHALSSDQVYTDA 123

[Close]

BLAST of mRNA_H-paniculata_contig2385.6448.1 vs. uniprot
Match: UPI001F04DAC0 (nuclear nucleic acid-binding protein C1D-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04DAC0)

HSP 1 Score: 84.0 bits (206), Expect = 4.750e-15
Identity = 40/95 (42.11%), Postives = 64/95 (67.37%), Query Frame = 2

Query:   56 DTVRPLTLMSREEVGACVSPADRAKLNLQMAYGVTSLFYMFLKTQGVSPSNHPVKAELDRIKGYFGRLQKVGKPPEERKLKIDAEASRRFINSAL 340
            +T+ PL   S +E+   +   DRAKL+L + YG+ ++F+++L TQGV+P  H VK ELDRIK Y  +++ V +  ++  +KID +A+RRF+  AL
Sbjct:   31 ETLEPLLRSSNDELHEKLDVLDRAKLDLMVVYGINTMFWIYLITQGVNPKEHGVKHELDRIKNYMKKVKDVSER-KKASMKIDKDAARRFVKGAL 124

[Close]

BLAST of mRNA_H-paniculata_contig2385.6448.1 vs. uniprot
Match: A0A0L0GDR7_9EUKA (Nuclear nucleic acid-binding protein C1D n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GDR7_9EUKA)

HSP 1 Score: 83.6 bits (205), Expect = 1.410e-14
Identity = 40/93 (43.01%), Postives = 59/93 (63.44%), Query Frame = 2

Query:   62 VRPLTLMSREEVGACVSPADRAKLNLQMAYGVTSLFYMFLKTQGVSPSNHPVKAELDRIKGYFGRLQKVGKPPEERKLKIDAEASRRFINSAL 340
            + P+   ++EE+ A ++PA+RA+L L MAY  +S+F+M+L T GV P  H +K ELDR+K Y GRL++   P      K+D  A+ RFI   L
Sbjct:   30 LEPILNCNQEELKAKLTPAERAQLELAMAYAASSMFWMYLTTTGVDPRTHAIKGELDRVKAYMGRLKEATAPKNA--AKLDMAAAGRFIRGGL 120

[Close]

BLAST of mRNA_H-paniculata_contig2385.6448.1 vs. uniprot
Match: A0A024UHM0_9STRA (Nuclear nucleic acid-binding protein C1D n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UHM0_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.510e-14
Identity = 46/114 (40.35%), Postives = 71/114 (62.28%), Query Frame = 2

Query:   41 LSARLDTVRPLTLMSREEVGACVSPADRAKLNLQMAYGVTSLFYMFLKTQGVSPSNH---PVKAELDRIKGYFGRLQKVGKPPEERKLKIDAEASRRFINSALSGDNVWRDAQA 373
            L A  + +  LT    +E+ A ++P D+AK+ + +AY + +L Y+ LK QGVS  +     VK ELDR+KGY  +++   +  + RK ++DAEA+ RFIN ALS D V+ +A A
Sbjct:   12 LGAVEEYLNVLTTKPIDELTAELAPIDKAKVQVGLAYSINALLYVLLKVQGVSSKDGRQTQVKQELDRVKGYVQKIKYSEEMAKGRKTRVDAEAAGRFINHALSSDQVYAEAVA 125

[Close]

BLAST of mRNA_H-paniculata_contig2385.6448.1 vs. uniprot
Match: A0A8J4PQY2_9MYCE (Nuclear nucleic acid-binding protein C1D n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PQY2_9MYCE)

HSP 1 Score: 82.0 bits (201), Expect = 1.670e-14
Identity = 42/101 (41.58%), Postives = 69/101 (68.32%), Query Frame = 2

Query:   41 LSARLDTVRPLTLMSREEVGACVSPADRAKLNLQMAYGVTSLFYMFLKTQGVSPSNHPVKAELDRIKGYFGRLQKVGKPPEER-KLKIDAEASRRFINSAL 340
            L  +LD    ++L   +E    ++P + AKLN+ +AY + SLF+M+L+TQGVSP +H VK EL+RIK Y  +L+ +    EE+ K++ID++A++R I++ L
Sbjct:   24 LEGQLDPFFKVSLKEHQEK---LTPVESAKLNITVAYALNSLFFMYLQTQGVSPHDHQVKNELERIKPYILKLKSMTNKTEEKPKMQIDSDAAKRMIDNTL 121

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig2385.6448.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig2385.6448.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LNC5_ECTSI	2.630e-51	71.53	Nuclear nucleic acid-binding protein C1D n=1 Tax=E...	[more]
A0A835ZH36_9STRA	2.990e-17	47.92	Nuclear nucleic acid-binding protein C1D (Fragment...	[more]
A0A2R2MU34_LINUN	8.770e-17	42.99	Nuclear nucleic acid-binding protein C1D n=1 Tax=L...	[more]
A0A6B2LJS6_9EUKA	2.670e-16	43.16	Nuclear nucleic acid-binding protein C1D n=1 Tax=A...	[more]
A0A2D4BWA5_PYTIN	9.630e-16	42.48	Nuclear nucleic acid-binding protein C1D n=2 Tax=P...	[more]
A0A485LE36_9STRA	1.610e-15	42.86	Nuclear nucleic acid-binding protein C1D n=1 Tax=A...	[more]
UPI001F04DAC0	4.750e-15	42.11	nuclear nucleic acid-binding protein C1D-like n=1 ...	[more]
A0A0L0GDR7_9EUKA	1.410e-14	43.01	Nuclear nucleic acid-binding protein C1D n=1 Tax=S...	[more]
A0A024UHM0_9STRA	1.510e-14	40.35	Nuclear nucleic acid-binding protein C1D n=1 Tax=A...	[more]
A0A8J4PQY2_9MYCE	1.670e-14	41.58	Nuclear nucleic acid-binding protein C1D n=1 Tax=P...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig2385	contig	H-paniculata_contig2385:4346..8785 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	181.0
Seed ortholog evalue	5e-43
Seed eggNOG ortholog	2880.D8LNC5
Preferred name	C1D
KEGG ko	ko:K12592
KEGG Pathway	ko03018,map03018
Hectar predicted targeting category	other localisation
GOs	GO:0000176,GO:0000178,GO:0000459,GO:0000460,GO:0000466,GO:0000467,GO:0000469,GO:0000956,GO:0000972,GO:0000973,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003712,GO:0003714,GO:0003723,GO:0003725,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006402,GO:0006403,GO:0006725,GO:0006807,GO:0006996,GO:0008134,GO:0008150,GO:0008152,GO:0008298,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016074,GO:0016075,GO:0016078,GO:0016180,GO:0016922,GO:0017053,GO:0019219,GO:0019222,GO:0019439,GO:0022613,GO:0030234,GO:0031123,GO:0031125,GO:0031126,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032069,GO:0032991,GO:0033036,GO:0034470,GO:0034472,GO:0034475,GO:0034476,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0035257,GO:0042254,GO:0043144,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043628,GO:0043632,GO:0043633,GO:0043634,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051179,GO:0051252,GO:0051253,GO:0051276,GO:0051336,GO:0051427,GO:0051641,GO:0060255,GO:0060700,GO:0065007,GO:0065009,GO:0070013,GO:0070651,GO:0070727,GO:0071025,GO:0071027,GO:0071028,GO:0071029,GO:0071033,GO:0071034,GO:0071035,GO:0071038,GO:0071039,GO:0071042,GO:0071043,GO:0071046,GO:0071047,GO:0071051,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0098772,GO:0140110,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901917,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1905354,GO:1905777,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.	maturation of 5.8S rRNA
EggNOG OGs	KOG4835@1,KOG4835@2759
Ec32 ortholog description	Exosome-associated factor Rrp47/DNA strand repair C1D
Ec32 ortholog	Ec-04_004370.1
COG Functional cat.	H
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko03019
Exons	3
Model size	3218
Cds size	561
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig2385.6448.1	prot_H-paniculata_contig2385.6448.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig2385 5017..6207 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929680.6197357-UTR-H-paniculata_contig2385:4345..4405	1622929680.6197357-UTR-H-paniculata_contig2385:4345..4405	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig2385 4346..4405 +
1691480964.6794808-UTR-H-paniculata_contig2385:4345..4405	1691480964.6794808-UTR-H-paniculata_contig2385:4345..4405	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig2385 4346..4405 +
1622929680.6309917-UTR-H-paniculata_contig2385:4997..5016	1622929680.6309917-UTR-H-paniculata_contig2385:4997..5016	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig2385 4998..5016 +
1691480964.6962736-UTR-H-paniculata_contig2385:4997..5016	1691480964.6962736-UTR-H-paniculata_contig2385:4997..5016	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig2385 4998..5016 +
1622929680.6763678-UTR-H-paniculata_contig2385:6207..8785	1622929680.6763678-UTR-H-paniculata_contig2385:6207..8785	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig2385 6208..8785 +
1691480964.7295325-UTR-H-paniculata_contig2385:6207..8785	1691480964.7295325-UTR-H-paniculata_contig2385:6207..8785	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig2385 6208..8785 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929680.6448991-CDS-H-paniculata_contig2385:5016..5177	1622929680.6448991-CDS-H-paniculata_contig2385:5016..5177	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig2385 5017..5177 +
1691480964.709055-CDS-H-paniculata_contig2385:5016..5177	1691480964.709055-CDS-H-paniculata_contig2385:5016..5177	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig2385 5017..5177 +
1622929680.6563697-CDS-H-paniculata_contig2385:5807..6207	1622929680.6563697-CDS-H-paniculata_contig2385:5807..6207	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig2385 5808..6207 +
1691480964.718194-CDS-H-paniculata_contig2385:5807..6207	1691480964.718194-CDS-H-paniculata_contig2385:5807..6207	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig2385 5808..6207 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig2385:4346..8785+
coding sequence from alignment at H-paniculata_contig2385:4346..8785+

protein sequence of mRNA_H-paniculata_contig2385.6448.1

>prot_H-paniculata_contig2385.6448.1 ID=prot_H-paniculata_contig2385.6448.1|Name=mRNA_H-paniculata_contig2385.6448.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=187bp
MSREEVGACVSPADRAKLNLQMAYGVTSLFYMFLKTQGVSPSNHPVKAEL
DRIKGYFGRLQKVGKPPEERKLKIDAEASRRFINSALSGDNVWRDAQARN
GSNSLPGSSAGAGIGRSNPAGQPVNNSAQDGDKFVFVGIPLGTGRKKRGL
LSGRAKDDNGDADDDDSSKKATNKKSKHNVSRSHKK*

mRNA from alignment at H-paniculata_contig2385:4346..8785+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig2385.6448.1 ID=mRNA_H-paniculata_contig2385.6448.1|Name=mRNA_H-paniculata_contig2385.6448.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4440bp|location=Sequence derived from alignment at H-paniculata_contig2385:4346..8785+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCGGCGAAGAGACGAGTGGCATAGAAACCTTGAAGAATTTTGAGCGCGC
GCTTGGACACGTGCGTAACAGGTACTGACGATCCCTGTCCAAGTGTGGTG
CGGCTGTACAGTGTACCAATACCAATAAAGAGTAGGTAGTCCTGGTGCGG
AGAGCTATCGGATGTGTTGATGAATGATGCTGCAGGGATTCACGTGATGT
TACGGTCTTCATGCGCTGATAGACCTATGTGCAGCATGAAAGTGTGTATG
GCTTTATTAGAAAAGCCTTCGTGATTTGGTGTGGAAGCGATAGCTTTACT
CTATCATAAGAGAAAGTACTTGGAATTTGACATGGATGCTCTGTCGCCTA
CACCATAAAGAACAATCGGACACCACAGGTACATGGCGTCTATTTAGGTC
CATATTCGACAACGTTCTACGTGCCGATGCCAGGTGCACAGGCTACACAC
ACTCCATGGCCTCGTTTACCGCTTTCCTGACTCTAGTTGATGGAATGCAG
CATCTTATATATATTACTGCACCATCGTCCTCAATACGTGTTCCCCCGCA
CAAGTGTTTCGTGGAGAGGTCCGGCACGTGCCGCCGTTCCCCCCCCCGAT
ATCCTTATCCTCGTCCTCCAATACACGCACCAATCGTTATTTTGACCGTC
AGCGTTAGGCCGCTGACGCTTATGAGCCGGGAGGAAGTCGGTGCTTGCGT
TAGCCCTGCCGACCGTGCCAAGCTAAACCTACAGATGGCCTATGGCGTCA
CGTCCCTGTTCTACATGTTTTTGAAGACCCAGGGCGTGTCACCCTCGAAC
CATCCCGTCAAAGCAGAACTTGATCGGATAAAGTGAGTTTTTTCCTATCG
CCATAGCTGACACTATATTTACTTTCTTGTGCTCATGCAGACTCGATACG
AGGCTCGCTATCGCATCACATTGTCACAACAGACAGTGCGGTGCGGTGCG
GTCCGGTGGTAGATAGCACGCATCTACTGTGTGTGTTTGTGGCTTGTCGT
CTGCATATTGATATTGGTACATTGACTACAGACAGGTAACTTCAACGAAT
ATCGTTGAGAGCCAAAATAAGCAGGTTGGATAGCATTTGACCCAAGTAGG
TATTATGAGACTTGGAAGATACCAACCAATGACGATACTTTTGTCAGACG
TTAGCTTAATATGTTCACTTGTATTTCCTAGAATCAGAAGATAAATGTGA
CCTGCGAGTTGACCTCCTCCGTTTCTATGATAAGCGAGAAATTCCGCTCT
CTGCGTCAGTCGCCGGAGCTAATTCAGTTCCTTTCTAACTTTTGCACAAC
CAAAATCGGTTCACCCCGCACATATATCCCCTCCCTCGTTGTTTTTTGTA
CCTCTTAGGAGCGTTTGTTTTCATTATACCTGTTCTGATAATTCACTTAC
CCTCTACGTACGTCCTTGACAATTGTCGCGTAACACATGGGGTGGACTAT
GATGATGCGAAGAGGGTACTTCGGACGTCTTCAAAAGGTGGGCAAGCCGC
CGGAAGAGCGCAAGCTCAAGATCGACGCCGAGGCTAGCCGACGCTTCATC
AACAGCGCGCTTTCAGGCGACAACGTCTGGAGAGATGCGCAGGCCCGAAA
CGGGTCGAATTCCTTGCCAGGCTCATCGGCGGGTGCTGGTATTGGACGTA
GTAATCCCGCAGGGCAGCCGGTCAACAACAGCGCCCAGGATGGAGACAAG
TTTGTATTTGTGGGTATACCGCTCGGAACAGGGCGAAAGAAACGAGGATT
GCTGAGTGGACGGGCGAAAGATGACAACGGTGACGCTGATGATGATGACT
CTTCAAAGAAGGCTACGAATAAGAAATCTAAGCATAACGTGTCGCGATCG
CATAAGAAATGATTTACCTGGCATTCGTGTATACATTATGGCTTCAAATT
TGCCGGGGGGCGGTGATCGGTGTAGAGCTCAAATCTTGACTCCTTTGGGG
CGCCATTATGACGAGAACACTTATCTCGCGGCTTTAACCCTTCGCGCAGG
TGTTGTGTGTATGTTCAAACGTTCGTACAGGGCCCGTTACCACAGGAGTT
AAGAGGCCAAGTGTTGCAGTCGTTGCGTGGCACCATGCTAACTCCCTATT
TGTGCTGTATTTTTTGTTCGGACTGGCTGTCTGAACGATAGCGACTCTCT
CCCATGACCACTTCATACACCTTATTCCCTGATTTTCAGGTGGGCGTTGG
GTGGTTAAGTGGAAGCCGGCACATAACGAGTTGATTGCTACACACGTAGT
CAGAGGGTACCTTGTGGGTACCTTGTTGCGGATATCACAATGTACCCACA
TTGCGGTGAAGTTGACATTGGGCATAATTTGTTTTATGACGTTGTGTGTA
CACTGTCAACCTCACCACAGCTTGGACGTTGGGATATCCGCAACAAGGTA
CGCCTCTGGCCACGGTTCTATCGGTGCACTATGTTGCTGTCATAATGCCC
CCCATTCATGAAATATTGGTCATACGGATGTTGTTTGTCCATTCTAAGGA
TTTGATGTGGGGTCCAGTCTAGAATCAGCGAGATTTGAAAACGGGAAAAT
CTTTAGAATCTTCTCGGTAGTAATACTAAGGGAAAACATTGCTGTATTGC
ACGGAATTCGGTATTGGCTACCGATACTGTGAAAAAGTCGTCTTCCCGTT
AACGGTCACCATGCATGGTACAGCCAAACATAATTATCACGGCGTCAGTG
ACATTTCCCGTTTACCGTACCCTGAAACCTCGTTACGGTACTGATGCTGT
GCCTTCAAACTAAAAACTTTATAAGTCGTTAAAGCGAGCTCTCGGAATGA
GAGAGTTACCTCCTTGTGGGACTCCCCGTACACATCATATACTACGCACA
TGGTTATATAGCAGTATTGTATAACTTGCGCTTGAGCAAAGCTTGGGCAC
CTAAATACTGTGCCAAATATTGATACCTTACCGCATAATGCCGAAAAGAC
GAAAACTATACCGTACCACGCGCGGGGAAACAACCGAATACCTCTTACCC
CACAAATATCGAAAAATCTGTATACCGTACCGTGCCGTGCTACCGATATA
CCGAATATCGAGTACTGACATGATACCGAAAAAGTAGTTTTACCGTTCTG
TTTATTCTTTTTCACAAAACCACTATCGAGAACACCCCTGAAAAACCTTG
CTGCGAACGAAATACCAAATTCGAAGGAATGCCAAGACTGTATTTGCAGA
CATTATCCAAAGTAATCACATAGGAAAAATGACACAGCTCTTGAGTGAAA
CAACAAAGAAGCGAAAAATGATGACCATGAAAACAACAAAAGGAATATGA
CGTATAACAACATCCTAACCATTTGATCGGCTATGATCGGTCACACCTCA
TTATTGGTTGCGACCGTAGTTTATGATACTTTCATTCGACCGATTCACCC
ATGCAGGCATCCAATTGGTGTGGCACCCCCGGTGAAAAATGCAGAAGTTC
TTAAGGGGGCCTAATCCAAGCCCTTTTTTGTGTGTAAATTGTCGACGTAT
GCACACACGGTGAAGATACTCCGCCAATATTAGTGTGTATACGTCATCGA
ATTTCCAAGCCATTCGCAACAAACACTACAACTCATCGAGTCGTATACAC
ATCGTAAACACACTCCGCCCCCGGTGCCTGCAAAACAACACAAAAAAGAG
GCTACCATCAATCGGCTAAAGCGACAAGAACTCCAGTATTCTTTCCTGCG
AAGACATGCACGTAGGAACGGACAGGCAGACGTAGGCATAAACGTGAACC
AAACTCCGTTTCTATGTTACTCCGGCCTATGATGCCGTTCAAAATCTGCA
CACAGACACCCAGCAGCCGCGCAACTGAGGCTTTATTCTCACACACCTAC
AAGTCTCGATTTCTACAAAAAAAGAAAAGCTTTCCCGTGTACGGCGATCG
CTTTTGGGGTAATGCAGTCGCTAAATCCACGCTGAGCCTACATCGAACAT
GCAACCTGGATAGGATGCCTACTCTACAGTTGAACTAGCAGAGAGAATGA
AGATGCCTGCAGTTTTCATGTCATATTTTCACATTATAATCCTATCGAAT
GATAACAGTCGTCTATGGCGAAGATTACCTTCAGACAAATTGACTTCATC
GATCGATCATGGTTTTTCGGCCACTCGGGTCATTCCTTGAAAAAAAATCT
CACCGAGAACAAAAAGTACTATTTCTCAGGTCATTCCTTGAAAAAAAAAC
TCACCAAGAAACAAAAGCACTGCTATCTTCGTCTCTTTCTACTGTCAACG
GTCGAGTATCCGACGTCCAACCCTTCACAAAGGATCCTTAGGTCGCATCG
ACTAATTTATCAAAAGCTGCCGAATGCGCTAACGCTACAAATAAACATTA
ATTTGTCGAAAATCTTCCACTGCGTGTACCATACGTCATCATCTACTACT
TGCCATCTTACTCGTTAAAGGTCGACTCTCGGTCTGATGG

Coding sequence (CDS) from alignment at H-paniculata_contig2385:4346..8785+

>mRNA_H-paniculata_contig2385.6448.1 ID=mRNA_H-paniculata_contig2385.6448.1|Name=mRNA_H-paniculata_contig2385.6448.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1122bp|location=Sequence derived from alignment at H-paniculata_contig2385:4346..8785+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGCCGGGAGGAAGTCGGTGCTTGCGTTAGCCCTGCCGACCGTGCCAA
GCTAAACCTACAGATGGCCTATGGCGTCACGTCCCTGTTCTACATGTTTT
TGAAGACCCAGGGCGTGTCACCCTCGAACCATCCCGTCAAAGCAGAACTT
GATCGGATAAAATGAGCCGGGAGGAAGTCGGTGCTTGCGTTAGCCCTGCC
GACCGTGCCAAGCTAAACCTACAGATGGCCTATGGCGTCACGTCCCTGTT
CTACATGTTTTTGAAGACCCAGGGCGTGTCACCCTCGAACCATCCCGTCA
AAGCAGAACTTGATCGGATAAAAGGGTACTTCGGACGTCTTCAAAAGGTG
GGCAAGCCGCCGGAAGAGCGCAAGCTCAAGATCGACGCCGAGGCTAGCCG
ACGCTTCATCAACAGCGCGCTTTCAGGCGACAACGTCTGGAGAGATGCGC
AGGCCCGAAACGGGTCGAATTCCTTGCCAGGCTCATCGGCGGGTGCTGGT
ATTGGACGTAGTAATCCCGCAGGGCAGCCGGTCAACAACAGCGCCCAGGA
TGGAGACAAGTTTGTATTTGTGGGTATACCGCTCGGAACAGGGCGAAAGA
AACGAGGATTGCTGAGTGGACGGGCGAAAGATGACAACGGTGACGCTGAT
GATGATGACTCTTCAAAGAAGGCTACGAATAAGAAATCTAAGCATAACGT
GTCGCGATCGCATAAGAAATGAAGGGTACTTCGGACGTCTTCAAAAGGTG
GGCAAGCCGCCGGAAGAGCGCAAGCTCAAGATCGACGCCGAGGCTAGCCG
ACGCTTCATCAACAGCGCGCTTTCAGGCGACAACGTCTGGAGAGATGCGC
AGGCCCGAAACGGGTCGAATTCCTTGCCAGGCTCATCGGCGGGTGCTGGT
ATTGGACGTAGTAATCCCGCAGGGCAGCCGGTCAACAACAGCGCCCAGGA
TGGAGACAAGTTTGTATTTGTGGGTATACCGCTCGGAACAGGGCGAAAGA
AACGAGGATTGCTGAGTGGACGGGCGAAAGATGACAACGGTGACGCTGAT
GATGATGACTCTTCAAAGAAGGCTACGAATAAGAAATCTAAGCATAACGT
GTCGCGATCGCATAAGAAATGA